RNA–Protein interactions for RNA: ENST00000429846.1

MSH5-208, Transcript of mutS homolog 5, humanhuman

TSL 3

Gene MSH5, Length 616 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH5-208ENST00000429846 PLVAPQ9BX97 442 aa16.97■□□□□ 0.31
MSH5-208ENST00000429846 AGO3Q9H9G7 860 aaKnown RBP16.97■□□□□ 0.31
MSH5-208ENST00000429846 FAM50BQ9Y247 325 aa16.97■□□□□ 0.31
MSH5-208ENST00000429846 KIAA1671Q9BY89 1806 aa16.97■□□□□ 0.31
MSH5-208ENST00000429846 IGKV6D-21A0A0A0MT36 114 aa16.96■□□□□ 0.31
MSH5-208ENST00000429846 ESYT2A0FGR8 921 aa16.96■□□□□ 0.31
MSH5-208ENST00000429846 DGKIO75912 1065 aa16.96■□□□□ 0.31
MSH5-208ENST00000429846 CD52P31358 61 aa16.96■□□□□ 0.31
MSH5-208ENST00000429846 ZNF76P36508 570 aa16.96■□□□□ 0.31
MSH5-208ENST00000429846 METAP2P50579 478 aaKnown RBP eCLIP16.96■□□□□ 0.31
MSH5-208ENST00000429846 FGD1P98174 961 aa16.96■□□□□ 0.31
MSH5-208ENST00000429846 BTG3Q14201 252 aaPredicted RBP16.96■□□□□ 0.31
MSH5-208ENST00000429846 PFKFB3Q16875 520 aaPredicted RBP16.96■□□□□ 0.31
MSH5-208ENST00000429846 TMEM31Q5JXX7 168 aa16.96■□□□□ 0.31
MSH5-208ENST00000429846 FAM160B1Q5W0V3 765 aa16.96■□□□□ 0.31
MSH5-208ENST00000429846 NPAS4Q8IUM7 802 aa16.96■□□□□ 0.31
MSH5-208ENST00000429846 CCDC12Q8WUD4 166 aaPredicted RBP16.96■□□□□ 0.31
MSH5-208ENST00000429846 EPHX3Q9H6B9 360 aa16.96■□□□□ 0.31
MSH5-208ENST00000429846 FAM217BQ9NTX9 383 aaPredicted RBP16.96■□□□□ 0.31
MSH5-208ENST00000429846 COL1A2P08123 1366 aa16.96■□□□□ 0.31
MSH5-208ENST00000429846 NID2Q14112 1375 aa16.96■□□□□ 0.31
MSH5-208ENST00000429846 MYH9P35579 1960 aaKnown RBP16.96■□□□□ 0.31
MSH5-208ENST00000429846 GRXCR2A6NFK2 248 aa16.95■□□□□ 0.3
MSH5-208ENST00000429846 HBP1O60381 514 aa16.95■□□□□ 0.3
MSH5-208ENST00000429846 CYP3A4P08684 503 aa16.95■□□□□ 0.3
MSH5-208ENST00000429846 STAG3L1P0CL83 205 aa16.95■□□□□ 0.3
MSH5-208ENST00000429846 SCG2P13521 617 aa16.95■□□□□ 0.3
MSH5-208ENST00000429846 CDC27P30260 824 aa16.95■□□□□ 0.3
MSH5-208ENST00000429846 SETQ01105 290 aaPredicted RBP16.95■□□□□ 0.3
MSH5-208ENST00000429846 PAK2Q13177 524 aa16.95■□□□□ 0.3
MSH5-208ENST00000429846 MTHFD1LQ6UB35 978 aa16.95■□□□□ 0.3
MSH5-208ENST00000429846 CMTR2Q8IYT2 770 aaKnown RBP16.95■□□□□ 0.3
MSH5-208ENST00000429846 GJD3Q8N144 294 aa16.95■□□□□ 0.3
MSH5-208ENST00000429846 LINC01599Q8WXQ3 324 aa16.95■□□□□ 0.3
MSH5-208ENST00000429846 P2RX5Q93086 422 aa16.95■□□□□ 0.3
MSH5-208ENST00000429846 CELF4Q9BZC1 486 aaKnown RBP16.95■□□□□ 0.3
MSH5-208ENST00000429846 ARIH1Q9Y4X5 557 aaPredicted RBP16.95■□□□□ 0.3
MSH5-208ENST00000429846 MYO7AQ13402 2215 aa16.94■□□□□ 0.3
MSH5-208ENST00000429846 PI4K2BG5E9Z4 385 aa16.94■□□□□ 0.3
MSH5-208ENST00000429846 BACH1O14867 736 aa16.94■□□□□ 0.3
MSH5-208ENST00000429846 GPR37L1O60883 481 aa16.94■□□□□ 0.3
MSH5-208ENST00000429846 MMP1P03956 469 aa16.94■□□□□ 0.3
MSH5-208ENST00000429846 IL9P15248 144 aa16.94■□□□□ 0.3
MSH5-208ENST00000429846 KRT76Q01546 638 aa16.94■□□□□ 0.3
MSH5-208ENST00000429846 NAALADL2Q58DX5 795 aa16.94■□□□□ 0.3
MSH5-208ENST00000429846 ABHD15Q6UXT9 468 aa16.94■□□□□ 0.3
MSH5-208ENST00000429846 PLA2G4DQ86XP0 818 aa16.94■□□□□ 0.3
MSH5-208ENST00000429846 CRIPAKQ8N1N5 446 aa16.94■□□□□ 0.3
MSH5-208ENST00000429846 ATP8B4Q8TF62 1192 aa16.94■□□□□ 0.3
MSH5-208ENST00000429846 TRAPPC12Q8WVT3 735 aa16.94■□□□□ 0.3
MSH5-208ENST00000429846 CRYGNQ8WXF5 182 aa16.94■□□□□ 0.3
MSH5-208ENST00000429846 ZBTB10Q96DT7 871 aa16.94■□□□□ 0.3
MSH5-208ENST00000429846 LRFN3Q9BTN0 628 aa16.94■□□□□ 0.3
MSH5-208ENST00000429846 ZMYND12Q9H0C1 365 aa16.94■□□□□ 0.3
MSH5-208ENST00000429846 TMEM260Q9NX78 707 aa16.94■□□□□ 0.3
MSH5-208ENST00000429846 PADI3Q9ULW8 664 aa16.94■□□□□ 0.3
MSH5-208ENST00000429846 IGLV3-22A0A075B6J6 115 aa16.93■□□□□ 0.3
MSH5-208ENST00000429846 FAM86B1E9PN63 330 aa16.93■□□□□ 0.3
MSH5-208ENST00000429846 H3BQ06 376 aaPredicted RBP16.93■□□□□ 0.3
MSH5-208ENST00000429846 IPO5O00410 1097 aaKnown RBP16.93■□□□□ 0.3
MSH5-208ENST00000429846 CCNE2O96020 404 aa16.93■□□□□ 0.3
MSH5-208ENST00000429846 FAM86B2P0C5J1 330 aa16.93■□□□□ 0.3
MSH5-208ENST00000429846 PLA2G5P39877 138 aa16.93■□□□□ 0.3
MSH5-208ENST00000429846 TMEM62Q0P6H9 643 aa16.93■□□□□ 0.3
MSH5-208ENST00000429846 ODR4Q5SWX8 454 aa16.93■□□□□ 0.3
MSH5-208ENST00000429846 MIS18BP1Q6P0N0 1132 aa16.93■□□□□ 0.3
MSH5-208ENST00000429846 CCDC60Q8IWA6 550 aaPredicted RBP16.93■□□□□ 0.3
MSH5-208ENST00000429846 REXO1Q8N1G1 1221 aaKnown RBP16.93■□□□□ 0.3
MSH5-208ENST00000429846 KCNB2Q92953 911 aa16.93■□□□□ 0.3
MSH5-208ENST00000429846 PPP2R3CQ969Q6 453 aa16.93■□□□□ 0.3
MSH5-208ENST00000429846 C6orf50Q9HD87 102 aa16.93■□□□□ 0.3
MSH5-208ENST00000429846 CD320Q9NPF0 282 aa16.93■□□□□ 0.3
MSH5-208ENST00000429846 ZNF302Q9NR11 478 aa16.93■□□□□ 0.3
MSH5-208ENST00000429846 TBC1D22BQ9NU19 505 aa16.93■□□□□ 0.3
MSH5-208ENST00000429846 RNF216Q9NWF9 866 aaPredicted RBP16.93■□□□□ 0.3
MSH5-208ENST00000429846 CLDND1Q9NY35 253 aa16.93■□□□□ 0.3
MSH5-208ENST00000429846 PRKAG3Q9UGI9 489 aa16.93■□□□□ 0.3
MSH5-208ENST00000429846 TCEAL9Q9UHQ7 104 aa16.93■□□□□ 0.3
MSH5-208ENST00000429846 RAPGEFL1Q9UHV5 662 aa16.93■□□□□ 0.3
MSH5-208ENST00000429846 NAP1L2Q9ULW6 460 aaPredicted RBP16.93■□□□□ 0.3
MSH5-208ENST00000429846 HCN4Q9Y3Q4 1203 aa16.93■□□□□ 0.3
MSH5-208ENST00000429846 EVPLQ92817 2033 aa16.92■□□□□ 0.3
MSH5-208ENST00000429846 DDX39AO00148 427 aaKnown RBP16.92■□□□□ 0.3
MSH5-208ENST00000429846 GRM6O15303 877 aa16.92■□□□□ 0.3
MSH5-208ENST00000429846 KLRC1P26715 233 aa16.92■□□□□ 0.3
MSH5-208ENST00000429846 GNA11P29992 359 aa16.92■□□□□ 0.3
MSH5-208ENST00000429846 SSTR3P32745 418 aaPredicted RBP16.92■□□□□ 0.3
MSH5-208ENST00000429846 ADD1P35611 737 aaKnown RBP16.92■□□□□ 0.3
MSH5-208ENST00000429846 CTC1Q2NKJ3 1217 aa16.92■□□□□ 0.3
MSH5-208ENST00000429846 ZNF484Q5JVG2 852 aa16.92■□□□□ 0.3
MSH5-208ENST00000429846 JAKMIP3Q5VZ66 844 aa16.92■□□□□ 0.3
MSH5-208ENST00000429846 ZNF746Q6NUN9 644 aaPredicted RBP16.92■□□□□ 0.3
MSH5-208ENST00000429846 PDXDC2PQ6P474 469 aa16.92■□□□□ 0.3
MSH5-208ENST00000429846 EP400NLQ6ZTU2 488 aa16.92■□□□□ 0.3
MSH5-208ENST00000429846 SKAP1Q86WV1 359 aa16.92■□□□□ 0.3
MSH5-208ENST00000429846 SMAP1Q8IYB5 467 aaPredicted RBP16.92■□□□□ 0.3
MSH5-208ENST00000429846 FBXL16Q8N461 479 aa16.92■□□□□ 0.3
MSH5-208ENST00000429846 KHSRPQ92945 711 aaKnown RBP eCLIP16.92■□□□□ 0.3
MSH5-208ENST00000429846 WDR81Q562E7 1941 aa16.92■□□□□ 0.3
MSH5-208ENST00000429846 DHX15O43143 795 aaKnown RBP16.91■□□□□ 0.3
Retrieved 100 of 20,778 RNA–protein pairs in 64.3 ms