RNA–Protein interactions for RNA: ENST00000479051.1

VARS-224, Transcript of valyl-tRNA synthetase, humanhuman

TSL 3

Gene VARS, Length 612 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VARS-224ENST00000479051 LRRC8DQ7L1W4 858 aa23.04■■□□□ 1.28
VARS-224ENST00000479051 TTC12Q9H892 705 aaPredicted RBP23.04■■□□□ 1.28
VARS-224ENST00000479051 IL23AQ9NPF7 189 aa23.04■■□□□ 1.28
VARS-224ENST00000479051 FOXD4L1Q9NU39 408 aa23.04■■□□□ 1.28
VARS-224ENST00000479051 TRIP12Q14669 1992 aaPredicted RBP23.03■■□□□ 1.28
VARS-224ENST00000479051 MBLAC1A4D2B0 266 aaPredicted RBP23.03■■□□□ 1.28
VARS-224ENST00000479051 OATP04181 439 aa23.03■■□□□ 1.28
VARS-224ENST00000479051 PFKMP08237 780 aa23.03■■□□□ 1.28
VARS-224ENST00000479051 OR52Z1P0C646 297 aa23.03■■□□□ 1.28
VARS-224ENST00000479051 TXKP42681 527 aa23.03■■□□□ 1.28
VARS-224ENST00000479051 PRKCEQ02156 737 aa23.03■■□□□ 1.28
VARS-224ENST00000479051 SCLYQ96I15 445 aa23.03■■□□□ 1.28
VARS-224ENST00000479051 MTMR9Q96QG7 549 aa23.03■■□□□ 1.28
VARS-224ENST00000479051 PSMC5P62195 406 aa23.02■■□□□ 1.28
VARS-224ENST00000479051 EPHA7Q15375 998 aa23.02■■□□□ 1.28
VARS-224ENST00000479051 TRIM71Q2Q1W2 868 aaKnown RBP23.02■■□□□ 1.28
VARS-224ENST00000479051 BRAPQ7Z569 592 aa23.02■■□□□ 1.28
VARS-224ENST00000479051 EML1O00423 815 aa23.01■■□□□ 1.27
VARS-224ENST00000479051 P4HBP07237 508 aaKnown RBP23.01■■□□□ 1.27
VARS-224ENST00000479051 ATP4AP20648 1035 aa23.01■■□□□ 1.27
VARS-224ENST00000479051 QARSP47897 775 aaKnown RBP23.01■■□□□ 1.27
VARS-224ENST00000479051 TMEM266Q2M3C6 531 aa23.01■■□□□ 1.27
VARS-224ENST00000479051 TRMT1LQ7Z2T5 733 aaKnown RBP23.01■■□□□ 1.27
VARS-224ENST00000479051 WNT8BQ93098 351 aa23.01■■□□□ 1.27
VARS-224ENST00000479051 MTIF3Q9H2K0 278 aaKnown RBP23.01■■□□□ 1.27
VARS-224ENST00000479051 TMEM60Q9H2L4 133 aa23.01■■□□□ 1.27
VARS-224ENST00000479051 PCDHA2Q9Y5H9 948 aa23.01■■□□□ 1.27
VARS-224ENST00000479051 TANC1Q9C0D5 1861 aa23■■□□□ 1.27
VARS-224ENST00000479051 RSPH10B2B2RC85 870 aa23■■□□□ 1.27
VARS-224ENST00000479051 LAD1O00515 517 aa23■■□□□ 1.27
VARS-224ENST00000479051 RSPH10BP0C881 870 aa23■■□□□ 1.27
VARS-224ENST00000479051 SYT1P21579 422 aa23■■□□□ 1.27
VARS-224ENST00000479051 TOB1P50616 345 aaPredicted RBP23■■□□□ 1.27
VARS-224ENST00000479051 UGCGQ16739 394 aa23■■□□□ 1.27
VARS-224ENST00000479051 XKR3Q5GH77 459 aa23■■□□□ 1.27
VARS-224ENST00000479051 HABP4Q5JVS0 413 aaKnown RBP23■■□□□ 1.27
VARS-224ENST00000479051 MARCH8Q5T0T0 291 aa23■■□□□ 1.27
VARS-224ENST00000479051 ZNF618Q5T7W0 954 aa23■■□□□ 1.27
VARS-224ENST00000479051 RPAINQ86UA6 219 aa23■■□□□ 1.27
VARS-224ENST00000479051 BANK1Q8NDB2 785 aa23■■□□□ 1.27
VARS-224ENST00000479051 NEK9Q8TD19 979 aa23■■□□□ 1.27
VARS-224ENST00000479051 ZNF862O60290 1169 aa22.99■■□□□ 1.27
VARS-224ENST00000479051 ACRP10323 421 aa22.99■■□□□ 1.27
VARS-224ENST00000479051 ACTN1P12814 892 aa22.99■■□□□ 1.27
VARS-224ENST00000479051 KLRC1P26715 233 aa22.99■■□□□ 1.27
VARS-224ENST00000479051 EPHB4P54760 987 aa22.99■■□□□ 1.27
VARS-224ENST00000479051 SPIRE1Q08AE8 756 aa22.99■■□□□ 1.27
VARS-224ENST00000479051 MTHFD1LQ6UB35 978 aa22.99■■□□□ 1.27
VARS-224ENST00000479051 DEFB128Q7Z7B8 93 aa22.99■■□□□ 1.27
VARS-224ENST00000479051 TRAPPC12Q8WVT3 735 aa22.99■■□□□ 1.27
VARS-224ENST00000479051 RNPC3Q96LT9 517 aaKnown RBP22.99■■□□□ 1.27
VARS-224ENST00000479051 FTOQ9C0B1 505 aaKnown RBP eCLIP22.99■■□□□ 1.27
VARS-224ENST00000479051 SEPT9Q9UHD8 586 aaPredicted RBP22.99■■□□□ 1.27
VARS-224ENST00000479051 PCDHB6Q9Y5E3 794 aa22.99■■□□□ 1.27
VARS-224ENST00000479051 M0QZ92 97 aa22.98■■□□□ 1.27
VARS-224ENST00000479051 MAGEB2O15479 319 aa22.98■■□□□ 1.27
VARS-224ENST00000479051 FGBP02675 491 aa22.98■■□□□ 1.27
VARS-224ENST00000479051 PDIA4P13667 645 aaKnown RBP22.98■■□□□ 1.27
VARS-224ENST00000479051 NBR1Q14596 966 aa22.98■■□□□ 1.27
VARS-224ENST00000479051 SHHQ15465 462 aa22.98■■□□□ 1.27
VARS-224ENST00000479051 RUFY4Q6ZNE9 571 aa22.98■■□□□ 1.27
VARS-224ENST00000479051 ERMNQ8TAM6 284 aa22.98■■□□□ 1.27
VARS-224ENST00000479051 BUD13Q9BRD0 619 aaKnown RBP eCLIP22.98■■□□□ 1.276e-6■■□□□ 12.7
VARS-224ENST00000479051 RAB34Q9BZG1 259 aa22.98■■□□□ 1.27
VARS-224ENST00000479051 FAM49AQ9H0Q0 323 aaPredicted RBP22.98■■□□□ 1.27
VARS-224ENST00000479051 ZSWIM4Q9H7M6 989 aa22.98■■□□□ 1.27
VARS-224ENST00000479051 WDR81Q562E7 1941 aa22.98■■□□□ 1.27
VARS-224ENST00000479051 SMIM35A0A1B0GVV1 85 aa22.97■■□□□ 1.27
VARS-224ENST00000479051 DDX11L8A8MPP1 907 aa22.97■■□□□ 1.27
VARS-224ENST00000479051 CTSHP09668 335 aa22.97■■□□□ 1.27
VARS-224ENST00000479051 TECP42680 631 aa22.97■■□□□ 1.27
VARS-224ENST00000479051 PTGDRQ13258 359 aa22.97■■□□□ 1.27
VARS-224ENST00000479051 TMEM240Q5SV17 173 aa22.97■■□□□ 1.27
VARS-224ENST00000479051 C9orf50Q5SZB4 431 aa22.97■■□□□ 1.27
VARS-224ENST00000479051 IER5Q5VY09 327 aa22.97■■□□□ 1.27
VARS-224ENST00000479051 ZNF365Q70YC5 407 aa22.97■■□□□ 1.27
VARS-224ENST00000479051 NME8Q8N427 588 aa22.97■■□□□ 1.27
VARS-224ENST00000479051 DNAJB3Q8WWF6 145 aa22.97■■□□□ 1.27
VARS-224ENST00000479051 LXNQ9BS40 222 aa22.97■■□□□ 1.27
VARS-224ENST00000479051 EIF4ENIF1Q9NRA8 985 aaKnown RBP22.97■■□□□ 1.27
VARS-224ENST00000479051 STX6O43752 255 aa22.96■■□□□ 1.27
VARS-224ENST00000479051 TMOD1P28289 359 aa22.96■■□□□ 1.27
VARS-224ENST00000479051 FERMT3Q86UX7 667 aa22.96■■□□□ 1.27
VARS-224ENST00000479051 C4orf19Q8IY42 314 aa22.96■■□□□ 1.27
VARS-224ENST00000479051 DYDC2Q96IM9 177 aa22.96■■□□□ 1.27
VARS-224ENST00000479051 EIF2AK1Q9BQI3 630 aaKnown RBP22.96■■□□□ 1.27
VARS-224ENST00000479051 NIFKQ9BYG3 293 aaKnown RBP22.96■■□□□ 1.27
VARS-224ENST00000479051 POTEMA6NI47 508 aa22.95■■□□□ 1.26
VARS-224ENST00000479051 ZBTB42B2RXF5 422 aa22.95■■□□□ 1.26
VARS-224ENST00000479051 C22orf31O95567 290 aa22.95■■□□□ 1.26
VARS-224ENST00000479051 BMP15O95972 392 aa22.95■■□□□ 1.26
VARS-224ENST00000479051 PRPHP41219 470 aa22.95■■□□□ 1.26
VARS-224ENST00000479051 CYP4A11Q02928 519 aa22.95■■□□□ 1.26
VARS-224ENST00000479051 TBC1D8BQ0IIM8 1120 aa22.95■■□□□ 1.26
VARS-224ENST00000479051 BECN1Q14457 450 aa22.95■■□□□ 1.26
VARS-224ENST00000479051 LRIT3Q3SXY7 679 aa22.95■■□□□ 1.26
VARS-224ENST00000479051 MTERF2Q49AM1 385 aa22.95■■□□□ 1.26
VARS-224ENST00000479051 FAM26DQ5JW98 314 aa22.95■■□□□ 1.26
VARS-224ENST00000479051 C16orf59Q7L2K0 433 aa22.95■■□□□ 1.26
VARS-224ENST00000479051 OTUD6AQ7L8S5 288 aa22.95■■□□□ 1.26
Retrieved 100 of 20,778 RNA–protein pairs in 17.6 ms