RNA–Protein interactions for RNA: ENST00000466532.1

COL9A3-206, Transcript of collagen type IX alpha 3 chain, humanhuman

TSL 2

Gene COL9A3, Length 539 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL9A3-206ENST00000466532 FNDC1Q4ZHG4 1894 aaPredicted RBP21.8■■□□□ 1.08
COL9A3-206ENST00000466532 NID2Q14112 1375 aa21.8■■□□□ 1.08
COL9A3-206ENST00000466532 FAM86B1E9PN63 330 aa21.8■■□□□ 1.08
COL9A3-206ENST00000466532 CCNE2O96020 404 aa21.8■■□□□ 1.08
COL9A3-206ENST00000466532 FAM86B2P0C5J1 330 aa21.8■■□□□ 1.08
COL9A3-206ENST00000466532 KCNA5P22460 613 aa21.8■■□□□ 1.08
COL9A3-206ENST00000466532 SLC26A2P50443 739 aa21.8■■□□□ 1.08
COL9A3-206ENST00000466532 BANK1Q8NDB2 785 aa21.8■■□□□ 1.08
COL9A3-206ENST00000466532 RC3H2Q9HBD1 1191 aaKnown RBP21.8■■□□□ 1.08
COL9A3-206ENST00000466532 SQORQ9Y6N5 450 aa21.8■■□□□ 1.08
COL9A3-206ENST00000466532 IGKV6D-21A0A0A0MT36 114 aa21.79■■□□□ 1.08
COL9A3-206ENST00000466532 ESYT2A0FGR8 921 aa21.79■■□□□ 1.08
COL9A3-206ENST00000466532 BACH1O14867 736 aa21.79■■□□□ 1.08
COL9A3-206ENST00000466532 FAM160B1Q5W0V3 765 aa21.79■■□□□ 1.08
COL9A3-206ENST00000466532 MTHFD1LQ6UB35 978 aa21.79■■□□□ 1.08
COL9A3-206ENST00000466532 ABHD15Q6UXT9 468 aa21.79■■□□□ 1.08
COL9A3-206ENST00000466532 CCDC12Q8WUD4 166 aaPredicted RBP21.79■■□□□ 1.08
COL9A3-206ENST00000466532 CRYGNQ8WXF5 182 aa21.79■■□□□ 1.08
COL9A3-206ENST00000466532 LINC01599Q8WXQ3 324 aa21.79■■□□□ 1.08
COL9A3-206ENST00000466532 ZMYND12Q9H0C1 365 aa21.79■■□□□ 1.08
COL9A3-206ENST00000466532 C6orf50Q9HD87 102 aa21.79■■□□□ 1.08
COL9A3-206ENST00000466532 RWDD3Q9Y3V2 267 aa21.79■■□□□ 1.08
COL9A3-206ENST00000466532 IGLV3-22A0A075B6J6 115 aa21.78■■□□□ 1.08
COL9A3-206ENST00000466532 SMIM35A0A1B0GVV1 85 aa21.78■■□□□ 1.08
COL9A3-206ENST00000466532 ADAMTS3O15072 1205 aa21.78■■□□□ 1.08
COL9A3-206ENST00000466532 PRPF3O43395 683 aaKnown RBP21.78■■□□□ 1.08
COL9A3-206ENST00000466532 CYP3A4P08684 503 aa21.78■■□□□ 1.08
COL9A3-206ENST00000466532 BTG3Q14201 252 aaPredicted RBP21.78■■□□□ 1.08
COL9A3-206ENST00000466532 PKN1Q16512 942 aa21.78■■□□□ 1.08
COL9A3-206ENST00000466532 LEXMQ3ZCV2 418 aa21.78■■□□□ 1.08
COL9A3-206ENST00000466532 CCDC60Q8IWA6 550 aaPredicted RBP21.78■■□□□ 1.08
COL9A3-206ENST00000466532 REXO1Q8N1G1 1221 aaKnown RBP21.78■■□□□ 1.08
COL9A3-206ENST00000466532 UIMC1Q96RL1 719 aa21.78■■□□□ 1.08
COL9A3-206ENST00000466532 FTHL17Q9BXU8 183 aa21.78■■□□□ 1.08
COL9A3-206ENST00000466532 CELF4Q9BZC1 486 aaKnown RBP21.78■■□□□ 1.08
COL9A3-206ENST00000466532 IGSF9BQ9UPX0 1349 aa21.78■■□□□ 1.08
COL9A3-206ENST00000466532 PLXNA4Q9HCM2 1894 aa21.77■■□□□ 1.08
COL9A3-206ENST00000466532 C5orf67F2Z3F1 127 aa21.77■■□□□ 1.08
COL9A3-206ENST00000466532 IPO5O00410 1097 aaKnown RBP21.77■■□□□ 1.08
COL9A3-206ENST00000466532 HBP1O60381 514 aa21.77■■□□□ 1.08
COL9A3-206ENST00000466532 RB1P06400 928 aa21.77■■□□□ 1.08
COL9A3-206ENST00000466532 LINC00271P0C7V0 271 aa21.77■■□□□ 1.08
COL9A3-206ENST00000466532 RPS6KB1P23443 525 aa21.77■■□□□ 1.08
COL9A3-206ENST00000466532 KLRC1P26715 233 aa21.77■■□□□ 1.08
COL9A3-206ENST00000466532 BMPR1AP36894 532 aa21.77■■□□□ 1.08
COL9A3-206ENST00000466532 KRT76Q01546 638 aa21.77■■□□□ 1.08
COL9A3-206ENST00000466532 PAK2Q13177 524 aa21.77■■□□□ 1.08
COL9A3-206ENST00000466532 TCEAL5Q5H9L2 206 aa21.77■■□□□ 1.08
COL9A3-206ENST00000466532 MCTP2Q6DN12 878 aa21.77■■□□□ 1.08
COL9A3-206ENST00000466532 NME8Q8N427 588 aa21.77■■□□□ 1.08
COL9A3-206ENST00000466532 GADD45GIP1Q8TAE8 222 aaPredicted RBP21.77■■□□□ 1.08
COL9A3-206ENST00000466532 ATP8B4Q8TF62 1192 aa21.77■■□□□ 1.08
COL9A3-206ENST00000466532 PHKBQ93100 1093 aa21.77■■□□□ 1.08
COL9A3-206ENST00000466532 ZNF689Q96CS4 500 aaPredicted RBP21.77■■□□□ 1.08
COL9A3-206ENST00000466532 CCDC136Q96JN2 1154 aa21.77■■□□□ 1.08
COL9A3-206ENST00000466532 ZNF577Q9BSK1 485 aa21.77■■□□□ 1.08
COL9A3-206ENST00000466532 C1QTNF1Q9BXJ1 281 aa21.77■■□□□ 1.08
COL9A3-206ENST00000466532 NSUN3Q9H649 340 aaKnown RBP21.77■■□□□ 1.08
COL9A3-206ENST00000466532 ZNF302Q9NR11 478 aa21.77■■□□□ 1.08
COL9A3-206ENST00000466532 PADI3Q9ULW8 664 aa21.77■■□□□ 1.08
COL9A3-206ENST00000466532 KDM3AQ9Y4C1 1321 aa21.77■■□□□ 1.07
COL9A3-206ENST00000466532 COL1A2P08123 1366 aa21.76■■□□□ 1.07
COL9A3-206ENST00000466532 DHX15O43143 795 aaKnown RBP21.76■■□□□ 1.07
COL9A3-206ENST00000466532 DGKIO75912 1065 aa21.76■■□□□ 1.07
COL9A3-206ENST00000466532 GNA11P29992 359 aa21.76■■□□□ 1.07
COL9A3-206ENST00000466532 SETQ01105 290 aaPredicted RBP21.76■■□□□ 1.07
COL9A3-206ENST00000466532 AKAP17AQ02040 695 aaKnown RBP21.76■■□□□ 1.07
COL9A3-206ENST00000466532 MIS18BP1Q6P0N0 1132 aa21.76■■□□□ 1.07
COL9A3-206ENST00000466532 PDXDC2PQ6P474 469 aa21.76■■□□□ 1.07
COL9A3-206ENST00000466532 RTN4RL1Q86UN2 441 aaPredicted RBP21.76■■□□□ 1.07
COL9A3-206ENST00000466532 FBXL16Q8N461 479 aa21.76■■□□□ 1.07
COL9A3-206ENST00000466532 CLP1Q92989 425 aaKnown RBP21.76■■□□□ 1.07
COL9A3-206ENST00000466532 C11orf84Q9BUA3 381 aaPredicted RBP21.76■■□□□ 1.07
COL9A3-206ENST00000466532 ZNF484Q5JVG2 852 aa21.75■■□□□ 1.07
COL9A3-206ENST00000466532 SWSAP1Q6NVH7 229 aa21.75■■□□□ 1.07
COL9A3-206ENST00000466532 NPAS4Q8IUM7 802 aa21.75■■□□□ 1.07
COL9A3-206ENST00000466532 AGXT2Q9BYV1 514 aa21.75■■□□□ 1.07
COL9A3-206ENST00000466532 LMAN2LQ9H0V9 348 aa21.75■■□□□ 1.07
COL9A3-206ENST00000466532 TBC1D22BQ9NU19 505 aa21.75■■□□□ 1.07
COL9A3-206ENST00000466532 GRM6O15303 877 aa21.74■■□□□ 1.07
COL9A3-206ENST00000466532 PPFIA3O75145 1194 aa21.74■■□□□ 1.07
COL9A3-206ENST00000466532 REC8O95072 547 aa21.74■■□□□ 1.07
COL9A3-206ENST00000466532 PSMA5P28066 241 aa21.74■■□□□ 1.07
COL9A3-206ENST00000466532 TMEM266Q2M3C6 531 aa21.74■■□□□ 1.07
COL9A3-206ENST00000466532 PTCRAQ6ISU1 281 aaPredicted RBP21.74■■□□□ 1.07
COL9A3-206ENST00000466532 EP400NLQ6ZTU2 488 aa21.74■■□□□ 1.07
COL9A3-206ENST00000466532 CKAP2LQ8IYA6 745 aa21.74■■□□□ 1.07
COL9A3-206ENST00000466532 RASGRP4Q8TDF6 673 aa21.74■■□□□ 1.07
COL9A3-206ENST00000466532 PABPC5Q96DU9 382 aaKnown RBP21.74■■□□□ 1.07
COL9A3-206ENST00000466532 SLC26A6Q9BXS9 759 aa21.74■■□□□ 1.07
COL9A3-206ENST00000466532 RNF26Q9BY78 433 aaPredicted RBP21.74■■□□□ 1.07
COL9A3-206ENST00000466532 EPHX3Q9H6B9 360 aa21.74■■□□□ 1.07
COL9A3-206ENST00000466532 TCEAL9Q9UHQ7 104 aa21.74■■□□□ 1.07
COL9A3-206ENST00000466532 RAPGEFL1Q9UHV5 662 aa21.74■■□□□ 1.07
COL9A3-206ENST00000466532 GINS2Q9Y248 185 aa21.74■■□□□ 1.07
COL9A3-206ENST00000466532 H3BQ06 376 aaPredicted RBP21.73■■□□□ 1.07
COL9A3-206ENST00000466532 STAG3L1P0CL83 205 aa21.73■■□□□ 1.07
COL9A3-206ENST00000466532 IL9P15248 144 aa21.73■■□□□ 1.07
COL9A3-206ENST00000466532 ATP4AP20648 1035 aa21.73■■□□□ 1.07
COL9A3-206ENST00000466532 NFX1Q12986 1120 aaKnown RBP21.73■■□□□ 1.07
Retrieved 100 of 20,778 RNA–protein pairs in 22.5 ms