RNA–Protein interactions for RNA: ENST00000461874.1

VARS-220, Transcript of valyl-tRNA synthetase, humanhuman

TSL 5

Gene VARS, Length 845 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VARS-220ENST00000461874 PRR16Q569H4 304 aa21.51■■□□□ 1.03
VARS-220ENST00000461874 FBXO47Q5MNV8 452 aa21.51■■□□□ 1.03
VARS-220ENST00000461874 MIS18BP1Q6P0N0 1132 aa21.51■■□□□ 1.03
VARS-220ENST00000461874 CCDC60Q8IWA6 550 aaPredicted RBP21.51■■□□□ 1.03
VARS-220ENST00000461874 TSPYL2Q9H2G4 693 aaPredicted RBP21.51■■□□□ 1.03
VARS-220ENST00000461874 SUGCTQ9HAC7 445 aa21.51■■□□□ 1.03
VARS-220ENST00000461874 ZNF302Q9NR11 478 aa21.51■■□□□ 1.03
VARS-220ENST00000461874 MTUS1Q9ULD2 1270 aa21.51■■□□□ 1.03
VARS-220ENST00000461874 EDIL3O43854 480 aa21.5■■□□□ 1.03
VARS-220ENST00000461874 HBP1O60381 514 aa21.5■■□□□ 1.03
VARS-220ENST00000461874 UPP2O95045 317 aa21.5■■□□□ 1.03
VARS-220ENST00000461874 NLRP5P59047 1200 aa21.5■■□□□ 1.03
VARS-220ENST00000461874 MRPS5P82675 430 aaKnown RBP21.5■■□□□ 1.03
VARS-220ENST00000461874 IER5Q5VY09 327 aa21.5■■□□□ 1.03
VARS-220ENST00000461874 ZNF746Q6NUN9 644 aaPredicted RBP21.5■■□□□ 1.03
VARS-220ENST00000461874 SWSAP1Q6NVH7 229 aa21.5■■□□□ 1.03
VARS-220ENST00000461874 ATP8B4Q8TF62 1192 aa21.5■■□□□ 1.03
VARS-220ENST00000461874 LENG9Q96B70 501 aa21.5■■□□□ 1.03
VARS-220ENST00000461874 ASB2Q96Q27 587 aa21.5■■□□□ 1.03
VARS-220ENST00000461874 DEXIO95424 95 aa21.49■■□□□ 1.03
VARS-220ENST00000461874 USP11P51784 963 aa21.49■■□□□ 1.03
VARS-220ENST00000461874 STK3Q13188 491 aa21.49■■□□□ 1.03
VARS-220ENST00000461874 PDXDC2PQ6P474 469 aa21.49■■□□□ 1.03
VARS-220ENST00000461874 MTHFD1LQ6UB35 978 aa21.49■■□□□ 1.03
VARS-220ENST00000461874 TSHZ1Q6ZSZ6 1077 aa21.49■■□□□ 1.03
VARS-220ENST00000461874 GDPD5Q8WTR4 605 aa21.49■■□□□ 1.03
VARS-220ENST00000461874 YME1L1Q96TA2 773 aa21.49■■□□□ 1.03
VARS-220ENST00000461874 LMCD1Q9NZU5 365 aa21.49■■□□□ 1.03
VARS-220ENST00000461874 SQORQ9Y6N5 450 aa21.49■■□□□ 1.03
VARS-220ENST00000461874 SMIM35A0A1B0GVV1 85 aa21.48■■□□□ 1.03
VARS-220ENST00000461874 ENPP3O14638 875 aa21.48■■□□□ 1.03
VARS-220ENST00000461874 ATP4AP20648 1035 aa21.48■■□□□ 1.03
VARS-220ENST00000461874 KLRC1P26715 233 aa21.48■■□□□ 1.03
VARS-220ENST00000461874 KRT76Q01546 638 aa21.48■■□□□ 1.03
VARS-220ENST00000461874 SKIV2LQ15477 1246 aaKnown RBP21.48■■□□□ 1.03
VARS-220ENST00000461874 CPLX2Q6PUV4 134 aaKnown RBP21.48■■□□□ 1.03
VARS-220ENST00000461874 SMAP1Q8IYB5 467 aaPredicted RBP21.48■■□□□ 1.03
VARS-220ENST00000461874 NME8Q8N427 588 aa21.48■■□□□ 1.03
VARS-220ENST00000461874 C17orf80Q9BSJ5 609 aa21.48■■□□□ 1.03
VARS-220ENST00000461874 AGO3Q9H9G7 860 aaKnown RBP21.48■■□□□ 1.03
VARS-220ENST00000461874 PCDHA4Q9UN74 947 aa21.48■■□□□ 1.03
VARS-220ENST00000461874 MAFBQ9Y5Q3 323 aaPredicted RBP21.48■■□□□ 1.03
VARS-220ENST00000461874 TRPV2Q9Y5S1 764 aa21.48■■□□□ 1.03
VARS-220ENST00000461874 M0QZ92 97 aa21.47■■□□□ 1.03
VARS-220ENST00000461874 TMEM62Q0P6H9 643 aa21.47■■□□□ 1.03
VARS-220ENST00000461874 ZNF484Q5JVG2 852 aa21.47■■□□□ 1.03
VARS-220ENST00000461874 FAM177A1Q8N128 213 aaPredicted RBP21.47■■□□□ 1.03
VARS-220ENST00000461874 CELF4Q9BZC1 486 aaKnown RBP21.47■■□□□ 1.03
VARS-220ENST00000461874 PCDHA10Q9Y5I2 948 aa21.47■■□□□ 1.03
VARS-220ENST00000461874 COL1A2P08123 1366 aa21.47■■□□□ 1.03
VARS-220ENST00000461874 REV3LO60673 3130 aa21.46■■□□□ 1.03
VARS-220ENST00000461874 ZBTB42B2RXF5 422 aa21.46■■□□□ 1.03
VARS-220ENST00000461874 MSH4O15457 936 aa21.46■■□□□ 1.03
VARS-220ENST00000461874 PSAPP07602 524 aa21.46■■□□□ 1.03
VARS-220ENST00000461874 CD52P31358 61 aa21.46■■□□□ 1.03
VARS-220ENST00000461874 ANAPC15P60006 121 aa21.46■■□□□ 1.03
VARS-220ENST00000461874 FBXO22Q8NEZ5 403 aa21.46■■□□□ 1.03
VARS-220ENST00000461874 TBCKQ8TEA7 893 aa21.46■■□□□ 1.03
VARS-220ENST00000461874 AIFM3Q96NN9 605 aa21.46■■□□□ 1.03
VARS-220ENST00000461874 C22orf23Q9BZE7 217 aa21.46■■□□□ 1.03
VARS-220ENST00000461874 TCEAL9Q9UHQ7 104 aa21.46■■□□□ 1.03
VARS-220ENST00000461874 KDM3AQ9Y4C1 1321 aa21.46■■□□□ 1.03
VARS-220ENST00000461874 M0R2N6 131 aa21.45■■□□□ 1.02
VARS-220ENST00000461874 SCRN1Q12765 414 aa21.45■■□□□ 1.02
VARS-220ENST00000461874 NPY5RQ15761 445 aa21.45■■□□□ 1.02
VARS-220ENST00000461874 GALNT17Q6IS24 598 aa21.45■■□□□ 1.02
VARS-220ENST00000461874 CKAP2LQ8IYA6 745 aa21.45■■□□□ 1.02
VARS-220ENST00000461874 KIAA0319LQ8IZA0 1049 aa21.45■■□□□ 1.02
VARS-220ENST00000461874 BLIDQ8IZY5 108 aa21.45■■□□□ 1.02
VARS-220ENST00000461874 DAGLBQ8NCG7 672 aa21.45■■□□□ 1.02
VARS-220ENST00000461874 BBXQ8WY36 941 aaPredicted RBP21.45■■□□□ 1.02
VARS-220ENST00000461874 IL17RAQ96F46 866 aa21.45■■□□□ 1.02
VARS-220ENST00000461874 SAMD11Q96NU1 681 aa21.45■■□□□ 1.02
VARS-220ENST00000461874 RIT2Q99578 217 aa21.45■■□□□ 1.02
VARS-220ENST00000461874 IGSF9BQ9UPX0 1349 aa21.45■■□□□ 1.02
VARS-220ENST00000461874 WDR64B1ANS9 1081 aa21.44■■□□□ 1.02
VARS-220ENST00000461874 TFF2Q03403 129 aa21.44■■□□□ 1.02
VARS-220ENST00000461874 EPC2Q52LR7 807 aa21.44■■□□□ 1.02
VARS-220ENST00000461874 SLC5A5Q92911 643 aa21.44■■□□□ 1.02
VARS-220ENST00000461874 FTHL17Q9BXU8 183 aa21.44■■□□□ 1.02
VARS-220ENST00000461874 SLKQ9H2G2 1235 aaPredicted RBP21.44■■□□□ 1.02
VARS-220ENST00000461874 GABBR1Q9UBS5 961 aa21.44■■□□□ 1.02
VARS-220ENST00000461874 TPCN1Q9ULQ1 816 aa21.44■■□□□ 1.02
VARS-220ENST00000461874 PADI3Q9ULW8 664 aa21.44■■□□□ 1.02
VARS-220ENST00000461874 XIRP2A4UGR9 3374 aa21.44■■□□□ 1.02
VARS-220ENST00000461874 CYP3A7-CYP3A51PA0A087WV96 503 aa21.43■■□□□ 1.02
VARS-220ENST00000461874 PFKFB2O60825 505 aa21.43■■□□□ 1.02
VARS-220ENST00000461874 CDKL5O76039 1030 aa21.43■■□□□ 1.02
VARS-220ENST00000461874 CYP3A7P24462 503 aa21.43■■□□□ 1.02
VARS-220ENST00000461874 Q4G0T1 1027 aa21.43■■□□□ 1.02
VARS-220ENST00000461874 RTN4RL1Q86UN2 441 aaPredicted RBP21.43■■□□□ 1.02
VARS-220ENST00000461874 TMEM192Q8IY95 271 aa21.43■■□□□ 1.02
VARS-220ENST00000461874 LINC01599Q8WXQ3 324 aa21.43■■□□□ 1.02
VARS-220ENST00000461874 DISC1Q9NRI5 854 aa21.43■■□□□ 1.02
VARS-220ENST00000461874 COG5Q9UP83 839 aa21.43■■□□□ 1.02
VARS-220ENST00000461874 SAMM50Q9Y512 469 aa21.43■■□□□ 1.02
VARS-220ENST00000461874 SIP14410 1827 aa21.43■■□□□ 1.02
VARS-220ENST00000461874 NCOR1O75376 2440 aa21.43■■□□□ 1.02
VARS-220ENST00000461874 GAS7O60861 476 aa21.42■■□□□ 1.02
VARS-220ENST00000461874 C22orf31O95567 290 aa21.42■■□□□ 1.02
Retrieved 100 of 20,778 RNA–protein pairs in 18 ms