RNA–Protein interactions for RNA: ENST00000477477.1

HDLBP-236, Transcript of high density lipoprotein binding protein, humanhuman

TSL 5

Gene HDLBP, Length 340 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDLBP-236ENST00000477477 C11orf84Q9BUA3 381 aaPredicted RBP12.95□□□□□ -0.34
HDLBP-236ENST00000477477 FTHL17Q9BXU8 183 aa12.95□□□□□ -0.34
HDLBP-236ENST00000477477 LMAN2LQ9H0V9 348 aa12.95□□□□□ -0.34
HDLBP-236ENST00000477477 CD320Q9NPF0 282 aa12.95□□□□□ -0.34
HDLBP-236ENST00000477477 IGSF9BQ9UPX0 1349 aa12.94□□□□□ -0.34
HDLBP-236ENST00000477477 KDM3AQ9Y4C1 1321 aa12.94□□□□□ -0.34
HDLBP-236ENST00000477477 CCDC196A0A1B0GTZ2 297 aa12.94□□□□□ -0.34
HDLBP-236ENST00000477477 FAM86B1E9PN63 330 aa12.94□□□□□ -0.34
HDLBP-236ENST00000477477 H3BQ06 376 aaPredicted RBP12.94□□□□□ -0.34
HDLBP-236ENST00000477477 DDX39AO00148 427 aaKnown RBP12.94□□□□□ -0.34
HDLBP-236ENST00000477477 GRM6O15303 877 aa12.94□□□□□ -0.34
HDLBP-236ENST00000477477 FAM86B2P0C5J1 330 aa12.94□□□□□ -0.34
HDLBP-236ENST00000477477 SCG2P13521 617 aa12.94□□□□□ -0.34
HDLBP-236ENST00000477477 ADD1P35611 737 aaKnown RBP12.94□□□□□ -0.34
HDLBP-236ENST00000477477 ZNF76P36508 570 aa12.94□□□□□ -0.34
HDLBP-236ENST00000477477 METAP2P50579 478 aaKnown RBP eCLIP12.94□□□□□ -0.345e-15■□□□□ 8.5
HDLBP-236ENST00000477477 TMEM62Q0P6H9 643 aa12.94□□□□□ -0.34
HDLBP-236ENST00000477477 PAK2Q13177 524 aa12.94□□□□□ -0.34
HDLBP-236ENST00000477477 BTG3Q14201 252 aaPredicted RBP12.94□□□□□ -0.34
HDLBP-236ENST00000477477 PUS10Q3MIT2 529 aaKnown RBP12.94□□□□□ -0.34
HDLBP-236ENST00000477477 JAKMIP3Q5VZ66 844 aa12.94□□□□□ -0.34
HDLBP-236ENST00000477477 MTHFD1LQ6UB35 978 aa12.94□□□□□ -0.34
HDLBP-236ENST00000477477 ABHD15Q6UXT9 468 aa12.94□□□□□ -0.34
HDLBP-236ENST00000477477 RTN4RL1Q86UN2 441 aaPredicted RBP12.94□□□□□ -0.34
HDLBP-236ENST00000477477 PLA2G4DQ86XP0 818 aa12.94□□□□□ -0.34
HDLBP-236ENST00000477477 NPAS4Q8IUM7 802 aa12.94□□□□□ -0.34
HDLBP-236ENST00000477477 NME8Q8N427 588 aa12.94□□□□□ -0.34
HDLBP-236ENST00000477477 CRYGNQ8WXF5 182 aa12.94□□□□□ -0.34
HDLBP-236ENST00000477477 KCNB2Q92953 911 aa12.94□□□□□ -0.34
HDLBP-236ENST00000477477 CELF4Q9BZC1 486 aaKnown RBP12.94□□□□□ -0.34
HDLBP-236ENST00000477477 NAP1L2Q9ULW6 460 aaPredicted RBP12.94□□□□□ -0.34
HDLBP-236ENST00000477477 NID2Q14112 1375 aa12.94□□□□□ -0.34
HDLBP-236ENST00000477477 RALGAPA2Q2PPJ7 1873 aa12.93□□□□□ -0.34
HDLBP-236ENST00000477477 KAT6AQ92794 2004 aa12.93□□□□□ -0.34
HDLBP-236ENST00000477477 IGLV3-22A0A075B6J6 115 aa12.93□□□□□ -0.34
HDLBP-236ENST00000477477 ESYT2A0FGR8 921 aa12.93□□□□□ -0.34
HDLBP-236ENST00000477477 GRXCR2A6NFK2 248 aa12.93□□□□□ -0.34
HDLBP-236ENST00000477477 BACH1O14867 736 aa12.93□□□□□ -0.34
HDLBP-236ENST00000477477 HBP1O60381 514 aa12.93□□□□□ -0.34
HDLBP-236ENST00000477477 CYP3A4P08684 503 aa12.93□□□□□ -0.34
HDLBP-236ENST00000477477 CPA1P15085 419 aa12.93□□□□□ -0.34
HDLBP-236ENST00000477477 KLRC1P26715 233 aa12.93□□□□□ -0.34
HDLBP-236ENST00000477477 FGD1P98174 961 aa12.93□□□□□ -0.34
HDLBP-236ENST00000477477 KRT76Q01546 638 aa12.93□□□□□ -0.34
HDLBP-236ENST00000477477 APOBRQ0VD83 1088 aa12.93□□□□□ -0.34
HDLBP-236ENST00000477477 TMEM31Q5JXX7 168 aa12.93□□□□□ -0.34
HDLBP-236ENST00000477477 FAM160B1Q5W0V3 765 aa12.93□□□□□ -0.34
HDLBP-236ENST00000477477 CCDC60Q8IWA6 550 aaPredicted RBP12.93□□□□□ -0.34
HDLBP-236ENST00000477477 CMTR2Q8IYT2 770 aaKnown RBP12.93□□□□□ -0.34
HDLBP-236ENST00000477477 GJD3Q8N144 294 aa12.93□□□□□ -0.34
HDLBP-236ENST00000477477 CRIPAKQ8N1N5 446 aa12.93□□□□□ -0.34
HDLBP-236ENST00000477477 ATP8B4Q8TF62 1192 aa12.93□□□□□ -0.34
HDLBP-236ENST00000477477 LRFN3Q9BTN0 628 aa12.93□□□□□ -0.34
HDLBP-236ENST00000477477 PLVAPQ9BX97 442 aa12.93□□□□□ -0.34
HDLBP-236ENST00000477477 ZMYND12Q9H0C1 365 aa12.93□□□□□ -0.34
HDLBP-236ENST00000477477 PADI3Q9ULW8 664 aa12.93□□□□□ -0.34
HDLBP-236ENST00000477477 PI4K2BG5E9Z4 385 aa12.92□□□□□ -0.34
HDLBP-236ENST00000477477 ADAMTS3O15072 1205 aa12.92□□□□□ -0.34
HDLBP-236ENST00000477477 DHX15O43143 795 aaKnown RBP12.92□□□□□ -0.34
HDLBP-236ENST00000477477 NCK2O43639 380 aa12.92□□□□□ -0.34
HDLBP-236ENST00000477477 MMP1P03956 469 aa12.92□□□□□ -0.34
HDLBP-236ENST00000477477 STAG3L1P0CL83 205 aa12.92□□□□□ -0.34
HDLBP-236ENST00000477477 HSPA4P34932 840 aa12.92□□□□□ -0.34
HDLBP-236ENST00000477477 TTC3P53804 2025 aa12.92□□□□□ -0.34
HDLBP-236ENST00000477477 SETQ01105 290 aaPredicted RBP12.92□□□□□ -0.34
HDLBP-236ENST00000477477 PKN1Q16512 942 aa12.92□□□□□ -0.34
HDLBP-236ENST00000477477 MCTP2Q6DN12 878 aa12.92□□□□□ -0.34
HDLBP-236ENST00000477477 MIS18BP1Q6P0N0 1132 aa12.92□□□□□ -0.34
HDLBP-236ENST00000477477 PDXDC2PQ6P474 469 aa12.92□□□□□ -0.34
HDLBP-236ENST00000477477 EP400NLQ6ZTU2 488 aa12.92□□□□□ -0.34
HDLBP-236ENST00000477477 Q6ZUG5 572 aa12.92□□□□□ -0.34
HDLBP-236ENST00000477477 NLRC5Q86WI3 1866 aa12.92□□□□□ -0.34
HDLBP-236ENST00000477477 BRF1Q92994 677 aa12.92□□□□□ -0.34
HDLBP-236ENST00000477477 JAKMIP1Q96N16 626 aaKnown RBP12.92□□□□□ -0.34
HDLBP-236ENST00000477477 TMX1Q9H3N1 280 aa12.92□□□□□ -0.34
HDLBP-236ENST00000477477 C11orf16Q9NQ32 467 aa12.92□□□□□ -0.34
HDLBP-236ENST00000477477 ZNF302Q9NR11 478 aa12.92□□□□□ -0.34
HDLBP-236ENST00000477477 CLDND1Q9NY35 253 aa12.92□□□□□ -0.34
HDLBP-236ENST00000477477 MRPL42Q9Y6G3 142 aaKnown RBP12.92□□□□□ -0.34
HDLBP-236ENST00000477477 COL1A2P08123 1366 aa12.92□□□□□ -0.34
HDLBP-236ENST00000477477 IPO5O00410 1097 aaKnown RBP12.91□□□□□ -0.34
HDLBP-236ENST00000477477 GPR37L1O60883 481 aa12.91□□□□□ -0.34
HDLBP-236ENST00000477477 ATP4AP20648 1035 aa12.91□□□□□ -0.34
HDLBP-236ENST00000477477 SSTR3P32745 418 aaPredicted RBP12.91□□□□□ -0.34
HDLBP-236ENST00000477477 HYAL1Q12794 435 aa12.91□□□□□ -0.34
HDLBP-236ENST00000477477 TMEM266Q2M3C6 531 aa12.91□□□□□ -0.34
HDLBP-236ENST00000477477 CTC1Q2NKJ3 1217 aa12.91□□□□□ -0.34
HDLBP-236ENST00000477477 ZNF484Q5JVG2 852 aa12.91□□□□□ -0.34
HDLBP-236ENST00000477477 SWSAP1Q6NVH7 229 aa12.91□□□□□ -0.34
HDLBP-236ENST00000477477 BLOC1S2Q6QNY1 142 aa12.91□□□□□ -0.34
HDLBP-236ENST00000477477 FAM43BQ6ZT52 329 aaPredicted RBP12.91□□□□□ -0.34
HDLBP-236ENST00000477477 KIAA0319LQ8IZA0 1049 aa12.91□□□□□ -0.34
HDLBP-236ENST00000477477 REXO1Q8N1G1 1221 aaKnown RBP12.91□□□□□ -0.34
HDLBP-236ENST00000477477 FBXL16Q8N461 479 aa12.91□□□□□ -0.34
HDLBP-236ENST00000477477 CCDC12Q8WUD4 166 aaPredicted RBP12.91□□□□□ -0.34
HDLBP-236ENST00000477477 P2RX5Q93086 422 aa12.91□□□□□ -0.34
HDLBP-236ENST00000477477 ZNF577Q9BSK1 485 aa12.91□□□□□ -0.34
HDLBP-236ENST00000477477 C6orf50Q9HD87 102 aa12.91□□□□□ -0.34
HDLBP-236ENST00000477477 ERVK-5Q9HDB9 667 aa12.91□□□□□ -0.34
HDLBP-236ENST00000477477 PLAGL2Q9UPG8 496 aa12.91□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 19.2 ms