RNA–Protein interactions for RNA: ENST00000414978.5

MCF2-204, Transcript of MCF.2 cell line derived transforming sequence, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene MCF2, Length 3,813 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MCF2-204ENST00000414978 GOLGA8BA8MQT2 603 aa3.11□□□□□ -1.91
MCF2-204ENST00000414978 AOC2O75106 756 aa3.11□□□□□ -1.91
MCF2-204ENST00000414978 ZNF445P59923 1031 aa3.11□□□□□ -1.91
MCF2-204ENST00000414978 ST5P78524 1137 aa3.11□□□□□ -1.91
MCF2-204ENST00000414978 AP3B2Q13367 1082 aa3.11□□□□□ -1.91
MCF2-204ENST00000414978 ALDH1L2Q3SY69 923 aa3.11□□□□□ -1.91
MCF2-204ENST00000414978 BBS9Q3SYG4 887 aa3.11□□□□□ -1.91
MCF2-204ENST00000414978 WDR44Q5JSH3 913 aa3.11□□□□□ -1.91
MCF2-204ENST00000414978 C11orf74Q86VG3 221 aa3.11□□□□□ -1.91
MCF2-204ENST00000414978 JAM3Q9BX67 310 aa3.11□□□□□ -1.91
MCF2-204ENST00000414978 ALDH8A1Q9H2A2 487 aaPredicted RBP3.11□□□□□ -1.91
MCF2-204ENST00000414978 ARMT1Q9H993 441 aa3.11□□□□□ -1.91
MCF2-204ENST00000414978 ATXN7L1Q9ULK2 861 aaPredicted RBP3.11□□□□□ -1.91
MCF2-204ENST00000414978 CORO2BQ9UQ03 480 aa3.11□□□□□ -1.91
MCF2-204ENST00000414978 MRFAP1Q9Y605 127 aa3.11□□□□□ -1.91
MCF2-204ENST00000414978 EP400Q96L91 3159 aa3.11□□□□□ -1.91
MCF2-204ENST00000414978 INSRP06213 1382 aa3.11□□□□□ -1.91
MCF2-204ENST00000414978 CBX7O95931 251 aa3.11□□□□□ -1.91
MCF2-204ENST00000414978 PTX3P26022 381 aaPredicted RBP3.11□□□□□ -1.91
MCF2-204ENST00000414978 POLD1P28340 1107 aa3.11□□□□□ -1.91
MCF2-204ENST00000414978 HOXC13P31276 330 aa3.11□□□□□ -1.91
MCF2-204ENST00000414978 FLT3P36888 993 aa3.11□□□□□ -1.91
MCF2-204ENST00000414978 EIF5P55010 431 aaKnown RBP3.11□□□□□ -1.91
MCF2-204ENST00000414978 POU5F1Q01860 360 aaKnown RBP3.11□□□□□ -1.91
MCF2-204ENST00000414978 SAFBQ15424 915 aaKnown RBP eCLIP3.11□□□□□ -1.91
MCF2-204ENST00000414978 TXNRD1Q16881 649 aa3.11□□□□□ -1.91
MCF2-204ENST00000414978 RPS26P11Q5JNZ5 115 aaPredicted RBP3.11□□□□□ -1.91
MCF2-204ENST00000414978 HYIQ5T013 277 aa3.11□□□□□ -1.91
MCF2-204ENST00000414978 FCHSD1Q86WN1 690 aa3.11□□□□□ -1.91
MCF2-204ENST00000414978 TAB3Q8N5C8 712 aaPredicted RBP3.11□□□□□ -1.91
MCF2-204ENST00000414978 CCT6BQ92526 530 aa3.11□□□□□ -1.91
MCF2-204ENST00000414978 PTPRN2Q92932 1015 aa3.11□□□□□ -1.91
MCF2-204ENST00000414978 TBCBQ99426 244 aa3.11□□□□□ -1.91
MCF2-204ENST00000414978 ANO3Q9BYT9 981 aa3.11□□□□□ -1.91
MCF2-204ENST00000414978 GP6Q9HCN6 339 aa3.11□□□□□ -1.91
MCF2-204ENST00000414978 TMEFF2Q9UIK5 374 aaPredicted RBP3.11□□□□□ -1.91
MCF2-204ENST00000414978 ZNF281Q9Y2X9 895 aa3.11□□□□□ -1.91
MCF2-204ENST00000414978 KPNA5O15131 536 aa3.1□□□□□ -1.91
MCF2-204ENST00000414978 BRINP1O60477 761 aa3.1□□□□□ -1.91
MCF2-204ENST00000414978 CTNND1O60716 968 aaKnown RBP3.1□□□□□ -1.91
MCF2-204ENST00000414978 ASGR2P07307 311 aa3.1□□□□□ -1.91
MCF2-204ENST00000414978 COL6A2P12110 1019 aa3.1□□□□□ -1.91
MCF2-204ENST00000414978 ITGA4P13612 1032 aa3.1□□□□□ -1.91
MCF2-204ENST00000414978 MAPK9P45984 424 aa3.1□□□□□ -1.91
MCF2-204ENST00000414978 CDK5R2Q13319 367 aa3.1□□□□□ -1.91
MCF2-204ENST00000414978 LAPTM5Q13571 262 aa3.1□□□□□ -1.91
MCF2-204ENST00000414978 DHCR24Q15392 516 aa3.1□□□□□ -1.91
MCF2-204ENST00000414978 ZRSR2Q15696 482 aaKnown RBP3.1□□□□□ -1.91
MCF2-204ENST00000414978 GPR162Q16538 588 aa3.1□□□□□ -1.91
MCF2-204ENST00000414978 DUOXA2Q1HG44 320 aa3.1□□□□□ -1.91
MCF2-204ENST00000414978 KIAA0753Q2KHM9 967 aa3.1□□□□□ -1.91
MCF2-204ENST00000414978 NBPF9Q3BBW0 867 aa3.1□□□□□ -1.91
MCF2-204ENST00000414978 FNDC3BQ53EP0 1204 aaKnown RBP3.1□□□□□ -1.91
MCF2-204ENST00000414978 ZC3H12AQ5D1E8 599 aaKnown RBP3.1□□□□□ -1.91
MCF2-204ENST00000414978 NBPF12Q5TAG4 269 aaPredicted RBP3.1□□□□□ -1.91
MCF2-204ENST00000414978 ZNF468Q5VIY5 522 aaPredicted RBP3.1□□□□□ -1.91
MCF2-204ENST00000414978 CDCP2Q5VXM1 449 aa3.1□□□□□ -1.91
MCF2-204ENST00000414978 PPP1R35Q8TAP8 253 aa3.1□□□□□ -1.91
MCF2-204ENST00000414978 ACO2Q99798 780 aaKnown RBP3.1□□□□□ -1.91
MCF2-204ENST00000414978 CABP5Q9NP86 173 aa3.1□□□□□ -1.91
MCF2-204ENST00000414978 CYP26B1Q9NR63 512 aa3.1□□□□□ -1.91
MCF2-204ENST00000414978 C9orf78Q9NZ63 289 aaPredicted RBP3.1□□□□□ -1.91
MCF2-204ENST00000414978 PCDHA11Q9Y5I1 949 aa3.1□□□□□ -1.91
MCF2-204ENST00000414978 PLEKHH1Q9ULM0 1364 aa3.1□□□□□ -1.91
MCF2-204ENST00000414978 CPSF1Q10570 1443 aaKnown RBP3.1□□□□□ -1.91
MCF2-204ENST00000414978 A6NCN8 305 aa3.1□□□□□ -1.91
MCF2-204ENST00000414978 SHOXO15266 292 aa3.1□□□□□ -1.91
MCF2-204ENST00000414978 LILRB5O75023 590 aa3.1□□□□□ -1.91
MCF2-204ENST00000414978 WISP1O95388 367 aa3.1□□□□□ -1.91
MCF2-204ENST00000414978 IL6STP40189 918 aaPredicted RBP3.1□□□□□ -1.91
MCF2-204ENST00000414978 AMPD2Q01433 879 aa3.1□□□□□ -1.91
MCF2-204ENST00000414978 ELF2Q15723 593 aa3.1□□□□□ -1.91
MCF2-204ENST00000414978 MZT2AQ6P582 158 aa3.1□□□□□ -1.91
MCF2-204ENST00000414978 ARMCX6Q7L4S7 300 aa3.1□□□□□ -1.91
MCF2-204ENST00000414978 WFDC8Q8IUA0 241 aa3.1□□□□□ -1.91
MCF2-204ENST00000414978 ZBTB34Q8NCN2 500 aa3.1□□□□□ -1.91
MCF2-204ENST00000414978 RRP7BPQ9NSQ0 103 aa3.1□□□□□ -1.91
MCF2-204ENST00000414978 RTEL1Q9NZ71 1219 aa3.1□□□□□ -1.91
MCF2-204ENST00000414978 PPIP5K1Q6PFW1 1433 aa3.1□□□□□ -1.91
MCF2-204ENST00000414978 WASHC2AQ641Q2 1341 aa3.1□□□□□ -1.91
MCF2-204ENST00000414978 PNPLA7Q6ZV29 1317 aa3.1□□□□□ -1.91
MCF2-204ENST00000414978 WASH4PA8MWX3 477 aa3.1□□□□□ -1.91
MCF2-204ENST00000414978 DYNC1LI2O43237 492 aaPredicted RBP3.1□□□□□ -1.91
MCF2-204ENST00000414978 FBXO21O94952 628 aa3.1□□□□□ -1.91
MCF2-204ENST00000414978 ALX3O95076 343 aa3.1□□□□□ -1.91
MCF2-204ENST00000414978 THBDP07204 575 aa3.1□□□□□ -1.91
MCF2-204ENST00000414978 ASPAP45381 313 aa3.1□□□□□ -1.91
MCF2-204ENST00000414978 GABREP78334 506 aa3.1□□□□□ -1.91
MCF2-204ENST00000414978 ZBED6P86452 979 aa3.1□□□□□ -1.91
MCF2-204ENST00000414978 TMEM240Q5SV17 173 aa3.1□□□□□ -1.91
MCF2-204ENST00000414978 NUTM2GQ5VZR2 741 aa3.1□□□□□ -1.91
MCF2-204ENST00000414978 POMZP3Q6PJE2 187 aa3.1□□□□□ -1.91
MCF2-204ENST00000414978 DDX53Q86TM3 631 aaKnown RBP3.1□□□□□ -1.91
MCF2-204ENST00000414978 MCATQ8IVS2 390 aaKnown RBP3.1□□□□□ -1.91
MCF2-204ENST00000414978 POF1BQ8WVV4 589 aa3.1□□□□□ -1.91
MCF2-204ENST00000414978 ISL2Q96A47 359 aa3.1□□□□□ -1.91
MCF2-204ENST00000414978 TBC1D20Q96BZ9 403 aa3.1□□□□□ -1.91
MCF2-204ENST00000414978 HSPBAP1Q96EW2 488 aa3.1□□□□□ -1.91
MCF2-204ENST00000414978 WNT10AQ9GZT5 417 aa3.1□□□□□ -1.91
MCF2-204ENST00000414978 FAM105AQ9NUU6 356 aa3.1□□□□□ -1.91
Retrieved 100 of 20,778 RNA–protein pairs in 77.7 ms