RNA–Protein interactions for RNA: ENST00000467062.5

SNAPC3-205, Transcript of small nuclear RNA activating complex polypeptide 3, humanhuman

TSL 1 (best)

Gene SNAPC3, Length 2,574 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNAPC3-205ENST00000467062 RTN3O95197 1032 aaPredicted RBP19.72■□□□□ 0.75
SNAPC3-205ENST00000467062 SHMT1P34896 483 aa19.72■□□□□ 0.75
SNAPC3-205ENST00000467062 PAFAH1B1P43034 410 aa19.72■□□□□ 0.75
SNAPC3-205ENST00000467062 USP17L24Q0WX57 530 aa19.72■□□□□ 0.75
SNAPC3-205ENST00000467062 CDC42EP5Q6NZY7 148 aa19.72■□□□□ 0.75
SNAPC3-205ENST00000467062 USP17L6PQ6QN14 398 aa19.72■□□□□ 0.75
SNAPC3-205ENST00000467062 CCDC155Q8N6L0 562 aa19.72■□□□□ 0.75
SNAPC3-205ENST00000467062 SNX29Q8TEQ0 813 aa19.72■□□□□ 0.75
SNAPC3-205ENST00000467062 TBC1D7Q9P0N9 293 aa19.72■□□□□ 0.75
SNAPC3-205ENST00000467062 CAPN11Q9UMQ6 739 aa19.72■□□□□ 0.75
SNAPC3-205ENST00000467062 G3V3G9 751 aa19.71■□□□□ 0.75
SNAPC3-205ENST00000467062 PPIP5K2O43314 1243 aa19.71■□□□□ 0.75
SNAPC3-205ENST00000467062 SRGNP10124 158 aa19.71■□□□□ 0.75
SNAPC3-205ENST00000467062 TAL1P17542 331 aaPredicted RBP19.71■□□□□ 0.75
SNAPC3-205ENST00000467062 TCP1P17987 556 aaKnown RBP19.71■□□□□ 0.75
SNAPC3-205ENST00000467062 HPDP32754 393 aaPredicted RBP19.71■□□□□ 0.75
SNAPC3-205ENST00000467062 CACNB1Q02641 598 aaPredicted RBP19.71■□□□□ 0.75
SNAPC3-205ENST00000467062 KIF5AQ12840 1032 aa19.71■□□□□ 0.75
SNAPC3-205ENST00000467062 MIIPQ5JXC2 388 aa19.71■□□□□ 0.75
SNAPC3-205ENST00000467062 DCAF8Q5TAQ9 597 aa19.71■□□□□ 0.75
SNAPC3-205ENST00000467062 LACRTQ9GZZ8 138 aa19.71■□□□□ 0.75
SNAPC3-205ENST00000467062 NAV1Q8NEY1 1877 aa19.71■□□□□ 0.75
SNAPC3-205ENST00000467062 EPHB6O15197 1021 aa19.71■□□□□ 0.75
SNAPC3-205ENST00000467062 LUC7L3O95232 432 aaKnown RBP19.71■□□□□ 0.75
SNAPC3-205ENST00000467062 TTLL1O95922 423 aa19.71■□□□□ 0.75
SNAPC3-205ENST00000467062 DNM2P50570 870 aa19.71■□□□□ 0.75
SNAPC3-205ENST00000467062 KRT26Q7Z3Y9 468 aa19.71■□□□□ 0.75
SNAPC3-205ENST00000467062 KIAA0825Q8IV33 1275 aa19.71■□□□□ 0.75
SNAPC3-205ENST00000467062 HOMEZQ8IX15 550 aa19.71■□□□□ 0.75
SNAPC3-205ENST00000467062 FAM207AQ9NSI2 230 aaPredicted RBP19.71■□□□□ 0.75
SNAPC3-205ENST00000467062 TACC1O75410 805 aa19.7■□□□□ 0.74
SNAPC3-205ENST00000467062 ZNF543Q08ER8 600 aa19.7■□□□□ 0.74
SNAPC3-205ENST00000467062 QPCTQ16769 361 aa19.7■□□□□ 0.74
SNAPC3-205ENST00000467062 CCDC63Q8NA47 563 aa19.7■□□□□ 0.74
SNAPC3-205ENST00000467062 PIK3R5Q8WYR1 880 aa19.7■□□□□ 0.74
SNAPC3-205ENST00000467062 LARP4BQ92615 738 aaKnown RBP19.7■□□□□ 0.74
SNAPC3-205ENST00000467062 CRAMP1Q96RY5 1269 aa19.7■□□□□ 0.74
SNAPC3-205ENST00000467062 KANSL2Q9H9L4 492 aa19.7■□□□□ 0.74
SNAPC3-205ENST00000467062 TMBIM4Q9HC24 238 aa19.7■□□□□ 0.74
SNAPC3-205ENST00000467062 MARCH6O60337 910 aa19.7■□□□□ 0.74
SNAPC3-205ENST00000467062 MYL1P05976 194 aa19.7■□□□□ 0.74
SNAPC3-205ENST00000467062 GSTA1P08263 222 aa19.7■□□□□ 0.74
SNAPC3-205ENST00000467062 FERP16591 822 aa19.7■□□□□ 0.74
SNAPC3-205ENST00000467062 NOVP48745 357 aa19.7■□□□□ 0.74
SNAPC3-205ENST00000467062 BLMHQ13867 455 aa19.7■□□□□ 0.74
SNAPC3-205ENST00000467062 CWF19L1Q69YN2 538 aaKnown RBP19.7■□□□□ 0.74
SNAPC3-205ENST00000467062 MAATS1Q7Z4T9 603 aa19.7■□□□□ 0.74
SNAPC3-205ENST00000467062 SP8Q8IXZ3 490 aa19.7■□□□□ 0.74
SNAPC3-205ENST00000467062 CCDC170Q8IYT3 715 aa19.7■□□□□ 0.74
SNAPC3-205ENST00000467062 MACROD2A1Z1Q3 448 aa19.69■□□□□ 0.74
SNAPC3-205ENST00000467062 RBM5P52756 815 aaKnown RBP eCLIP19.69■□□□□ 0.74
SNAPC3-205ENST00000467062 AMPD3Q01432 767 aa19.69■□□□□ 0.74
SNAPC3-205ENST00000467062 APOBEC3HQ6NTF7 200 aaKnown RBP19.69■□□□□ 0.74
SNAPC3-205ENST00000467062 KLHL23Q8NBE8 558 aa19.69■□□□□ 0.74
SNAPC3-205ENST00000467062 WHAMMQ8TF30 809 aa19.69■□□□□ 0.74
SNAPC3-205ENST00000467062 NOC3LQ8WTT2 800 aaKnown RBP19.69■□□□□ 0.74
SNAPC3-205ENST00000467062 DDX12PQ92771 950 aa19.69■□□□□ 0.74
SNAPC3-205ENST00000467062 CUEDC2Q9H467 287 aa19.69■□□□□ 0.74
SNAPC3-205ENST00000467062 GDF3Q9NR23 364 aa19.69■□□□□ 0.74
SNAPC3-205ENST00000467062 ZNHIT6Q9NWK9 470 aaKnown RBP19.69■□□□□ 0.74
SNAPC3-205ENST00000467062 ATP6V0A2Q9Y487 856 aa19.69■□□□□ 0.74
SNAPC3-205ENST00000467062 TAF1LQ8IZX4 1826 aa19.69■□□□□ 0.74
SNAPC3-205ENST00000467062 A0A1W2PQC6 194 aa19.69■□□□□ 0.74
SNAPC3-205ENST00000467062 CFAP73A6NFT4 308 aa19.69■□□□□ 0.74
SNAPC3-205ENST00000467062 PAPOLAP51003 745 aaKnown RBP19.69■□□□□ 0.74
SNAPC3-205ENST00000467062 MRPS25P82663 173 aaKnown RBP19.69■□□□□ 0.74
SNAPC3-205ENST00000467062 TBC1D25Q3MII6 688 aa19.69■□□□□ 0.74
SNAPC3-205ENST00000467062 ASPRV1Q53RT3 343 aa19.69■□□□□ 0.74
SNAPC3-205ENST00000467062 HAS1Q92839 578 aa19.69■□□□□ 0.74
SNAPC3-205ENST00000467062 L3MBTL3Q96JM7 780 aaPredicted RBP19.69■□□□□ 0.74
SNAPC3-205ENST00000467062 ZNF570Q96NI8 536 aa19.69■□□□□ 0.74
SNAPC3-205ENST00000467062 COA1Q9GZY4 146 aa19.69■□□□□ 0.74
SNAPC3-205ENST00000467062 NHEJ1Q9H9Q4 299 aaPredicted RBP19.69■□□□□ 0.74
SNAPC3-205ENST00000467062 NFU1Q9UMS0 254 aa19.69■□□□□ 0.74
SNAPC3-205ENST00000467062 HYOU1Q9Y4L1 999 aa19.69■□□□□ 0.74
SNAPC3-205ENST00000467062 NHSQ6T4R5 1651 aa19.69■□□□□ 0.74
SNAPC3-205ENST00000467062 NT5C2P49902 561 aa19.68■□□□□ 0.74
SNAPC3-205ENST00000467062 BYSLQ13895 437 aaKnown RBP19.68■□□□□ 0.74
SNAPC3-205ENST00000467062 CDC37Q16543 378 aaPredicted RBP19.68■□□□□ 0.74
SNAPC3-205ENST00000467062 LRIG3Q6UXM1 1119 aa19.68■□□□□ 0.74
SNAPC3-205ENST00000467062 CPLX4Q7Z7G2 160 aa19.68■□□□□ 0.74
SNAPC3-205ENST00000467062 TTYH3Q9C0H2 523 aa19.68■□□□□ 0.74
SNAPC3-205ENST00000467062 QTRT2Q9H974 415 aaKnown RBP19.68■□□□□ 0.74
SNAPC3-205ENST00000467062 IGKV6D-41A0A0C4DH26 115 aa19.68■□□□□ 0.74
SNAPC3-205ENST00000467062 PNMA6FA0A0J9YX94 578 aa19.68■□□□□ 0.74
SNAPC3-205ENST00000467062 BICDL2A1A5D9 508 aa19.68■□□□□ 0.74
SNAPC3-205ENST00000467062 GCOM1H8Y6P7 765 aaPredicted RBP19.68■□□□□ 0.74
SNAPC3-205ENST00000467062 MYZAPP0CAP1 466 aa19.68■□□□□ 0.74
SNAPC3-205ENST00000467062 SNHG28P0DPA3 235 aa19.68■□□□□ 0.74
SNAPC3-205ENST00000467062 CNNM4Q6P4Q7 775 aa19.68■□□□□ 0.74
SNAPC3-205ENST00000467062 SMCR8Q8TEV9 937 aaPredicted RBP19.68■□□□□ 0.74
SNAPC3-205ENST00000467062 FGFBP2Q9BYJ0 223 aa19.68■□□□□ 0.74
SNAPC3-205ENST00000467062 DNAJC18Q9H819 358 aa19.68■□□□□ 0.74
SNAPC3-205ENST00000467062 DDX25Q9UHL0 483 aaKnown RBP19.68■□□□□ 0.74
SNAPC3-205ENST00000467062 SLC12A6Q9UHW9 1150 aa19.68■□□□□ 0.74
SNAPC3-205ENST00000467062 PCDHGC5Q9Y5F6 944 aa19.68■□□□□ 0.74
SNAPC3-205ENST00000467062 NPHP3-ACAD11A0A0J9YXS1 232 aa19.67■□□□□ 0.74
SNAPC3-205ENST00000467062 CLTAP09496 248 aa19.67■□□□□ 0.74
SNAPC3-205ENST00000467062 ROR2Q01974 943 aaKnown RBP19.67■□□□□ 0.74
SNAPC3-205ENST00000467062 MEA1Q16626 185 aa19.67■□□□□ 0.74
Retrieved 100 of 20,778 RNA–protein pairs in 17.4 ms