RNA–Protein interactions for RNA: ENST00000413911.1

AC005540.1-201, humanhuman

TSL 3 BASIC

Gene AC005540.1, Length 919 nt, Biotype antisense RNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AC005540.1-201ENST00000413911 LMAN2LQ9H0V9 348 aa27.83■■■□□ 2.05
AC005540.1-201ENST00000413911 ALG13Q9NP73 1137 aaKnown RBP27.83■■■□□ 2.05
AC005540.1-201ENST00000413911 RBM28Q9NW13 759 aaKnown RBP27.83■■■□□ 2.05
AC005540.1-201ENST00000413911 RWDD3Q9Y3V2 267 aa27.83■■■□□ 2.05
AC005540.1-201ENST00000413911 SQORQ9Y6N5 450 aa27.83■■■□□ 2.05
AC005540.1-201ENST00000413911 LOXHD1Q8IVV2 1947 aa27.82■■■□□ 2.04
AC005540.1-201ENST00000413911 ADAMTS3O15072 1205 aa27.82■■■□□ 2.04
AC005540.1-201ENST00000413911 CDC27P30260 824 aa27.82■■■□□ 2.04
AC005540.1-201ENST00000413911 CLK2P49760 499 aaKnown RBP27.82■■■□□ 2.04
AC005540.1-201ENST00000413911 ADCY7P51828 1080 aa27.82■■■□□ 2.04
AC005540.1-201ENST00000413911 RTN1Q16799 776 aa27.82■■■□□ 2.04
AC005540.1-201ENST00000413911 PPP1R18Q6NYC8 613 aa27.82■■■□□ 2.04
AC005540.1-201ENST00000413911 TMX1Q9H3N1 280 aa27.82■■■□□ 2.04
AC005540.1-201ENST00000413911 HCN4Q9Y3Q4 1203 aa27.82■■■□□ 2.04
AC005540.1-201ENST00000413911 IGSF9BQ9UPX0 1349 aa27.82■■■□□ 2.04
AC005540.1-201ENST00000413911 IGKV6D-21A0A0A0MT36 114 aa27.81■■■□□ 2.04
AC005540.1-201ENST00000413911 SMCO2A6NFE2 343 aa27.81■■■□□ 2.04
AC005540.1-201ENST00000413911 ZBTB43O43298 467 aa27.81■■■□□ 2.04
AC005540.1-201ENST00000413911 DNAJB1P25685 340 aa27.81■■■□□ 2.04
AC005540.1-201ENST00000413911 SREBF1P36956 1147 aa27.81■■■□□ 2.04
AC005540.1-201ENST00000413911 GATMP50440 423 aa27.81■■■□□ 2.04
AC005540.1-201ENST00000413911 ZP2Q05996 745 aa27.81■■■□□ 2.04
AC005540.1-201ENST00000413911 MTHFD1LQ6UB35 978 aa27.81■■■□□ 2.04
AC005540.1-201ENST00000413911 DHX32Q7L7V1 743 aaKnown RBP27.81■■■□□ 2.04
AC005540.1-201ENST00000413911 CELF4Q9BZC1 486 aaKnown RBP27.81■■■□□ 2.04
AC005540.1-201ENST00000413911 BARHL2Q9NY43 387 aa27.81■■■□□ 2.04
AC005540.1-201ENST00000413911 PLAGL2Q9UPG8 496 aa27.81■■■□□ 2.04
AC005540.1-201ENST00000413911 ARIH1Q9Y4X5 557 aaPredicted RBP27.81■■■□□ 2.04
AC005540.1-201ENST00000413911 DDX39AO00148 427 aaKnown RBP27.8■■■□□ 2.04
AC005540.1-201ENST00000413911 FOSP01100 380 aaPredicted RBP27.8■■■□□ 2.04
AC005540.1-201ENST00000413911 MMP1P03956 469 aa27.8■■■□□ 2.04
AC005540.1-201ENST00000413911 CLUL1Q15846 466 aa27.8■■■□□ 2.04
AC005540.1-201ENST00000413911 TMEM266Q2M3C6 531 aa27.8■■■□□ 2.04
AC005540.1-201ENST00000413911 BMP2KLQ5H9B9 411 aa27.8■■■□□ 2.04
AC005540.1-201ENST00000413911 CDHR5Q9HBB8 845 aa27.8■■■□□ 2.04
AC005540.1-201ENST00000413911 KIAA1671Q9BY89 1806 aa27.8■■■□□ 2.04
AC005540.1-201ENST00000413911 KDM3AQ9Y4C1 1321 aa27.79■■■□□ 2.04
AC005540.1-201ENST00000413911 SMIM35A0A1B0GVV1 85 aa27.79■■■□□ 2.04
AC005540.1-201ENST00000413911 C19orf67A6NJJ6 358 aa27.79■■■□□ 2.04
AC005540.1-201ENST00000413911 FAM86B1E9PN63 330 aa27.79■■■□□ 2.04
AC005540.1-201ENST00000413911 LINC01565O15544 149 aa27.79■■■□□ 2.04
AC005540.1-201ENST00000413911 RPLP2P05387 115 aaKnown RBP27.79■■■□□ 2.04
AC005540.1-201ENST00000413911 FAM86B2P0C5J1 330 aa27.79■■■□□ 2.04
AC005540.1-201ENST00000413911 RNF20Q5VTR2 975 aa27.79■■■□□ 2.04
AC005540.1-201ENST00000413911 ABHD15Q6UXT9 468 aa27.79■■■□□ 2.04
AC005540.1-201ENST00000413911 NPAS4Q8IUM7 802 aa27.79■■■□□ 2.04
AC005540.1-201ENST00000413911 UIMC1Q96RL1 719 aa27.79■■■□□ 2.04
AC005540.1-201ENST00000413911 PLVAPQ9BX97 442 aa27.79■■■□□ 2.04
AC005540.1-201ENST00000413911 FTHL17Q9BXU8 183 aa27.79■■■□□ 2.04
AC005540.1-201ENST00000413911 DHX15O43143 795 aaKnown RBP27.78■■■□□ 2.04
AC005540.1-201ENST00000413911 TBX10O75333 385 aa27.78■■■□□ 2.04
AC005540.1-201ENST00000413911 ITGB1P05556 798 aa27.78■■■□□ 2.04
AC005540.1-201ENST00000413911 PAK2Q13177 524 aa27.78■■■□□ 2.04
AC005540.1-201ENST00000413911 TSGA10IPQ3SY00 556 aa27.78■■■□□ 2.04
AC005540.1-201ENST00000413911 PAN2Q504Q3 1202 aaKnown RBP27.78■■■□□ 2.04
AC005540.1-201ENST00000413911 TEX2Q8IWB9 1127 aa27.78■■■□□ 2.04
AC005540.1-201ENST00000413911 CMTR2Q8IYT2 770 aaKnown RBP27.78■■■□□ 2.04
AC005540.1-201ENST00000413911 CRYGNQ8WXF5 182 aa27.78■■■□□ 2.04
AC005540.1-201ENST00000413911 IGFLR1Q9H665 355 aa27.78■■■□□ 2.04
AC005540.1-201ENST00000413911 KLF18A0A0U1RQI7 1052 aa27.77■■■□□ 2.04
AC005540.1-201ENST00000413911 GOLGA8AA7E2F4 631 aa27.77■■■□□ 2.04
AC005540.1-201ENST00000413911 GOLGA8BA8MQT2 603 aa27.77■■■□□ 2.04
AC005540.1-201ENST00000413911 NCK2O43639 380 aa27.77■■■□□ 2.04
AC005540.1-201ENST00000413911 KLRC1P26715 233 aa27.77■■■□□ 2.04
AC005540.1-201ENST00000413911 HOXD11P31277 338 aaPredicted RBP27.77■■■□□ 2.04
AC005540.1-201ENST00000413911 KRT76Q01546 638 aa27.77■■■□□ 2.04
AC005540.1-201ENST00000413911 AP3B2Q13367 1082 aa27.77■■■□□ 2.04
AC005540.1-201ENST00000413911 JAKMIP3Q5VZ66 844 aa27.77■■■□□ 2.04
AC005540.1-201ENST00000413911 CCDC60Q8IWA6 550 aaPredicted RBP27.77■■■□□ 2.04
AC005540.1-201ENST00000413911 SPPL3Q8TCT6 385 aa27.77■■■□□ 2.04
AC005540.1-201ENST00000413911 TRIOO75962 3097 aa27.77■■■□□ 2.04
AC005540.1-201ENST00000413911 IGLV3-22A0A075B6J6 115 aa27.76■■■□□ 2.03
AC005540.1-201ENST00000413911 PRR33A8MZF0 331 aa27.76■■■□□ 2.03
AC005540.1-201ENST00000413911 ZBTB42B2RXF5 422 aa27.76■■■□□ 2.03
AC005540.1-201ENST00000413911 M0QZ92 97 aa27.76■■■□□ 2.03
AC005540.1-201ENST00000413911 MGEA5O60502 916 aa27.76■■■□□ 2.03
AC005540.1-201ENST00000413911 SCG2P13521 617 aa27.76■■■□□ 2.03
AC005540.1-201ENST00000413911 ATP4AP20648 1035 aa27.76■■■□□ 2.03
AC005540.1-201ENST00000413911 IRS1P35568 1242 aa27.76■■■□□ 2.03
AC005540.1-201ENST00000413911 ADGRD2Q7Z7M1 963 aa27.76■■■□□ 2.03
AC005540.1-201ENST00000413911 ADHFE1Q8IWW8 467 aa27.76■■■□□ 2.03
AC005540.1-201ENST00000413911 KIAA0319LQ8IZA0 1049 aa27.76■■■□□ 2.03
AC005540.1-201ENST00000413911 NME8Q8N427 588 aa27.76■■■□□ 2.03
AC005540.1-201ENST00000413911 KLHL23Q8NBE8 558 aa27.76■■■□□ 2.03
AC005540.1-201ENST00000413911 TMEM40Q8WWA1 233 aa27.76■■■□□ 2.03
AC005540.1-201ENST00000413911 TNPO1Q92973 898 aaKnown RBP27.76■■■□□ 2.03
AC005540.1-201ENST00000413911 P2RX5Q93086 422 aa27.76■■■□□ 2.03
AC005540.1-201ENST00000413911 PRKAG3Q9UGI9 489 aa27.76■■■□□ 2.03
AC005540.1-201ENST00000413911 NOC2LQ9Y3T9 749 aaKnown RBP27.76■■■□□ 2.03
AC005540.1-201ENST00000413911 hCG_1984214I3L0E3 225 aa27.75■■■□□ 2.03
AC005540.1-201ENST00000413911 MBTPS2O43462 519 aa27.75■■■□□ 2.03
AC005540.1-201ENST00000413911 ALADP13716 330 aa27.75■■■□□ 2.03
AC005540.1-201ENST00000413911 CPA1P15085 419 aa27.75■■■□□ 2.03
AC005540.1-201ENST00000413911 ADD1P35611 737 aaKnown RBP27.75■■■□□ 2.03
AC005540.1-201ENST00000413911 SMAD2Q15796 467 aaKnown RBP27.75■■■□□ 2.03
AC005540.1-201ENST00000413911 NIPA1Q7RTP0 329 aa27.75■■■□□ 2.03
AC005540.1-201ENST00000413911 ZNF713Q8N859 430 aaPredicted RBP27.75■■■□□ 2.03
AC005540.1-201ENST00000413911 ATP8B4Q8TF62 1192 aa27.75■■■□□ 2.03
AC005540.1-201ENST00000413911 ERVK-5Q9HDB9 667 aa27.75■■■□□ 2.03
AC005540.1-201ENST00000413911 BACH1O14867 736 aa27.74■■■□□ 2.03
Retrieved 100 of 20,778 RNA–protein pairs in 26 ms