RNA–Protein interactions for RNA: ENST00000448310.1

CBX4-202, Transcript of chromobox 4, humanhuman

APPRIS ALT2 TSL 3 BASIC

Gene CBX4, Length 718 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CBX4-202ENST00000448310 GADD45GIP1Q8TAE8 222 aaPredicted RBP32.21■■■□□ 2.75
CBX4-202ENST00000448310 TNPO1Q92973 898 aaKnown RBP32.21■■■□□ 2.75
CBX4-202ENST00000448310 BRF1Q92994 677 aa32.21■■■□□ 2.75
CBX4-202ENST00000448310 EPHX3Q9H6B9 360 aa32.21■■■□□ 2.75
CBX4-202ENST00000448310 KIAA1671Q9BY89 1806 aa32.21■■■□□ 2.75
CBX4-202ENST00000448310 M0QZ92 97 aa32.2■■■□□ 2.75
CBX4-202ENST00000448310 RPLP2P05387 115 aaKnown RBP32.2■■■□□ 2.75
CBX4-202ENST00000448310 NIPA1Q7RTP0 329 aa32.2■■■□□ 2.75
CBX4-202ENST00000448310 KHSRPQ92945 711 aaKnown RBP eCLIP32.2■■■□□ 2.75
CBX4-202ENST00000448310 KCNB2Q92953 911 aa32.2■■■□□ 2.75
CBX4-202ENST00000448310 SNX14Q9Y5W7 946 aa32.2■■■□□ 2.75
CBX4-202ENST00000448310 MYH9P35579 1960 aaKnown RBP32.19■■■□□ 2.74
CBX4-202ENST00000448310 BACH1O14867 736 aa32.19■■■□□ 2.74
CBX4-202ENST00000448310 MTHFD1LQ6UB35 978 aa32.19■■■□□ 2.74
CBX4-202ENST00000448310 ABHD15Q6UXT9 468 aa32.19■■■□□ 2.74
CBX4-202ENST00000448310 RTN4RL1Q86UN2 441 aaPredicted RBP32.19■■■□□ 2.74
CBX4-202ENST00000448310 CD320Q9NPF0 282 aa32.19■■■□□ 2.74
CBX4-202ENST00000448310 IGLV3-22A0A075B6J6 115 aa32.18■■■□□ 2.74
CBX4-202ENST00000448310 IGKV6D-21A0A0A0MT36 114 aa32.18■■■□□ 2.74
CBX4-202ENST00000448310 HSPA4P34932 840 aa32.18■■■□□ 2.74
CBX4-202ENST00000448310 BMPR1AP36894 532 aa32.18■■■□□ 2.74
CBX4-202ENST00000448310 BTG3Q14201 252 aaPredicted RBP32.18■■■□□ 2.74
CBX4-202ENST00000448310 CCDC60Q8IWA6 550 aaPredicted RBP32.18■■■□□ 2.74
CBX4-202ENST00000448310 CRYGNQ8WXF5 182 aa32.18■■■□□ 2.74
CBX4-202ENST00000448310 ZNF689Q96CS4 500 aaPredicted RBP32.18■■■□□ 2.74
CBX4-202ENST00000448310 C1QTNF1Q9BXJ1 281 aa32.18■■■□□ 2.74
CBX4-202ENST00000448310 CELF4Q9BZC1 486 aaKnown RBP32.18■■■□□ 2.74
CBX4-202ENST00000448310 NSUN3Q9H649 340 aaKnown RBP32.18■■■□□ 2.74
CBX4-202ENST00000448310 PADI3Q9ULW8 664 aa32.18■■■□□ 2.74
CBX4-202ENST00000448310 CCDC196A0A1B0GTZ2 297 aa32.17■■■□□ 2.74
CBX4-202ENST00000448310 SMIM35A0A1B0GVV1 85 aa32.17■■■□□ 2.74
CBX4-202ENST00000448310 H3BQ06 376 aaPredicted RBP32.17■■■□□ 2.74
CBX4-202ENST00000448310 GRM6O15303 877 aa32.17■■■□□ 2.74
CBX4-202ENST00000448310 DHX15O43143 795 aaKnown RBP32.17■■■□□ 2.74
CBX4-202ENST00000448310 PPFIA3O75145 1194 aa32.17■■■□□ 2.74
CBX4-202ENST00000448310 DGKIO75912 1065 aa32.17■■■□□ 2.74
CBX4-202ENST00000448310 IL9P15248 144 aa32.17■■■□□ 2.74
CBX4-202ENST00000448310 PKN1Q16512 942 aa32.17■■■□□ 2.74
CBX4-202ENST00000448310 BLOC1S2Q6QNY1 142 aa32.17■■■□□ 2.74
CBX4-202ENST00000448310 EP400NLQ6ZTU2 488 aa32.17■■■□□ 2.74
CBX4-202ENST00000448310 SQORQ9Y6N5 450 aa32.17■■■□□ 2.74
CBX4-202ENST00000448310 IGSF9BQ9UPX0 1349 aa32.17■■■□□ 2.74
CBX4-202ENST00000448310 C5orf67F2Z3F1 127 aa32.16■■■□□ 2.74
CBX4-202ENST00000448310 CSPG5O95196 566 aa32.16■■■□□ 2.74
CBX4-202ENST00000448310 KLRC1P26715 233 aa32.16■■■□□ 2.74
CBX4-202ENST00000448310 SLC26A2P50443 739 aa32.16■■■□□ 2.74
CBX4-202ENST00000448310 PAK2Q13177 524 aa32.16■■■□□ 2.74
CBX4-202ENST00000448310 FAM160B1Q5W0V3 765 aa32.16■■■□□ 2.74
CBX4-202ENST00000448310 PTCRAQ6ISU1 281 aaPredicted RBP32.16■■■□□ 2.74
CBX4-202ENST00000448310 PHKBQ93100 1093 aa32.16■■■□□ 2.74
CBX4-202ENST00000448310 ZMYND12Q9H0C1 365 aa32.16■■■□□ 2.74
CBX4-202ENST00000448310 WDR81Q562E7 1941 aa32.16■■■□□ 2.74
CBX4-202ENST00000448310 ESYT2A0FGR8 921 aa32.15■■■□□ 2.74
CBX4-202ENST00000448310 RB1P06400 928 aa32.15■■■□□ 2.74
CBX4-202ENST00000448310 CYP3A4P08684 503 aa32.15■■■□□ 2.74
CBX4-202ENST00000448310 KRT76Q01546 638 aa32.15■■■□□ 2.74
CBX4-202ENST00000448310 TMEM266Q2M3C6 531 aa32.15■■■□□ 2.74
CBX4-202ENST00000448310 ATP8B4Q8TF62 1192 aa32.15■■■□□ 2.74
CBX4-202ENST00000448310 CLP1Q92989 425 aaKnown RBP32.15■■■□□ 2.74
CBX4-202ENST00000448310 C11orf84Q9BUA3 381 aaPredicted RBP32.15■■■□□ 2.74
CBX4-202ENST00000448310 FTHL17Q9BXU8 183 aa32.15■■■□□ 2.74
CBX4-202ENST00000448310 C6orf50Q9HD87 102 aa32.15■■■□□ 2.74
CBX4-202ENST00000448310 ZNF302Q9NR11 478 aa32.15■■■□□ 2.74
CBX4-202ENST00000448310 GINS2Q9Y248 185 aa32.15■■■□□ 2.74
CBX4-202ENST00000448310 RWDD3Q9Y3V2 267 aa32.15■■■□□ 2.74
CBX4-202ENST00000448310 NID2Q14112 1375 aa32.15■■■□□ 2.74
CBX4-202ENST00000448310 IPO5O00410 1097 aaKnown RBP32.14■■■□□ 2.74
CBX4-202ENST00000448310 HBP1O60381 514 aa32.14■■■□□ 2.74
CBX4-202ENST00000448310 SWSAP1Q6NVH7 229 aa32.14■■■□□ 2.74
CBX4-202ENST00000448310 PDXDC2PQ6P474 469 aa32.14■■■□□ 2.74
CBX4-202ENST00000448310 REXO1Q8N1G1 1221 aaKnown RBP32.14■■■□□ 2.74
CBX4-202ENST00000448310 NEK9Q8TD19 979 aa32.14■■■□□ 2.74
CBX4-202ENST00000448310 RASGRP4Q8TDF6 673 aa32.14■■■□□ 2.74
CBX4-202ENST00000448310 PRPF3O43395 683 aaKnown RBP32.13■■■□□ 2.73
CBX4-202ENST00000448310 ATP4AP20648 1035 aa32.13■■■□□ 2.73
CBX4-202ENST00000448310 IBSPP21815 317 aaPredicted RBP32.13■■■□□ 2.73
CBX4-202ENST00000448310 RPS6KB1P23443 525 aa32.13■■■□□ 2.73
CBX4-202ENST00000448310 MIS18BP1Q6P0N0 1132 aa32.13■■■□□ 2.73
CBX4-202ENST00000448310 FAM178BQ8IXR5 827 aa32.13■■■□□ 2.73
CBX4-202ENST00000448310 CRIPAKQ8N1N5 446 aa32.13■■■□□ 2.73
CBX4-202ENST00000448310 NME8Q8N427 588 aa32.13■■■□□ 2.73
CBX4-202ENST00000448310 PABPC5Q96DU9 382 aaKnown RBP32.13■■■□□ 2.73
CBX4-202ENST00000448310 ZNF577Q9BSK1 485 aa32.13■■■□□ 2.73
CBX4-202ENST00000448310 TMX1Q9H3N1 280 aa32.13■■■□□ 2.73
CBX4-202ENST00000448310 KDM3AQ9Y4C1 1321 aa32.13■■■□□ 2.73
CBX4-202ENST00000448310 MRPL42Q9Y6G3 142 aaKnown RBP32.13■■■□□ 2.73
CBX4-202ENST00000448310 PAN2Q504Q3 1202 aaKnown RBP32.12■■■□□ 2.73
CBX4-202ENST00000448310 NPAS4Q8IUM7 802 aa32.12■■■□□ 2.73
CBX4-202ENST00000448310 CCDC12Q8WUD4 166 aaPredicted RBP32.12■■■□□ 2.73
CBX4-202ENST00000448310 CDHR5Q9HBB8 845 aa32.12■■■□□ 2.73
CBX4-202ENST00000448310 GRXCR2A6NFK2 248 aa32.11■■■□□ 2.73
CBX4-202ENST00000448310 GATMP50440 423 aa32.11■■■□□ 2.73
CBX4-202ENST00000448310 NFX1Q12986 1120 aaKnown RBP32.11■■■□□ 2.73
CBX4-202ENST00000448310 TRMT1LQ7Z2T5 733 aaKnown RBP32.11■■■□□ 2.73
CBX4-202ENST00000448310 KIAA0319LQ8IZA0 1049 aa32.11■■■□□ 2.73
CBX4-202ENST00000448310 LMAN2LQ9H0V9 348 aa32.11■■■□□ 2.73
CBX4-202ENST00000448310 ALG13Q9NP73 1137 aaKnown RBP32.11■■■□□ 2.73
CBX4-202ENST00000448310 CLDND1Q9NY35 253 aa32.11■■■□□ 2.73
CBX4-202ENST00000448310 COL1A2P08123 1366 aa32.1■■■□□ 2.73
CBX4-202ENST00000448310 ZBTB42B2RXF5 422 aa32.1■■■□□ 2.73
Retrieved 100 of 20,778 RNA–protein pairs in 16.6 ms