RNA–Protein interactions for RNA: ENST00000413578.5

LIMS2-210, Transcript of LIM zinc finger domain containing 2, humanhuman

TSL 3

Gene LIMS2, Length 930 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMS2-210ENST00000413578 IGFLR1Q9H665 355 aa13.94□□□□□ -0.18
LIMS2-210ENST00000413578 KCNH7Q9NS40 1196 aa13.94□□□□□ -0.18
LIMS2-210ENST00000413578 SLC9A2Q9UBY0 812 aa13.94□□□□□ -0.18
LIMS2-210ENST00000413578 PCDHA6Q9UN73 950 aa13.94□□□□□ -0.18
LIMS2-210ENST00000413578 PCDHA8Q9Y5H6 950 aa13.94□□□□□ -0.18
LIMS2-210ENST00000413578 PCDHA2Q9Y5H9 948 aa13.94□□□□□ -0.18
LIMS2-210ENST00000413578 NFASCO94856 1347 aa13.93□□□□□ -0.18
LIMS2-210ENST00000413578 SMIM35A0A1B0GVV1 85 aa13.93□□□□□ -0.18
LIMS2-210ENST00000413578 hCG_1642624A0A1W2PR95 340 aa13.93□□□□□ -0.18
LIMS2-210ENST00000413578 LOC730098B7Z3J9 87 aa13.93□□□□□ -0.18
LIMS2-210ENST00000413578 CSPG5O95196 566 aa13.93□□□□□ -0.18
LIMS2-210ENST00000413578 ATG7O95352 703 aa13.93□□□□□ -0.18
LIMS2-210ENST00000413578 SCG2P13521 617 aa13.93□□□□□ -0.18
LIMS2-210ENST00000413578 GATMP50440 423 aa13.93□□□□□ -0.18
LIMS2-210ENST00000413578 CASC1Q6TDU7 716 aa13.93□□□□□ -0.18
LIMS2-210ENST00000413578 FAM43BQ6ZT52 329 aaPredicted RBP13.93□□□□□ -0.18
LIMS2-210ENST00000413578 TMTC3Q6ZXV5 915 aa13.93□□□□□ -0.18
LIMS2-210ENST00000413578 TMTC2Q8N394 836 aa13.93□□□□□ -0.18
LIMS2-210ENST00000413578 CYP2W1Q8TAV3 490 aa13.93□□□□□ -0.18
LIMS2-210ENST00000413578 TRAPPC12Q8WVT3 735 aa13.93□□□□□ -0.18
LIMS2-210ENST00000413578 TMEM87BQ96K49 555 aa13.93□□□□□ -0.18
LIMS2-210ENST00000413578 MFSD14AQ96MC6 490 aa13.93□□□□□ -0.18
LIMS2-210ENST00000413578 MXRA8Q9BRK3 442 aa13.93□□□□□ -0.18
LIMS2-210ENST00000413578 CELF4Q9BZC1 486 aaKnown RBP13.93□□□□□ -0.18
LIMS2-210ENST00000413578 IGKV6D-21A0A0A0MT36 114 aa13.92□□□□□ -0.18
LIMS2-210ENST00000413578 SPDYE3A6NKU9 549 aa13.92□□□□□ -0.18
LIMS2-210ENST00000413578 STAG3L1P0CL83 205 aa13.92□□□□□ -0.18
LIMS2-210ENST00000413578 NDUFV1P49821 464 aa13.92□□□□□ -0.18
LIMS2-210ENST00000413578 ACTR2P61160 394 aa13.92□□□□□ -0.18
LIMS2-210ENST00000413578 PAK2Q13177 524 aa13.92□□□□□ -0.18
LIMS2-210ENST00000413578 ITGB3BPQ13352 177 aaPredicted RBP13.92□□□□□ -0.18
LIMS2-210ENST00000413578 TYW1BQ6NUM6 668 aa13.92□□□□□ -0.18
LIMS2-210ENST00000413578 TEX2Q8IWB9 1127 aa13.92□□□□□ -0.18
LIMS2-210ENST00000413578 NME8Q8N427 588 aa13.92□□□□□ -0.18
LIMS2-210ENST00000413578 PPP2R3CQ969Q6 453 aa13.92□□□□□ -0.18
LIMS2-210ENST00000413578 LSG1Q9H089 658 aaKnown RBP13.92□□□□□ -0.18
LIMS2-210ENST00000413578 TRPC6Q9Y210 931 aa13.92□□□□□ -0.18
LIMS2-210ENST00000413578 PCDHGC5Q9Y5F6 944 aa13.92□□□□□ -0.18
LIMS2-210ENST00000413578 CCDC69A6NI79 296 aa13.91□□□□□ -0.18
LIMS2-210ENST00000413578 MGEA5O60502 916 aa13.91□□□□□ -0.18
LIMS2-210ENST00000413578 CALM1P0DP23 149 aa13.91□□□□□ -0.18
LIMS2-210ENST00000413578 CALM2P0DP24 149 aa13.91□□□□□ -0.18
LIMS2-210ENST00000413578 CALM3P0DP25 149 aa13.91□□□□□ -0.18
LIMS2-210ENST00000413578 ARP10275 920 aa13.91□□□□□ -0.18
LIMS2-210ENST00000413578 MCM5P33992 734 aa13.91□□□□□ -0.18
LIMS2-210ENST00000413578 NRIP1P48552 1158 aa13.91□□□□□ -0.18
LIMS2-210ENST00000413578 SARSP49591 514 aaKnown RBP13.91□□□□□ -0.18
LIMS2-210ENST00000413578 STAT5BP51692 787 aa13.91□□□□□ -0.18
LIMS2-210ENST00000413578 TMEM62Q0P6H9 643 aa13.91□□□□□ -0.18
LIMS2-210ENST00000413578 FUT2Q10981 343 aa13.91□□□□□ -0.18
LIMS2-210ENST00000413578 PAN2Q504Q3 1202 aaKnown RBP13.91□□□□□ -0.18
LIMS2-210ENST00000413578 WWC2Q6AWC2 1192 aa13.91□□□□□ -0.18
LIMS2-210ENST00000413578 MTHFD1LQ6UB35 978 aa13.91□□□□□ -0.18
LIMS2-210ENST00000413578 TRIM67Q6ZTA4 783 aa13.91□□□□□ -0.18
LIMS2-210ENST00000413578 SGMS1Q86VZ5 419 aa13.91□□□□□ -0.18
LIMS2-210ENST00000413578 PRSS33Q8NF86 280 aa13.91□□□□□ -0.18
LIMS2-210ENST00000413578 ATP8B4Q8TF62 1192 aa13.91□□□□□ -0.18
LIMS2-210ENST00000413578 TMEM40Q8WWA1 233 aa13.91□□□□□ -0.18
LIMS2-210ENST00000413578 TNPO1Q92973 898 aaKnown RBP13.91□□□□□ -0.18
LIMS2-210ENST00000413578 AZI2Q9H6S1 392 aa13.91□□□□□ -0.18
LIMS2-210ENST00000413578 ERVK-5Q9HDB9 667 aa13.91□□□□□ -0.18
LIMS2-210ENST00000413578 USP15Q9Y4E8 981 aaPredicted RBP13.91□□□□□ -0.18
LIMS2-210ENST00000413578 ZDBF2Q9HCK1 2354 aa13.91□□□□□ -0.18
LIMS2-210ENST00000413578 M0QZ92 97 aa13.9□□□□□ -0.18
LIMS2-210ENST00000413578 MEIS1O00470 390 aa13.9□□□□□ -0.18
LIMS2-210ENST00000413578 SLC27A2O14975 620 aa13.9□□□□□ -0.18
LIMS2-210ENST00000413578 CCNE2O96020 404 aa13.9□□□□□ -0.18
LIMS2-210ENST00000413578 SLC26A2P50443 739 aa13.9□□□□□ -0.18
LIMS2-210ENST00000413578 KRT76Q01546 638 aa13.9□□□□□ -0.18
LIMS2-210ENST00000413578 UBE3AQ05086 875 aa13.9□□□□□ -0.18
LIMS2-210ENST00000413578 TMEM266Q2M3C6 531 aa13.9□□□□□ -0.18
LIMS2-210ENST00000413578 CEP55Q53EZ4 464 aa13.9□□□□□ -0.18
LIMS2-210ENST00000413578 NFXL1Q6ZNB6 911 aa13.9□□□□□ -0.18
LIMS2-210ENST00000413578 RAB11FIP4Q86YS3 637 aa13.9□□□□□ -0.18
LIMS2-210ENST00000413578 KIAA0319LQ8IZA0 1049 aa13.9□□□□□ -0.18
LIMS2-210ENST00000413578 FANCBQ8NB91 859 aa13.9□□□□□ -0.18
LIMS2-210ENST00000413578 VN1R2Q8NFZ6 395 aa13.9□□□□□ -0.18
LIMS2-210ENST00000413578 SUSD6Q92537 303 aa13.9□□□□□ -0.18
LIMS2-210ENST00000413578 AGO4Q9HCK5 861 aaKnown RBP13.9□□□□□ -0.18
LIMS2-210ENST00000413578 RIC8AQ9NPQ8 531 aa13.9□□□□□ -0.18
LIMS2-210ENST00000413578 BARX2Q9UMQ3 279 aaPredicted RBP13.9□□□□□ -0.18
LIMS2-210ENST00000413578 CACNA1HO95180 2353 aa13.9□□□□□ -0.18
LIMS2-210ENST00000413578 CNTNAP5Q8WYK1 1306 aa13.9□□□□□ -0.19
LIMS2-210ENST00000413578 ZBTB42B2RXF5 422 aa13.89□□□□□ -0.19
LIMS2-210ENST00000413578 C9IYK1 514 aa13.89□□□□□ -0.19
LIMS2-210ENST00000413578 FSCN2O14926 492 aa13.89□□□□□ -0.19
LIMS2-210ENST00000413578 CLK2P49760 499 aaKnown RBP13.89□□□□□ -0.19
LIMS2-210ENST00000413578 ZXDAP98168 799 aa13.89□□□□□ -0.19
LIMS2-210ENST00000413578 KCNC3Q14003 757 aa13.89□□□□□ -0.19
LIMS2-210ENST00000413578 PPP1R18Q6NYC8 613 aa13.89□□□□□ -0.19
LIMS2-210ENST00000413578 ABHD15Q6UXT9 468 aa13.89□□□□□ -0.19
LIMS2-210ENST00000413578 HEATR3Q7Z4Q2 680 aa13.89□□□□□ -0.19
LIMS2-210ENST00000413578 RBM23Q86U06 439 aaKnown RBP13.89□□□□□ -0.19
LIMS2-210ENST00000413578 CCDC82Q8N4S0 544 aa13.89□□□□□ -0.19
LIMS2-210ENST00000413578 SDF4Q9BRK5 362 aa13.89□□□□□ -0.19
LIMS2-210ENST00000413578 PHF7Q9BWX1 381 aaPredicted RBP13.89□□□□□ -0.19
LIMS2-210ENST00000413578 CDHR5Q9HBB8 845 aa13.89□□□□□ -0.19
LIMS2-210ENST00000413578 RGS18Q9NS28 235 aa13.89□□□□□ -0.19
LIMS2-210ENST00000413578 NOC2LQ9Y3T9 749 aaKnown RBP13.89□□□□□ -0.19
LIMS2-210ENST00000413578 SLC12A7Q9Y666 1083 aa13.89□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 20.5 ms