RNA–Protein interactions for RNA: ENST00000424721.5

VPS8-205, Transcript of VPS8, CORVET complex subunit, humanhuman

TSL 3

Gene VPS8, Length 653 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS8-205ENST00000424721 PLCB3Q01970 1234 aa6.28□□□□□ -1.4
VPS8-205ENST00000424721 DSC3Q14574 896 aa6.28□□□□□ -1.4
VPS8-205ENST00000424721 CCDC178Q5BJE1 867 aa6.28□□□□□ -1.4
VPS8-205ENST00000424721 C9orf50Q5SZB4 431 aa6.28□□□□□ -1.4
VPS8-205ENST00000424721 REPS2Q8NFH8 660 aa6.28□□□□□ -1.4
VPS8-205ENST00000424721 OR13H1Q8NG92 308 aa6.28□□□□□ -1.4
VPS8-205ENST00000424721 OSBP2Q969R2 916 aa6.28□□□□□ -1.4
VPS8-205ENST00000424721 TIFAQ96CG3 184 aa6.28□□□□□ -1.4
VPS8-205ENST00000424721 GUCD1Q96NT3 240 aa6.28□□□□□ -1.4
VPS8-205ENST00000424721 FSD1Q9BTV5 496 aa6.28□□□□□ -1.4
VPS8-205ENST00000424721 NIF3L1Q9GZT8 377 aa6.28□□□□□ -1.4
VPS8-205ENST00000424721 MAF1Q9H063 256 aa6.28□□□□□ -1.4
VPS8-205ENST00000424721 ZNF576Q9H609 170 aa6.28□□□□□ -1.4
VPS8-205ENST00000424721 IGFLR1Q9H665 355 aa6.28□□□□□ -1.4
VPS8-205ENST00000424721 ENAMQ9NRM1 1142 aa6.28□□□□□ -1.4
VPS8-205ENST00000424721 IGSF5Q9NSI5 407 aa6.28□□□□□ -1.4
VPS8-205ENST00000424721 PLXNB2O15031 1838 aa6.27□□□□□ -1.41
VPS8-205ENST00000424721 MAST2Q6P0Q8 1798 aa6.27□□□□□ -1.41
VPS8-205ENST00000424721 IGKV6D-41A0A0C4DH26 115 aa6.27□□□□□ -1.41
VPS8-205ENST00000424721 DYNC1LI2O43237 492 aaPredicted RBP6.27□□□□□ -1.41
VPS8-205ENST00000424721 SMARCA5O60264 1052 aaPredicted RBP6.27□□□□□ -1.41
VPS8-205ENST00000424721 RANBP6O60518 1105 aaKnown RBP6.27□□□□□ -1.41
VPS8-205ENST00000424721 MMP20O60882 483 aa6.27□□□□□ -1.41
VPS8-205ENST00000424721 CPNE3O75131 537 aaKnown RBP6.27□□□□□ -1.41
VPS8-205ENST00000424721 PCP11498 1178 aaKnown RBP6.27□□□□□ -1.41
VPS8-205ENST00000424721 ACTN1P12814 892 aa6.27□□□□□ -1.41
VPS8-205ENST00000424721 ALAS1P13196 640 aa6.27□□□□□ -1.41
VPS8-205ENST00000424721 HOXD8P13378 290 aaPredicted RBP6.27□□□□□ -1.41
VPS8-205ENST00000424721 MCCP23508 829 aa6.27□□□□□ -1.41
VPS8-205ENST00000424721 NKX3-2P78367 333 aa6.27□□□□□ -1.41
VPS8-205ENST00000424721 PPARAQ07869 468 aa6.27□□□□□ -1.41
VPS8-205ENST00000424721 TBC1D8BQ0IIM8 1120 aa6.27□□□□□ -1.41
VPS8-205ENST00000424721 AAK1Q2M2I8 961 aa6.27□□□□□ -1.41
VPS8-205ENST00000424721 AKNAD1Q5T1N1 836 aa6.27□□□□□ -1.41
VPS8-205ENST00000424721 ARMCX2Q7L311 632 aa6.27□□□□□ -1.41
VPS8-205ENST00000424721 DHX32Q7L7V1 743 aaKnown RBP6.27□□□□□ -1.41
VPS8-205ENST00000424721 CLEC10AQ8IUN9 316 aa6.27□□□□□ -1.41
VPS8-205ENST00000424721 CCDC144CPQ8IYA2 1237 aa6.27□□□□□ -1.41
VPS8-205ENST00000424721 DCAF4Q8WV16 495 aa6.27□□□□□ -1.41
VPS8-205ENST00000424721 ATXN2LQ8WWM7 1075 aaKnown RBP6.27□□□□□ -1.41
VPS8-205ENST00000424721 MYLIPQ8WY64 445 aa6.27□□□□□ -1.41
VPS8-205ENST00000424721 TNFRSF25Q93038 417 aa6.27□□□□□ -1.41
VPS8-205ENST00000424721 CEP95Q96GE4 821 aa6.27□□□□□ -1.41
VPS8-205ENST00000424721 TTC14Q96N46 770 aa6.27□□□□□ -1.41
VPS8-205ENST00000424721 NUP88Q99567 741 aaPredicted RBP6.27□□□□□ -1.41
VPS8-205ENST00000424721 UPF3AQ9H1J1 476 aaKnown RBP6.27□□□□□ -1.41
VPS8-205ENST00000424721 SLC28A3Q9HAS3 691 aa6.27□□□□□ -1.41
VPS8-205ENST00000424721 VTA1Q9NP79 307 aa6.27□□□□□ -1.41
VPS8-205ENST00000424721 IL23AQ9NPF7 189 aa6.27□□□□□ -1.41
VPS8-205ENST00000424721 HELLSQ9NRZ9 838 aa6.27□□□□□ -1.41
VPS8-205ENST00000424721 ZFATQ9P243 1243 aa6.27□□□□□ -1.41
VPS8-205ENST00000424721 STK17AQ9UEE5 414 aa6.27□□□□□ -1.41
VPS8-205ENST00000424721 FOXD3Q9UJU5 478 aaPredicted RBP6.27□□□□□ -1.41
VPS8-205ENST00000424721 STX8Q9UNK0 236 aa6.27□□□□□ -1.41
VPS8-205ENST00000424721 RIPK3Q9Y572 518 aa6.27□□□□□ -1.41
VPS8-205ENST00000424721 ROBO3Q96MS0 1386 aa6.27□□□□□ -1.41
VPS8-205ENST00000424721 BRCA2P51587 3418 aa6.27□□□□□ -1.41
VPS8-205ENST00000424721 RAD50Q92878 1312 aa6.26□□□□□ -1.41
VPS8-205ENST00000424721 SYNRGQ9UMZ2 1314 aa6.26□□□□□ -1.41
VPS8-205ENST00000424721 PNMA6FA0A0J9YX94 578 aa6.26□□□□□ -1.41
VPS8-205ENST00000424721 FAM181BA6NEQ2 426 aa6.26□□□□□ -1.41
VPS8-205ENST00000424721 KIF28PB7ZC32 967 aa6.26□□□□□ -1.41
VPS8-205ENST00000424721 NKRFO15226 690 aaKnown RBP eCLIP6.26□□□□□ -1.41
VPS8-205ENST00000424721 PRDM1O75626 825 aa6.26□□□□□ -1.41
VPS8-205ENST00000424721 P4HBP07237 508 aaKnown RBP6.26□□□□□ -1.41
VPS8-205ENST00000424721 PFKMP08237 780 aa6.26□□□□□ -1.41
VPS8-205ENST00000424721 AMPD1P23109 780 aa6.26□□□□□ -1.41
VPS8-205ENST00000424721 CES1P23141 567 aa6.26□□□□□ -1.41
VPS8-205ENST00000424721 CPT1AP50416 773 aa6.26□□□□□ -1.41
VPS8-205ENST00000424721 NRLP54845 237 aa6.26□□□□□ -1.41
VPS8-205ENST00000424721 GPLD1P80108 840 aa6.26□□□□□ -1.41
VPS8-205ENST00000424721 ORC1Q13415 861 aa6.26□□□□□ -1.41
VPS8-205ENST00000424721 ITGA7Q13683 1181 aa6.26□□□□□ -1.41
VPS8-205ENST00000424721 ALX1Q15699 326 aa6.26□□□□□ -1.41
VPS8-205ENST00000424721 FSCN1Q16658 493 aaKnown RBP6.26□□□□□ -1.41
VPS8-205ENST00000424721 TMEM240Q5SV17 173 aa6.26□□□□□ -1.41
VPS8-205ENST00000424721 CCSAPQ6IQ19 270 aaPredicted RBP6.26□□□□□ -1.41
VPS8-205ENST00000424721 KIAA1211Q6ZU35 1233 aa6.26□□□□□ -1.41
VPS8-205ENST00000424721 FAM133AQ8N9E0 248 aa6.26□□□□□ -1.41
VPS8-205ENST00000424721 FBF1Q8TES7 1133 aa6.26□□□□□ -1.41
VPS8-205ENST00000424721 HERVK_113Q902F9 699 aa6.26□□□□□ -1.41
VPS8-205ENST00000424721 EVI5LQ96CN4 794 aa6.26□□□□□ -1.41
VPS8-205ENST00000424721 MRRFQ96E11 262 aaKnown RBP6.26□□□□□ -1.41
VPS8-205ENST00000424721 RBSNQ9H1K0 784 aa6.26□□□□□ -1.41
VPS8-205ENST00000424721 TOMM22Q9NS69 142 aa6.26□□□□□ -1.41
VPS8-205ENST00000424721 HOMER2Q9NSB8 354 aa6.26□□□□□ -1.41
VPS8-205ENST00000424721 RNF146Q9NTX7 359 aa6.26□□□□□ -1.41
VPS8-205ENST00000424721 CCPG1Q9ULG6 757 aa6.26□□□□□ -1.41
VPS8-205ENST00000424721 SLC4A7Q9Y6M7 1214 aa6.26□□□□□ -1.41
VPS8-205ENST00000424721 FOCADQ5VW36 1801 aa6.26□□□□□ -1.41
VPS8-205ENST00000424721 SIPA1L1O43166 1804 aa6.25□□□□□ -1.41
VPS8-205ENST00000424721 ELOA3CA0A087WX78 387 aaPredicted RBP6.25□□□□□ -1.41
VPS8-205ENST00000424721 ELOA3DA6NLF2 546 aaPredicted RBP6.25□□□□□ -1.41
VPS8-205ENST00000424721 ADARB2-AS1A8MUL3 147 aa6.25□□□□□ -1.41
VPS8-205ENST00000424721 EIF1AYO14602 144 aaKnown RBP6.25□□□□□ -1.41
VPS8-205ENST00000424721 PARNO95453 639 aaKnown RBP6.25□□□□□ -1.41
VPS8-205ENST00000424721 ICAM1P05362 532 aa6.25□□□□□ -1.41
VPS8-205ENST00000424721 TOP1P11387 765 aaKnown RBP6.25□□□□□ -1.41
VPS8-205ENST00000424721 EDN3P14138 238 aa6.25□□□□□ -1.41
VPS8-205ENST00000424721 CSF2RAP15509 400 aa6.25□□□□□ -1.41
Retrieved 100 of 20,778 RNA–protein pairs in 18.5 ms