RNA–Protein interactions for RNA: ENST00000469093.1

COL5A1-207, Transcript of collagen type V alpha 1 chain, humanhuman

TSL 3

Gene COL5A1, Length 670 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL5A1-207ENST00000469093 SPPL3Q8TCT6 385 aa14□□□□□ -0.17
COL5A1-207ENST00000469093 TNPO1Q92973 898 aaKnown RBP14□□□□□ -0.17
COL5A1-207ENST00000469093 P2RX5Q93086 422 aa14□□□□□ -0.17
COL5A1-207ENST00000469093 SDF4Q9BRK5 362 aa14□□□□□ -0.17
COL5A1-207ENST00000469093 ESYT1Q9BSJ8 1104 aa14□□□□□ -0.17
COL5A1-207ENST00000469093 TRPC6Q9Y210 931 aa14□□□□□ -0.17
COL5A1-207ENST00000469093 TRPV2Q9Y5S1 764 aa14□□□□□ -0.17
COL5A1-207ENST00000469093 NLRC5Q86WI3 1866 aa13.99□□□□□ -0.17
COL5A1-207ENST00000469093 IGSF9BQ9UPX0 1349 aa13.99□□□□□ -0.17
COL5A1-207ENST00000469093 MEIS1O00470 390 aa13.99□□□□□ -0.17
COL5A1-207ENST00000469093 LINC01565O15544 149 aa13.99□□□□□ -0.17
COL5A1-207ENST00000469093 CSPG5O95196 566 aa13.99□□□□□ -0.17
COL5A1-207ENST00000469093 FOSP01100 380 aaPredicted RBP13.99□□□□□ -0.17
COL5A1-207ENST00000469093 ITGB1P05556 798 aa13.99□□□□□ -0.17
COL5A1-207ENST00000469093 FUT2Q10981 343 aa13.99□□□□□ -0.17
COL5A1-207ENST00000469093 ITGB3BPQ13352 177 aaPredicted RBP13.99□□□□□ -0.17
COL5A1-207ENST00000469093 CSPP1Q1MSJ5 1256 aa13.99□□□□□ -0.17
COL5A1-207ENST00000469093 CEP55Q53EZ4 464 aa13.99□□□□□ -0.17
COL5A1-207ENST00000469093 NAALADL2Q58DX5 795 aa13.99□□□□□ -0.17
COL5A1-207ENST00000469093 MTHFD1LQ6UB35 978 aa13.99□□□□□ -0.17
COL5A1-207ENST00000469093 NME8Q8N427 588 aa13.99□□□□□ -0.17
COL5A1-207ENST00000469093 PGBD1Q96JS3 809 aa13.99□□□□□ -0.17
COL5A1-207ENST00000469093 UPF3BQ9BZI7 483 aaKnown RBP13.99□□□□□ -0.17
COL5A1-207ENST00000469093 TMX1Q9H3N1 280 aa13.99□□□□□ -0.17
COL5A1-207ENST00000469093 AGO4Q9HCK5 861 aaKnown RBP13.99□□□□□ -0.17
COL5A1-207ENST00000469093 RIC8AQ9NPQ8 531 aa13.99□□□□□ -0.17
COL5A1-207ENST00000469093 V9GY48 417 aaPredicted RBP13.99□□□□□ -0.17
COL5A1-207ENST00000469093 KDM3AQ9Y4C1 1321 aa13.98□□□□□ -0.17
COL5A1-207ENST00000469093 RALGAPA2Q2PPJ7 1873 aa13.98□□□□□ -0.17
COL5A1-207ENST00000469093 IGKV6D-21A0A0A0MT36 114 aa13.98□□□□□ -0.17
COL5A1-207ENST00000469093 SMIM35A0A1B0GVV1 85 aa13.98□□□□□ -0.17
COL5A1-207ENST00000469093 M0QZ92 97 aa13.98□□□□□ -0.17
COL5A1-207ENST00000469093 TBX10O75333 385 aa13.98□□□□□ -0.17
COL5A1-207ENST00000469093 STAG3L1P0CL83 205 aa13.98□□□□□ -0.17
COL5A1-207ENST00000469093 KLRC1P26715 233 aa13.98□□□□□ -0.17
COL5A1-207ENST00000469093 NAPAP54920 295 aa13.98□□□□□ -0.17
COL5A1-207ENST00000469093 KRT76Q01546 638 aa13.98□□□□□ -0.17
COL5A1-207ENST00000469093 EXOSC10Q01780 885 aaKnown RBP13.98□□□□□ -0.17
COL5A1-207ENST00000469093 APOA5Q6Q788 366 aa13.98□□□□□ -0.17
COL5A1-207ENST00000469093 SYNE3Q6ZMZ3 975 aa13.98□□□□□ -0.17
COL5A1-207ENST00000469093 TEX2Q8IWB9 1127 aa13.98□□□□□ -0.17
COL5A1-207ENST00000469093 KLHL23Q8NBE8 558 aa13.98□□□□□ -0.17
COL5A1-207ENST00000469093 ANO3Q9BYT9 981 aa13.98□□□□□ -0.17
COL5A1-207ENST00000469093 CDHR5Q9HBB8 845 aa13.98□□□□□ -0.17
COL5A1-207ENST00000469093 CD207Q9UJ71 328 aa13.98□□□□□ -0.17
COL5A1-207ENST00000469093 BRPF3Q9ULD4 1205 aa13.98□□□□□ -0.17
COL5A1-207ENST00000469093 SMCO2A6NFE2 343 aa13.97□□□□□ -0.17
COL5A1-207ENST00000469093 CCNE2O96020 404 aa13.97□□□□□ -0.17
COL5A1-207ENST00000469093 SCG2P13521 617 aa13.97□□□□□ -0.17
COL5A1-207ENST00000469093 GATMP50440 423 aa13.97□□□□□ -0.17
COL5A1-207ENST00000469093 SLC26A2P50443 739 aa13.97□□□□□ -0.17
COL5A1-207ENST00000469093 PAK2Q13177 524 aa13.97□□□□□ -0.17
COL5A1-207ENST00000469093 SMAD4Q13485 552 aaKnown RBP13.97□□□□□ -0.17
COL5A1-207ENST00000469093 TMEM266Q2M3C6 531 aa13.97□□□□□ -0.17
COL5A1-207ENST00000469093 PAN2Q504Q3 1202 aaKnown RBP13.97□□□□□ -0.17
COL5A1-207ENST00000469093 ABHD15Q6UXT9 468 aa13.97□□□□□ -0.17
COL5A1-207ENST00000469093 ADGRD2Q7Z7M1 963 aa13.97□□□□□ -0.17
COL5A1-207ENST00000469093 KIAA0319LQ8IZA0 1049 aa13.97□□□□□ -0.17
COL5A1-207ENST00000469093 POF1BQ8WVV4 589 aa13.97□□□□□ -0.17
COL5A1-207ENST00000469093 MSLNLQ96KJ4 702 aa13.97□□□□□ -0.17
COL5A1-207ENST00000469093 NEK1Q96PY6 1258 aa13.97□□□□□ -0.17
COL5A1-207ENST00000469093 ANO2Q9NQ90 1003 aa13.97□□□□□ -0.17
COL5A1-207ENST00000469093 RBM28Q9NW13 759 aaKnown RBP13.97□□□□□ -0.17
COL5A1-207ENST00000469093 TMEM260Q9NX78 707 aa13.97□□□□□ -0.17
COL5A1-207ENST00000469093 CLEC1BQ9P126 229 aa13.97□□□□□ -0.17
COL5A1-207ENST00000469093 CNTNAP5Q8WYK1 1306 aa13.96□□□□□ -0.17
COL5A1-207ENST00000469093 STXBP3O00186 592 aa13.96□□□□□ -0.17
COL5A1-207ENST00000469093 HBP1O60381 514 aa13.96□□□□□ -0.17
COL5A1-207ENST00000469093 EYA4O95677 639 aa13.96□□□□□ -0.17
COL5A1-207ENST00000469093 SREBF1P36956 1147 aa13.96□□□□□ -0.17
COL5A1-207ENST00000469093 ADCY7P51828 1080 aa13.96□□□□□ -0.17
COL5A1-207ENST00000469093 NFX1Q12986 1120 aaKnown RBP13.96□□□□□ -0.17
COL5A1-207ENST00000469093 RTN1Q16799 776 aa13.96□□□□□ -0.17
COL5A1-207ENST00000469093 DHX32Q7L7V1 743 aaKnown RBP13.96□□□□□ -0.17
COL5A1-207ENST00000469093 ALYREFQ86V81 257 aaKnown RBP13.96□□□□□ -0.17
COL5A1-207ENST00000469093 RNF135Q8IUD6 432 aa13.96□□□□□ -0.17
COL5A1-207ENST00000469093 EFHBQ8N7U6 833 aa13.96□□□□□ -0.17
COL5A1-207ENST00000469093 ATP8B4Q8TF62 1192 aa13.96□□□□□ -0.17
COL5A1-207ENST00000469093 TCEANC2Q96MN5 208 aa13.96□□□□□ -0.17
COL5A1-207ENST00000469093 POP1Q99575 1024 aaKnown RBP13.96□□□□□ -0.17
COL5A1-207ENST00000469093 ERVK-5Q9HDB9 667 aa13.96□□□□□ -0.17
COL5A1-207ENST00000469093 FAM217BQ9NTX9 383 aaPredicted RBP13.96□□□□□ -0.17
COL5A1-207ENST00000469093 BARHL2Q9NY43 387 aa13.96□□□□□ -0.17
COL5A1-207ENST00000469093 MUTYHQ9UIF7 546 aa13.96□□□□□ -0.17
COL5A1-207ENST00000469093 LRFN2Q9ULH4 789 aa13.96□□□□□ -0.17
COL5A1-207ENST00000469093 GINS2Q9Y248 185 aa13.96□□□□□ -0.17
COL5A1-207ENST00000469093 NOC2LQ9Y3T9 749 aaKnown RBP13.96□□□□□ -0.17
COL5A1-207ENST00000469093 FAM86B1E9PN63 330 aa13.95□□□□□ -0.18
COL5A1-207ENST00000469093 DDX39AO00148 427 aaKnown RBP13.95□□□□□ -0.18
COL5A1-207ENST00000469093 BACH1O14867 736 aa13.95□□□□□ -0.18
COL5A1-207ENST00000469093 DHX15O43143 795 aaKnown RBP13.95□□□□□ -0.18
COL5A1-207ENST00000469093 ZBTB43O43298 467 aa13.95□□□□□ -0.18
COL5A1-207ENST00000469093 MGEA5O60502 916 aa13.95□□□□□ -0.18
COL5A1-207ENST00000469093 PPFIA3O75145 1194 aa13.95□□□□□ -0.18
COL5A1-207ENST00000469093 FAM86B2P0C5J1 330 aa13.95□□□□□ -0.18
COL5A1-207ENST00000469093 ATP4AP20648 1035 aa13.95□□□□□ -0.18
COL5A1-207ENST00000469093 ZNF76P36508 570 aa13.95□□□□□ -0.18
COL5A1-207ENST00000469093 SARSP49591 514 aaKnown RBP13.95□□□□□ -0.18
COL5A1-207ENST00000469093 CLK2P49760 499 aaKnown RBP13.95□□□□□ -0.18
COL5A1-207ENST00000469093 NDUFV1P49821 464 aa13.95□□□□□ -0.18
Retrieved 100 of 20,778 RNA–protein pairs in 47.7 ms