RNA–Protein interactions for RNA: ENST00000438571.5

GTF3A-204, Transcript of general transcription factor IIIA, humanhuman

TSL 5

Gene GTF3A, Length 792 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF3A-204ENST00000438571 PTCRAQ6ISU1 281 aaPredicted RBP20.71■□□□□ 0.91
GTF3A-204ENST00000438571 PLPPR4Q7Z2D5 763 aa20.71■□□□□ 0.91
GTF3A-204ENST00000438571 CCDC60Q8IWA6 550 aaPredicted RBP20.71■□□□□ 0.91
GTF3A-204ENST00000438571 LRFN3Q9BTN0 628 aa20.71■□□□□ 0.91
GTF3A-204ENST00000438571 C1QTNF1Q9BXJ1 281 aa20.71■□□□□ 0.91
GTF3A-204ENST00000438571 NSUN3Q9H649 340 aaKnown RBP20.71■□□□□ 0.91
GTF3A-204ENST00000438571 PCDHA2Q9Y5H9 948 aa20.71■□□□□ 0.91
GTF3A-204ENST00000438571 IGLV3-22A0A075B6J6 115 aa20.7■□□□□ 0.9
GTF3A-204ENST00000438571 IGKV6D-21A0A0A0MT36 114 aa20.7■□□□□ 0.9
GTF3A-204ENST00000438571 POTEB3A0JP26 581 aa20.7■□□□□ 0.9
GTF3A-204ENST00000438571 C5orf67F2Z3F1 127 aa20.7■□□□□ 0.9
GTF3A-204ENST00000438571 hCG_1984214I3L0E3 225 aa20.7■□□□□ 0.9
GTF3A-204ENST00000438571 PPFIA3O75145 1194 aa20.7■□□□□ 0.9
GTF3A-204ENST00000438571 DGKIO75912 1065 aa20.7■□□□□ 0.9
GTF3A-204ENST00000438571 FOSP01100 380 aaPredicted RBP20.7■□□□□ 0.9
GTF3A-204ENST00000438571 BMPR1AP36894 532 aa20.7■□□□□ 0.9
GTF3A-204ENST00000438571 GATMP50440 423 aa20.7■□□□□ 0.9
GTF3A-204ENST00000438571 BTG3Q14201 252 aaPredicted RBP20.7■□□□□ 0.9
GTF3A-204ENST00000438571 PFKFB3Q16875 520 aaPredicted RBP20.7■□□□□ 0.9
GTF3A-204ENST00000438571 TMEM266Q2M3C6 531 aa20.7■□□□□ 0.9
GTF3A-204ENST00000438571 POTEBQ6S5H4 581 aa20.7■□□□□ 0.9
GTF3A-204ENST00000438571 MTHFD1LQ6UB35 978 aa20.7■□□□□ 0.9
GTF3A-204ENST00000438571 EP400NLQ6ZTU2 488 aa20.7■□□□□ 0.9
GTF3A-204ENST00000438571 Q6ZUG5 572 aa20.7■□□□□ 0.9
GTF3A-204ENST00000438571 FAM178BQ8IXR5 827 aa20.7■□□□□ 0.9
GTF3A-204ENST00000438571 CRIPAKQ8N1N5 446 aa20.7■□□□□ 0.9
GTF3A-204ENST00000438571 ZNF713Q8N859 430 aaPredicted RBP20.7■□□□□ 0.9
GTF3A-204ENST00000438571 CRYGNQ8WXF5 182 aa20.7■□□□□ 0.9
GTF3A-204ENST00000438571 CLP1Q92989 425 aaKnown RBP20.7■□□□□ 0.9
GTF3A-204ENST00000438571 TMX1Q9H3N1 280 aa20.7■□□□□ 0.9
GTF3A-204ENST00000438571 PADI3Q9ULW8 664 aa20.7■□□□□ 0.9
GTF3A-204ENST00000438571 MRPL42Q9Y6G3 142 aaKnown RBP20.7■□□□□ 0.9
GTF3A-204ENST00000438571 IGSF9BQ9UPX0 1349 aa20.7■□□□□ 0.9
GTF3A-204ENST00000438571 DHX15O43143 795 aaKnown RBP20.69■□□□□ 0.9
GTF3A-204ENST00000438571 ATP4AP20648 1035 aa20.69■□□□□ 0.9
GTF3A-204ENST00000438571 GTF2F1P35269 517 aaKnown RBP eCLIP20.69■□□□□ 0.9
GTF3A-204ENST00000438571 METAP2P50579 478 aaKnown RBP eCLIP20.69■□□□□ 0.9
GTF3A-204ENST00000438571 COL19A1Q14993 1142 aa20.69■□□□□ 0.9
GTF3A-204ENST00000438571 PKN1Q16512 942 aa20.69■□□□□ 0.9
GTF3A-204ENST00000438571 PAN2Q504Q3 1202 aaKnown RBP20.69■□□□□ 0.9
GTF3A-204ENST00000438571 ABHD15Q6UXT9 468 aa20.69■□□□□ 0.9
GTF3A-204ENST00000438571 PLA2G4DQ86XP0 818 aa20.69■□□□□ 0.9
GTF3A-204ENST00000438571 PABPC5Q96DU9 382 aaKnown RBP20.69■□□□□ 0.9
GTF3A-204ENST00000438571 CDHR5Q9HBB8 845 aa20.69■□□□□ 0.9
GTF3A-204ENST00000438571 SMIM35A0A1B0GVV1 85 aa20.68■□□□□ 0.9
GTF3A-204ENST00000438571 GRXCR2A6NFK2 248 aa20.68■□□□□ 0.9
GTF3A-204ENST00000438571 MGEA5O60502 916 aa20.68■□□□□ 0.9
GTF3A-204ENST00000438571 SCG2P13521 617 aa20.68■□□□□ 0.9
GTF3A-204ENST00000438571 IBSPP21815 317 aaPredicted RBP20.68■□□□□ 0.9
GTF3A-204ENST00000438571 ZNF76P36508 570 aa20.68■□□□□ 0.9
GTF3A-204ENST00000438571 KRT32Q14532 448 aa20.68■□□□□ 0.9
GTF3A-204ENST00000438571 IER5Q5VY09 327 aa20.68■□□□□ 0.9
GTF3A-204ENST00000438571 RASGRP4Q8TDF6 673 aa20.68■□□□□ 0.9
GTF3A-204ENST00000438571 TMEM40Q8WWA1 233 aa20.68■□□□□ 0.9
GTF3A-204ENST00000438571 KCNB2Q92953 911 aa20.68■□□□□ 0.9
GTF3A-204ENST00000438571 BRF1Q92994 677 aa20.68■□□□□ 0.9
GTF3A-204ENST00000438571 JAKMIP1Q96N16 626 aaKnown RBP20.68■□□□□ 0.9
GTF3A-204ENST00000438571 PPP1R16BQ96T49 567 aa20.68■□□□□ 0.9
GTF3A-204ENST00000438571 CELF4Q9BZC1 486 aaKnown RBP20.68■□□□□ 0.9
GTF3A-204ENST00000438571 ALG13Q9NP73 1137 aaKnown RBP20.68■□□□□ 0.9
GTF3A-204ENST00000438571 CLDND1Q9NY35 253 aa20.68■□□□□ 0.9
GTF3A-204ENST00000438571 SNX14Q9Y5W7 946 aa20.68■□□□□ 0.9
GTF3A-204ENST00000438571 NID2Q14112 1375 aa20.68■□□□□ 0.9
GTF3A-204ENST00000438571 ZBTB42B2RXF5 422 aa20.67■□□□□ 0.9
GTF3A-204ENST00000438571 M0QZ92 97 aa20.67■□□□□ 0.9
GTF3A-204ENST00000438571 BACH1O14867 736 aa20.67■□□□□ 0.9
GTF3A-204ENST00000438571 DNAJB1P25685 340 aa20.67■□□□□ 0.9
GTF3A-204ENST00000438571 KLRC1P26715 233 aa20.67■□□□□ 0.9
GTF3A-204ENST00000438571 LTBRP36941 435 aa20.67■□□□□ 0.9
GTF3A-204ENST00000438571 DLX2Q07687 328 aaPredicted RBP20.67■□□□□ 0.9
GTF3A-204ENST00000438571 HYAL1Q12794 435 aa20.67■□□□□ 0.9
GTF3A-204ENST00000438571 PAK2Q13177 524 aa20.67■□□□□ 0.9
GTF3A-204ENST00000438571 CAMK1Q14012 370 aa20.67■□□□□ 0.9
GTF3A-204ENST00000438571 NIPA1Q7RTP0 329 aa20.67■□□□□ 0.9
GTF3A-204ENST00000438571 PHKBQ93100 1093 aa20.67■□□□□ 0.9
GTF3A-204ENST00000438571 C11orf84Q9BUA3 381 aaPredicted RBP20.67■□□□□ 0.9
GTF3A-204ENST00000438571 RB1P06400 928 aa20.66■□□□□ 0.9
GTF3A-204ENST00000438571 RCAN1P53805 252 aa20.66■□□□□ 0.9
GTF3A-204ENST00000438571 KRT76Q01546 638 aa20.66■□□□□ 0.9
GTF3A-204ENST00000438571 CLUL1Q15846 466 aa20.66■□□□□ 0.9
GTF3A-204ENST00000438571 TRMT1LQ7Z2T5 733 aaKnown RBP20.66■□□□□ 0.9
GTF3A-204ENST00000438571 NPAS4Q8IUM7 802 aa20.66■□□□□ 0.9
GTF3A-204ENST00000438571 GJD3Q8N144 294 aa20.66■□□□□ 0.9
GTF3A-204ENST00000438571 ATP8B4Q8TF62 1192 aa20.66■□□□□ 0.9
GTF3A-204ENST00000438571 ZNF302Q9NR11 478 aa20.66■□□□□ 0.9
GTF3A-204ENST00000438571 GINS2Q9Y248 185 aa20.66■□□□□ 0.9
GTF3A-204ENST00000438571 SQORQ9Y6N5 450 aa20.66■□□□□ 0.9
GTF3A-204ENST00000438571 KDM3AQ9Y4C1 1321 aa20.66■□□□□ 0.9
GTF3A-204ENST00000438571 LINC01565O15544 149 aa20.65■□□□□ 0.9
GTF3A-204ENST00000438571 EDIL3O43854 480 aa20.65■□□□□ 0.9
GTF3A-204ENST00000438571 HBP1O60381 514 aa20.65■□□□□ 0.9
GTF3A-204ENST00000438571 CYP3A4P08684 503 aa20.65■□□□□ 0.9
GTF3A-204ENST00000438571 HSPA4P34932 840 aa20.65■□□□□ 0.9
GTF3A-204ENST00000438571 FGD1P98174 961 aa20.65■□□□□ 0.9
GTF3A-204ENST00000438571 NFX1Q12986 1120 aaKnown RBP20.65■□□□□ 0.9
GTF3A-204ENST00000438571 SWSAP1Q6NVH7 229 aa20.65■□□□□ 0.9
GTF3A-204ENST00000438571 PDXDC2PQ6P474 469 aa20.65■□□□□ 0.9
GTF3A-204ENST00000438571 FTHL17Q9BXU8 183 aa20.65■□□□□ 0.9
GTF3A-204ENST00000438571 ZMYND12Q9H0C1 365 aa20.65■□□□□ 0.9
GTF3A-204ENST00000438571 ERVK-5Q9HDB9 667 aa20.65■□□□□ 0.9
Retrieved 100 of 20,778 RNA–protein pairs in 42.9 ms