RNA–Protein interactions for RNA: ENST00000472441.1

TM4SF1-202, Transcript of transmembrane 4 L six family member 1, humanhuman

TSL 2 BASIC

Gene TM4SF1, Length 3,115 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TM4SF1-202ENST00000472441 TEX35Q5T0J7 233 aa5.36□□□□□ -1.55
TM4SF1-202ENST00000472441 ARHGEF16Q5VV41 709 aa5.36□□□□□ -1.55
TM4SF1-202ENST00000472441 RNF207Q6ZRF8 634 aa5.36□□□□□ -1.55
TM4SF1-202ENST00000472441 SCYL3Q8IZE3 742 aa5.36□□□□□ -1.55
TM4SF1-202ENST00000472441 ZNF280CQ8ND82 737 aa5.36□□□□□ -1.55
TM4SF1-202ENST00000472441 SYTL5Q8TDW5 730 aaPredicted RBP5.36□□□□□ -1.55
TM4SF1-202ENST00000472441 NACC1Q96RE7 527 aa5.36□□□□□ -1.55
TM4SF1-202ENST00000472441 RMDN3Q96TC7 470 aa5.36□□□□□ -1.55
TM4SF1-202ENST00000472441 LSM14BQ9BX40 385 aaKnown RBP5.36□□□□□ -1.55
TM4SF1-202ENST00000472441 TCEAL9Q9UHQ7 104 aa5.36□□□□□ -1.55
TM4SF1-202ENST00000472441 MACROD2A1Z1Q3 448 aa5.36□□□□□ -1.55
TM4SF1-202ENST00000472441 FRMD3A2A2Y4 597 aa5.36□□□□□ -1.55
TM4SF1-202ENST00000472441 VWA5AO00534 786 aa5.36□□□□□ -1.55
TM4SF1-202ENST00000472441 SLC26A4O43511 780 aa5.36□□□□□ -1.55
TM4SF1-202ENST00000472441 CALUO43852 315 aaPredicted RBP5.36□□□□□ -1.55
TM4SF1-202ENST00000472441 AKR1B10O60218 316 aa5.36□□□□□ -1.55
TM4SF1-202ENST00000472441 HOXD13P35453 343 aa5.36□□□□□ -1.55
TM4SF1-202ENST00000472441 EIF4A3P38919 411 aaKnown RBP5.36□□□□□ -1.55
TM4SF1-202ENST00000472441 ARHGAP25P42331 645 aa5.36□□□□□ -1.55
TM4SF1-202ENST00000472441 CASP4P49662 377 aa5.36□□□□□ -1.55
TM4SF1-202ENST00000472441 POLR2FP61218 127 aaKnown RBP5.36□□□□□ -1.55
TM4SF1-202ENST00000472441 HERVK_113P62684 666 aa5.36□□□□□ -1.55
TM4SF1-202ENST00000472441 KRT83P78385 493 aa5.36□□□□□ -1.55
TM4SF1-202ENST00000472441 MRPS9P82933 396 aaKnown RBP5.36□□□□□ -1.55
TM4SF1-202ENST00000472441 SP4Q02446 784 aa5.36□□□□□ -1.55
TM4SF1-202ENST00000472441 KCNH2Q12809 1159 aa5.36□□□□□ -1.55
TM4SF1-202ENST00000472441 MTMR1Q13613 665 aa5.36□□□□□ -1.55
TM4SF1-202ENST00000472441 BAATQ14032 418 aaPredicted RBP5.36□□□□□ -1.55
TM4SF1-202ENST00000472441 SPA17Q15506 151 aa5.36□□□□□ -1.55
TM4SF1-202ENST00000472441 TKFCQ3LXA3 575 aa5.36□□□□□ -1.55
TM4SF1-202ENST00000472441 TDRD12Q587J7 1177 aaKnown RBP5.36□□□□□ -1.55
TM4SF1-202ENST00000472441 ODR4Q5SWX8 454 aa5.36□□□□□ -1.55
TM4SF1-202ENST00000472441 C1orf186Q6ZWK4 172 aa5.36□□□□□ -1.55
TM4SF1-202ENST00000472441 FAM178BQ8IXR5 827 aa5.36□□□□□ -1.55
TM4SF1-202ENST00000472441 RDH13Q8NBN7 331 aa5.36□□□□□ -1.55
TM4SF1-202ENST00000472441 JAKMIP2Q96AA8 810 aa5.36□□□□□ -1.55
TM4SF1-202ENST00000472441 CEP63Q96MT8 703 aa5.36□□□□□ -1.55
TM4SF1-202ENST00000472441 CCDC43Q96MW1 224 aaKnown RBP5.36□□□□□ -1.55
TM4SF1-202ENST00000472441 AS3MTQ9HBK9 375 aa5.36□□□□□ -1.55
TM4SF1-202ENST00000472441 CGNQ9P2M7 1197 aaKnown RBP5.36□□□□□ -1.55
TM4SF1-202ENST00000472441 MRFAP1Q9Y605 127 aa5.36□□□□□ -1.55
TM4SF1-202ENST00000472441 DUSP10Q9Y6W6 482 aa5.36□□□□□ -1.55
TM4SF1-202ENST00000472441 USP34Q70CQ2 3546 aa5.35□□□□□ -1.55
TM4SF1-202ENST00000472441 TMEM150BA6NC51 233 aa5.35□□□□□ -1.55
TM4SF1-202ENST00000472441 RCCD1A6NED2 376 aa5.35□□□□□ -1.55
TM4SF1-202ENST00000472441 ATP9AO75110 1047 aa5.35□□□□□ -1.55
TM4SF1-202ENST00000472441 GNA14O95837 355 aa5.35□□□□□ -1.55
TM4SF1-202ENST00000472441 ACTN1P12814 892 aa5.35□□□□□ -1.55
TM4SF1-202ENST00000472441 CBX1P83916 185 aa5.35□□□□□ -1.55
TM4SF1-202ENST00000472441 MEA1Q16626 185 aa5.35□□□□□ -1.55
TM4SF1-202ENST00000472441 UTP14CQ5TAP6 766 aaKnown RBP5.35□□□□□ -1.55
TM4SF1-202ENST00000472441 SNRNP48Q6IEG0 339 aaKnown RBP5.35□□□□□ -1.55
TM4SF1-202ENST00000472441 FBXO38Q6PIJ6 1188 aa5.35□□□□□ -1.55
TM4SF1-202ENST00000472441 LACRTQ9GZZ8 138 aa5.35□□□□□ -1.55
TM4SF1-202ENST00000472441 PARVGQ9HBI0 331 aa5.35□□□□□ -1.55
TM4SF1-202ENST00000472441 RNF146Q9NTX7 359 aa5.35□□□□□ -1.55
TM4SF1-202ENST00000472441 ARHGAP20Q9P2F6 1191 aa5.35□□□□□ -1.55
TM4SF1-202ENST00000472441 ARMCX3Q9UH62 379 aaPredicted RBP5.35□□□□□ -1.55
TM4SF1-202ENST00000472441 PDE4DIPQ5VU43 2346 aa5.35□□□□□ -1.55
TM4SF1-202ENST00000472441 SBF1O95248 1867 aa5.35□□□□□ -1.55
TM4SF1-202ENST00000472441 ATAD5Q96QE3 1844 aa5.35□□□□□ -1.55
TM4SF1-202ENST00000472441 A0A1W2PQJ5 194 aa5.35□□□□□ -1.55
TM4SF1-202ENST00000472441 KRT86O43790 486 aa5.35□□□□□ -1.55
TM4SF1-202ENST00000472441 AKAP3O75969 853 aa5.35□□□□□ -1.55
TM4SF1-202ENST00000472441 DDNO94850 711 aaPredicted RBP5.35□□□□□ -1.55
TM4SF1-202ENST00000472441 NR3C1P04150 777 aa5.35□□□□□ -1.55
TM4SF1-202ENST00000472441 P4HBP07237 508 aaKnown RBP5.35□□□□□ -1.55
TM4SF1-202ENST00000472441 HOXA7P31268 230 aaPredicted RBP5.35□□□□□ -1.55
TM4SF1-202ENST00000472441 HIRAP54198 1017 aaPredicted RBP5.35□□□□□ -1.55
TM4SF1-202ENST00000472441 ITGB3BPQ13352 177 aaPredicted RBP5.35□□□□□ -1.55
TM4SF1-202ENST00000472441 RAPGEF1Q13905 1077 aa5.35□□□□□ -1.55
TM4SF1-202ENST00000472441 COG2Q14746 738 aa5.35□□□□□ -1.55
TM4SF1-202ENST00000472441 PGM5Q15124 567 aa5.35□□□□□ -1.55
TM4SF1-202ENST00000472441 EDRF1Q3B7T1 1238 aa5.35□□□□□ -1.55
TM4SF1-202ENST00000472441 FIGNQ5HY92 759 aa5.35□□□□□ -1.55
TM4SF1-202ENST00000472441 APOBEC3FQ8IUX4 373 aaKnown RBP5.35□□□□□ -1.55
TM4SF1-202ENST00000472441 TRIM59Q8IWR1 403 aa5.35□□□□□ -1.55
TM4SF1-202ENST00000472441 SYCP3Q8IZU3 236 aa5.35□□□□□ -1.55
TM4SF1-202ENST00000472441 ANKRD13CQ8N6S4 541 aa5.35□□□□□ -1.55
TM4SF1-202ENST00000472441 RIT2Q99578 217 aa5.35□□□□□ -1.55
TM4SF1-202ENST00000472441 NAPGQ99747 312 aaPredicted RBP5.35□□□□□ -1.55
TM4SF1-202ENST00000472441 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP5.35□□□□□ -1.55
TM4SF1-202ENST00000472441 HAUS4Q9H6D7 363 aa5.35□□□□□ -1.55
TM4SF1-202ENST00000472441 AGO4Q9HCK5 861 aaKnown RBP5.35□□□□□ -1.55
TM4SF1-202ENST00000472441 GPRC5DQ9NZD1 345 aa5.35□□□□□ -1.55
TM4SF1-202ENST00000472441 PLAGL2Q9UPG8 496 aa5.35□□□□□ -1.55
TM4SF1-202ENST00000472441 EYSQ5T1H1 3165 aa5.35□□□□□ -1.55
TM4SF1-202ENST00000472441 PDXKO00764 312 aa5.34□□□□□ -1.55
TM4SF1-202ENST00000472441 USO1O60763 962 aaKnown RBP5.34□□□□□ -1.55
TM4SF1-202ENST00000472441 HIP1RO75146 1068 aa5.34□□□□□ -1.55
TM4SF1-202ENST00000472441 EPB41P11171 864 aaKnown RBP5.34□□□□□ -1.55
TM4SF1-202ENST00000472441 XRCC5P13010 732 aaKnown RBP5.34□□□□□ -1.55
TM4SF1-202ENST00000472441 GAP43P17677 238 aa5.34□□□□□ -1.55
TM4SF1-202ENST00000472441 SLC9A1P19634 815 aa5.34□□□□□ -1.55
TM4SF1-202ENST00000472441 RPL13P26373 211 aaKnown RBP5.34□□□□□ -1.55
TM4SF1-202ENST00000472441 CYP2J2P51589 502 aa5.34□□□□□ -1.55
TM4SF1-202ENST00000472441 KIF11P52732 1056 aa5.34□□□□□ -1.55
TM4SF1-202ENST00000472441 NAP1L1P55209 391 aaKnown RBP5.34□□□□□ -1.55
TM4SF1-202ENST00000472441 KIF5AQ12840 1032 aa5.34□□□□□ -1.55
TM4SF1-202ENST00000472441 PCNX4Q63HM2 1172 aa5.34□□□□□ -1.55
Retrieved 100 of 20,778 RNA–protein pairs in 32 ms