RNA–Protein interactions for RNA: ENST00000454350.5

UBE2D4-208, Transcript of ubiquitin conjugating enzyme E2 D4 (putative), humanhuman

TSL 2

Gene UBE2D4, Length 789 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2D4-208ENST00000454350 ATP4AP20648 1035 aa21.07■□□□□ 0.96
UBE2D4-208ENST00000454350 TOB2Q14106 344 aaPredicted RBP21.07■□□□□ 0.96
UBE2D4-208ENST00000454350 AAK1Q2M2I8 961 aa21.07■□□□□ 0.96
UBE2D4-208ENST00000454350 TSHZ1Q6ZSZ6 1077 aa21.07■□□□□ 0.96
UBE2D4-208ENST00000454350 RTN4RL1Q86UN2 441 aaPredicted RBP21.07■□□□□ 0.96
UBE2D4-208ENST00000454350 CCDC60Q8IWA6 550 aaPredicted RBP21.07■□□□□ 0.96
UBE2D4-208ENST00000454350 HLA-CQ95604 372 aa21.07■□□□□ 0.96
UBE2D4-208ENST00000454350 UIMC1Q96RL1 719 aa21.07■□□□□ 0.96
UBE2D4-208ENST00000454350 FAM49AQ9H0Q0 323 aaPredicted RBP21.07■□□□□ 0.96
UBE2D4-208ENST00000454350 ZSWIM6Q9HCJ5 1215 aa21.07■□□□□ 0.96
UBE2D4-208ENST00000454350 POTEB3A0JP26 581 aa21.06■□□□□ 0.96
UBE2D4-208ENST00000454350 ZBTB42B2RXF5 422 aa21.06■□□□□ 0.96
UBE2D4-208ENST00000454350 DDX39AO00148 427 aaKnown RBP21.06■□□□□ 0.96
UBE2D4-208ENST00000454350 IPO5O00410 1097 aaKnown RBP21.06■□□□□ 0.96
UBE2D4-208ENST00000454350 EPB41L2O43491 1005 aaKnown RBP21.06■□□□□ 0.96
UBE2D4-208ENST00000454350 IFNAR1P17181 557 aa21.06■□□□□ 0.96
UBE2D4-208ENST00000454350 ZNF76P36508 570 aa21.06■□□□□ 0.96
UBE2D4-208ENST00000454350 SLC26A2P50443 739 aa21.06■□□□□ 0.96
UBE2D4-208ENST00000454350 POTEBQ6S5H4 581 aa21.06■□□□□ 0.96
UBE2D4-208ENST00000454350 MTHFD1LQ6UB35 978 aa21.06■□□□□ 0.96
UBE2D4-208ENST00000454350 REXO1Q8N1G1 1221 aaKnown RBP21.06■□□□□ 0.96
UBE2D4-208ENST00000454350 RASGRP4Q8TDF6 673 aa21.06■□□□□ 0.96
UBE2D4-208ENST00000454350 LENG9Q96B70 501 aa21.06■□□□□ 0.96
UBE2D4-208ENST00000454350 SAMD11Q96NU1 681 aa21.06■□□□□ 0.96
UBE2D4-208ENST00000454350 RNF26Q9BY78 433 aaPredicted RBP21.06■□□□□ 0.96
UBE2D4-208ENST00000454350 NCOA5Q9HCD5 579 aaKnown RBP21.06■□□□□ 0.96
UBE2D4-208ENST00000454350 C6orf50Q9HD87 102 aa21.06■□□□□ 0.96
UBE2D4-208ENST00000454350 SQORQ9Y6N5 450 aa21.06■□□□□ 0.96
UBE2D4-208ENST00000454350 FNDC1Q4ZHG4 1894 aaPredicted RBP21.06■□□□□ 0.96
UBE2D4-208ENST00000454350 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP21.05■□□□□ 0.96
UBE2D4-208ENST00000454350 SMIM35A0A1B0GVV1 85 aa21.05■□□□□ 0.96
UBE2D4-208ENST00000454350 H3BNC9 293 aa21.05■□□□□ 0.96
UBE2D4-208ENST00000454350 RPLP2P05387 115 aaKnown RBP21.05■□□□□ 0.96
UBE2D4-208ENST00000454350 PSMA5P28066 241 aa21.05■□□□□ 0.96
UBE2D4-208ENST00000454350 CD52P31358 61 aa21.05■□□□□ 0.96
UBE2D4-208ENST00000454350 CIITAP33076 1130 aa21.05■□□□□ 0.96
UBE2D4-208ENST00000454350 TMEM62Q0P6H9 643 aa21.05■□□□□ 0.96
UBE2D4-208ENST00000454350 RUFY3Q7L099 469 aa21.05■□□□□ 0.96
UBE2D4-208ENST00000454350 TMEM192Q8IY95 271 aa21.05■□□□□ 0.96
UBE2D4-208ENST00000454350 ZNF689Q96CS4 500 aaPredicted RBP21.05■□□□□ 0.96
UBE2D4-208ENST00000454350 MRPL38Q96DV4 380 aaKnown RBP21.05■□□□□ 0.96
UBE2D4-208ENST00000454350 TRPV2Q9Y5S1 764 aa21.05■□□□□ 0.96
UBE2D4-208ENST00000454350 IGSF9BQ9UPX0 1349 aa21.04■□□□□ 0.96
UBE2D4-208ENST00000454350 KDM3AQ9Y4C1 1321 aa21.04■□□□□ 0.96
UBE2D4-208ENST00000454350 CCT2P78371 535 aaKnown RBP21.04■□□□□ 0.96
UBE2D4-208ENST00000454350 IER5Q5VY09 327 aa21.04■□□□□ 0.96
UBE2D4-208ENST00000454350 MCTP2Q6DN12 878 aa21.04■□□□□ 0.96
UBE2D4-208ENST00000454350 ATP8B4Q8TF62 1192 aa21.04■□□□□ 0.96
UBE2D4-208ENST00000454350 CCDC12Q8WUD4 166 aaPredicted RBP21.04■□□□□ 0.96
UBE2D4-208ENST00000454350 IL17RAQ96F46 866 aa21.04■□□□□ 0.96
UBE2D4-208ENST00000454350 HBP1O60381 514 aa21.03■□□□□ 0.96
UBE2D4-208ENST00000454350 KLRC1P26715 233 aa21.03■□□□□ 0.96
UBE2D4-208ENST00000454350 GNA11P29992 359 aa21.03■□□□□ 0.96
UBE2D4-208ENST00000454350 TNPO1Q92973 898 aaKnown RBP21.03■□□□□ 0.96
UBE2D4-208ENST00000454350 ZNF577Q9BSK1 485 aa21.03■□□□□ 0.96
UBE2D4-208ENST00000454350 SLC26A6Q9BXS9 759 aa21.03■□□□□ 0.96
UBE2D4-208ENST00000454350 CELF4Q9BZC1 486 aaKnown RBP21.03■□□□□ 0.96
UBE2D4-208ENST00000454350 TMX1Q9H3N1 280 aa21.03■□□□□ 0.96
UBE2D4-208ENST00000454350 VPS54Q9P1Q0 977 aa21.03■□□□□ 0.96
UBE2D4-208ENST00000454350 PADI3Q9ULW8 664 aa21.03■□□□□ 0.96
UBE2D4-208ENST00000454350 MAFBQ9Y5Q3 323 aaPredicted RBP21.03■□□□□ 0.96
UBE2D4-208ENST00000454350 COL1A2P08123 1366 aa21.02■□□□□ 0.96
UBE2D4-208ENST00000454350 C5orf67F2Z3F1 127 aa21.02■□□□□ 0.96
UBE2D4-208ENST00000454350 DGKIO75912 1065 aa21.02■□□□□ 0.96
UBE2D4-208ENST00000454350 SETQ01105 290 aaPredicted RBP21.02■□□□□ 0.96
UBE2D4-208ENST00000454350 GPM6BQ13491 265 aa21.02■□□□□ 0.96
UBE2D4-208ENST00000454350 FAM160B1Q5W0V3 765 aa21.02■□□□□ 0.96
UBE2D4-208ENST00000454350 ZNF746Q6NUN9 644 aaPredicted RBP21.02■□□□□ 0.96
UBE2D4-208ENST00000454350 SWSAP1Q6NVH7 229 aa21.02■□□□□ 0.96
UBE2D4-208ENST00000454350 KIAA0319LQ8IZA0 1049 aa21.02■□□□□ 0.96
UBE2D4-208ENST00000454350 NME8Q8N427 588 aa21.02■□□□□ 0.96
UBE2D4-208ENST00000454350 IL27Q8NEV9 243 aa21.02■□□□□ 0.96
UBE2D4-208ENST00000454350 CLP1Q92989 425 aaKnown RBP21.02■□□□□ 0.96
UBE2D4-208ENST00000454350 UBE2ZQ9H832 354 aaPredicted RBP21.02■□□□□ 0.96
UBE2D4-208ENST00000454350 CDHR5Q9HBB8 845 aa21.02■□□□□ 0.96
UBE2D4-208ENST00000454350 ZNF302Q9NR11 478 aa21.02■□□□□ 0.96
UBE2D4-208ENST00000454350 TBC1D22BQ9NU19 505 aa21.02■□□□□ 0.96
UBE2D4-208ENST00000454350 ADGRA3Q8IWK6 1321 aa21.02■□□□□ 0.95
UBE2D4-208ENST00000454350 PLXNA4Q9HCM2 1894 aa21.01■□□□□ 0.95
UBE2D4-208ENST00000454350 BACH1O14867 736 aa21.01■□□□□ 0.95
UBE2D4-208ENST00000454350 PRR16Q569H4 304 aa21.01■□□□□ 0.95
UBE2D4-208ENST00000454350 MIS18BP1Q6P0N0 1132 aa21.01■□□□□ 0.95
UBE2D4-208ENST00000454350 PDXDC2PQ6P474 469 aa21.01■□□□□ 0.95
UBE2D4-208ENST00000454350 FIBCD1Q8N539 461 aa21.01■□□□□ 0.95
UBE2D4-208ENST00000454350 TM6SF1Q9BZW5 370 aa21.01■□□□□ 0.95
UBE2D4-208ENST00000454350 SH3GLB2Q9NR46 395 aa21.01■□□□□ 0.95
UBE2D4-208ENST00000454350 KRT76Q01546 638 aa21■□□□□ 0.95
UBE2D4-208ENST00000454350 COL19A1Q14993 1142 aa21■□□□□ 0.95
UBE2D4-208ENST00000454350 NPY5RQ15761 445 aa21■□□□□ 0.95
UBE2D4-208ENST00000454350 ZNF484Q5JVG2 852 aa21■□□□□ 0.95
UBE2D4-208ENST00000454350 TMEM40Q8WWA1 233 aa21■□□□□ 0.95
UBE2D4-208ENST00000454350 LARP6Q9BRS8 491 aaKnown RBP21■□□□□ 0.95
UBE2D4-208ENST00000454350 FTHL17Q9BXU8 183 aa21■□□□□ 0.95
UBE2D4-208ENST00000454350 M0R2N6 131 aa20.99■□□□□ 0.95
UBE2D4-208ENST00000454350 C22orf31O95567 290 aa20.99■□□□□ 0.95
UBE2D4-208ENST00000454350 BMPR1AP36894 532 aa20.99■□□□□ 0.95
UBE2D4-208ENST00000454350 AKAP17AQ02040 695 aaKnown RBP20.99■□□□□ 0.95
UBE2D4-208ENST00000454350 SMAP1Q8IYB5 467 aaPredicted RBP20.99■□□□□ 0.95
UBE2D4-208ENST00000454350 CCDC148Q8NFR7 591 aa20.99■□□□□ 0.95
UBE2D4-208ENST00000454350 BICD2Q8TD16 824 aa20.99■□□□□ 0.95
Retrieved 100 of 20,778 RNA–protein pairs in 23.7 ms