RNA–Protein interactions for RNA: ENST00000427494.6

APOBEC3D-202, Transcript of apolipoprotein B mRNA editing enzyme catalytic subunit 3D, humanhuman

TSL 1 (best) BASIC

Gene APOBEC3D, Length 1,961 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APOBEC3D-202ENST00000427494 NEK9Q8TD19 979 aa15.42■□□□□ 0.06
APOBEC3D-202ENST00000427494 GOLGA1Q92805 767 aa15.42■□□□□ 0.06
APOBEC3D-202ENST00000427494 ZKSCAN4Q969J2 545 aaPredicted RBP15.42■□□□□ 0.06
APOBEC3D-202ENST00000427494 WRNIP1Q96S55 665 aa15.42■□□□□ 0.06
APOBEC3D-202ENST00000427494 CRACR2AQ9BSW2 395 aa15.42■□□□□ 0.06
APOBEC3D-202ENST00000427494 DEF6Q9H4E7 631 aa15.42■□□□□ 0.06
APOBEC3D-202ENST00000427494 PARVGQ9HBI0 331 aa15.42■□□□□ 0.06
APOBEC3D-202ENST00000427494 CEP72Q9P209 647 aa15.42■□□□□ 0.06
APOBEC3D-202ENST00000427494 UBIAD1Q9Y5Z9 338 aa15.42■□□□□ 0.06
APOBEC3D-202ENST00000427494 RCCD1A6NED2 376 aa15.41■□□□□ 0.06
APOBEC3D-202ENST00000427494 EIF3DO15371 548 aaKnown RBP eCLIP15.41■□□□□ 0.06
APOBEC3D-202ENST00000427494 NR3C1P04150 777 aa15.41■□□□□ 0.06
APOBEC3D-202ENST00000427494 EIF2AK2P19525 551 aaKnown RBP15.41■□□□□ 0.06
APOBEC3D-202ENST00000427494 NMT1P30419 496 aaKnown RBP15.41■□□□□ 0.06
APOBEC3D-202ENST00000427494 KIF11P52732 1056 aa15.41■□□□□ 0.06
APOBEC3D-202ENST00000427494 VAV2P52735 878 aa15.41■□□□□ 0.06
APOBEC3D-202ENST00000427494 KCNH2Q12809 1159 aa15.41■□□□□ 0.06
APOBEC3D-202ENST00000427494 PRAMEF18Q5VWM3 479 aa15.41■□□□□ 0.06
APOBEC3D-202ENST00000427494 RSRC2Q7L4I2 434 aaKnown RBP15.41■□□□□ 0.06
APOBEC3D-202ENST00000427494 APOBEC3FQ8IUX4 373 aaKnown RBP15.41■□□□□ 0.06
APOBEC3D-202ENST00000427494 CEP112Q8N8E3 955 aa15.41■□□□□ 0.06
APOBEC3D-202ENST00000427494 TRERF1Q96PN7 1200 aa15.41■□□□□ 0.06
APOBEC3D-202ENST00000427494 TAAR1Q96RJ0 339 aa15.41■□□□□ 0.06
APOBEC3D-202ENST00000427494 AS3MTQ9HBK9 375 aa15.41■□□□□ 0.06
APOBEC3D-202ENST00000427494 AGO4Q9HCK5 861 aaKnown RBP15.41■□□□□ 0.06
APOBEC3D-202ENST00000427494 NLRC4Q9NPP4 1024 aa15.41■□□□□ 0.06
APOBEC3D-202ENST00000427494 PICK1Q9NRD5 415 aa15.41■□□□□ 0.06
APOBEC3D-202ENST00000427494 MAP3K20Q9NYL2 800 aaKnown RBP15.41■□□□□ 0.06
APOBEC3D-202ENST00000427494 KCND2Q9NZV8 630 aa15.41■□□□□ 0.06
APOBEC3D-202ENST00000427494 ARMCX3Q9UH62 379 aaPredicted RBP15.41■□□□□ 0.06
APOBEC3D-202ENST00000427494 MYH11P35749 1972 aa15.41■□□□□ 0.06
APOBEC3D-202ENST00000427494 ARHGEF35A5YM69 484 aa15.4■□□□□ 0.06
APOBEC3D-202ENST00000427494 ZNF263O14978 683 aa15.4■□□□□ 0.06
APOBEC3D-202ENST00000427494 NOL4O94818 638 aa15.4■□□□□ 0.06
APOBEC3D-202ENST00000427494 RPL13P26373 211 aaKnown RBP15.4■□□□□ 0.06
APOBEC3D-202ENST00000427494 BACE1P56817 501 aa15.4■□□□□ 0.06
APOBEC3D-202ENST00000427494 POLR2FP61218 127 aaKnown RBP15.4■□□□□ 0.06
APOBEC3D-202ENST00000427494 RPS6P62753 249 aaKnown RBP15.4■□□□□ 0.06
APOBEC3D-202ENST00000427494 MRPS9P82933 396 aaKnown RBP15.4■□□□□ 0.06
APOBEC3D-202ENST00000427494 KCNA1Q09470 495 aa15.4■□□□□ 0.06
APOBEC3D-202ENST00000427494 ARHGAP27Q6ZUM4 889 aa15.4■□□□□ 0.06
APOBEC3D-202ENST00000427494 SRGAP1Q7Z6B7 1085 aa15.4■□□□□ 0.06
APOBEC3D-202ENST00000427494 SAMD3Q8N6K7 520 aa15.4■□□□□ 0.06
APOBEC3D-202ENST00000427494 EHBP1Q8NDI1 1231 aa15.4■□□□□ 0.06
APOBEC3D-202ENST00000427494 ATG4CQ96DT6 458 aa15.4■□□□□ 0.06
APOBEC3D-202ENST00000427494 TSGA10Q9BZW7 698 aa15.4■□□□□ 0.06
APOBEC3D-202ENST00000427494 LACRTQ9GZZ8 138 aa15.4■□□□□ 0.06
APOBEC3D-202ENST00000427494 ZSWIM4Q9H7M6 989 aa15.4■□□□□ 0.06
APOBEC3D-202ENST00000427494 JADE2Q9NQC1 790 aa15.4■□□□□ 0.06
APOBEC3D-202ENST00000427494 ZNF112Q9UJU3 913 aa15.4■□□□□ 0.06
APOBEC3D-202ENST00000427494 PNMA2Q9UL42 364 aa15.4■□□□□ 0.06
APOBEC3D-202ENST00000427494 FZD1Q9UP38 647 aa15.4■□□□□ 0.06
APOBEC3D-202ENST00000427494 COL11A1P12107 1806 aaPredicted RBP15.4■□□□□ 0.06
APOBEC3D-202ENST00000427494 PHIPQ8WWQ0 1821 aa15.4■□□□□ 0.06
APOBEC3D-202ENST00000427494 VWA5AO00534 786 aa15.4■□□□□ 0.06
APOBEC3D-202ENST00000427494 CLIC2O15247 247 aa15.4■□□□□ 0.06
APOBEC3D-202ENST00000427494 SLC16A3O15427 465 aaKnown RBP15.4■□□□□ 0.06
APOBEC3D-202ENST00000427494 AKR1B10O60218 316 aa15.4■□□□□ 0.06
APOBEC3D-202ENST00000427494 EPB41P11171 864 aaKnown RBP15.4■□□□□ 0.06
APOBEC3D-202ENST00000427494 PTPRAP18433 802 aa15.4■□□□□ 0.06
APOBEC3D-202ENST00000427494 CHMP4BP1P59074 171 aa15.4■□□□□ 0.06
APOBEC3D-202ENST00000427494 ITGB3BPQ13352 177 aaPredicted RBP15.4■□□□□ 0.06
APOBEC3D-202ENST00000427494 MTMR1Q13613 665 aa15.4■□□□□ 0.06
APOBEC3D-202ENST00000427494 PGM5Q15124 567 aa15.4■□□□□ 0.06
APOBEC3D-202ENST00000427494 ZNF280CQ8ND82 737 aa15.4■□□□□ 0.06
APOBEC3D-202ENST00000427494 NUCKS1Q9H1E3 243 aaKnown RBP15.4■□□□□ 0.06
APOBEC3D-202ENST00000427494 SEL1LQ9UBV2 794 aa15.4■□□□□ 0.06
APOBEC3D-202ENST00000427494 PUF60Q9UHX1 559 aaKnown RBP15.4■□□□□ 0.06
APOBEC3D-202ENST00000427494 ODF2LQ9ULJ1 636 aa15.4■□□□□ 0.06
APOBEC3D-202ENST00000427494 ZMYM2Q9UBW7 1377 aa15.4■□□□□ 0.06
APOBEC3D-202ENST00000427494 SPDYE4A6NLX3 237 aa15.39■□□□□ 0.05
APOBEC3D-202ENST00000427494 DHX15O43143 795 aaKnown RBP15.39■□□□□ 0.05
APOBEC3D-202ENST00000427494 AKAP3O75969 853 aa15.39■□□□□ 0.05
APOBEC3D-202ENST00000427494 AFPP02771 609 aaKnown RBP15.39■□□□□ 0.05
APOBEC3D-202ENST00000427494 FDX1P10109 184 aa15.39■□□□□ 0.05
APOBEC3D-202ENST00000427494 MYCLP12524 364 aaPredicted RBP15.39■□□□□ 0.05
APOBEC3D-202ENST00000427494 ZNF131P52739 623 aa15.39■□□□□ 0.05
APOBEC3D-202ENST00000427494 APBA1Q02410 837 aa15.39■□□□□ 0.05
APOBEC3D-202ENST00000427494 KIF5AQ12840 1032 aa15.39■□□□□ 0.05
APOBEC3D-202ENST00000427494 ZC2HC1CQ53FD0 456 aaPredicted RBP15.39■□□□□ 0.05
APOBEC3D-202ENST00000427494 SFMBT2Q5VUG0 894 aa15.39■□□□□ 0.05
APOBEC3D-202ENST00000427494 NSMFQ6X4W1 530 aa15.39■□□□□ 0.05
APOBEC3D-202ENST00000427494 RNF207Q6ZRF8 634 aa15.39■□□□□ 0.05
APOBEC3D-202ENST00000427494 FAM178BQ8IXR5 827 aa15.39■□□□□ 0.05
APOBEC3D-202ENST00000427494 NLGN2Q8NFZ4 835 aa15.39■□□□□ 0.05
APOBEC3D-202ENST00000427494 TRPM4Q8TD43 1214 aa15.39■□□□□ 0.05
APOBEC3D-202ENST00000427494 WNK4Q96J92 1243 aa15.39■□□□□ 0.05
APOBEC3D-202ENST00000427494 IFIH1Q9BYX4 1025 aaKnown RBP15.39■□□□□ 0.05
APOBEC3D-202ENST00000427494 EPC1Q9H2F5 836 aa15.39■□□□□ 0.05
APOBEC3D-202ENST00000427494 ARGLU1Q9NWB6 273 aaPredicted RBP15.39■□□□□ 0.05
APOBEC3D-202ENST00000427494 MYO6Q9UM54 1294 aa15.39■□□□□ 0.05
APOBEC3D-202ENST00000427494 SAMM50Q9Y512 469 aa15.39■□□□□ 0.05
APOBEC3D-202ENST00000427494 PCDHA13Q9Y5I0 950 aa15.39■□□□□ 0.05
APOBEC3D-202ENST00000427494 TGFB1I1O43294 461 aa15.38■□□□□ 0.05
APOBEC3D-202ENST00000427494 USO1O60763 962 aaKnown RBP15.38■□□□□ 0.05
APOBEC3D-202ENST00000427494 P4HBP07237 508 aaKnown RBP15.38■□□□□ 0.05
APOBEC3D-202ENST00000427494 XRCC5P13010 732 aaKnown RBP15.38■□□□□ 0.05
APOBEC3D-202ENST00000427494 GUCY2CP25092 1073 aa15.38■□□□□ 0.05
APOBEC3D-202ENST00000427494 CLCN6P51797 869 aa15.38■□□□□ 0.05
APOBEC3D-202ENST00000427494 AMPD2Q01433 879 aa15.38■□□□□ 0.05
Retrieved 100 of 20,778 RNA–protein pairs in 20.8 ms