RNA–Protein interactions for RNA: ENST00000411092.1

RNU6-55P-201, Transcript of RNA, U6 small nuclear 55, pseudogene, humanhuman

BASIC

Gene RNU6-55P, Length 107 nt, Biotype snRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU6-55P-201ENST00000411092 CCSER2Q9H7U1 834 aa4.27□□□□□ -1.73
RNU6-55P-201ENST00000411092 MARCH2Q9P0N8 246 aa4.27□□□□□ -1.73
RNU6-55P-201ENST00000411092 ALKQ9UM73 1620 aa4.27□□□□□ -1.73
RNU6-55P-201ENST00000411092 EDC4Q6P2E9 1401 aaKnown RBP4.27□□□□□ -1.73
RNU6-55P-201ENST00000411092 SSH2Q76I76 1423 aa4.27□□□□□ -1.73
RNU6-55P-201ENST00000411092 AKAP12Q02952 1782 aa4.27□□□□□ -1.73
RNU6-55P-201ENST00000411092 SETD1AO15047 1707 aaKnown RBP4.26□□□□□ -1.73
RNU6-55P-201ENST00000411092 U2SURPO15042 1029 aaKnown RBP4.26□□□□□ -1.73
RNU6-55P-201ENST00000411092 PRICKLE3O43900 615 aaPredicted RBP4.26□□□□□ -1.73
RNU6-55P-201ENST00000411092 ZNF500O60304 480 aaPredicted RBP4.26□□□□□ -1.73
RNU6-55P-201ENST00000411092 OFD1O75665 1012 aa4.26□□□□□ -1.73
RNU6-55P-201ENST00000411092 REC8O95072 547 aa4.26□□□□□ -1.73
RNU6-55P-201ENST00000411092 MBD3O95983 291 aa4.26□□□□□ -1.73
RNU6-55P-201ENST00000411092 ZNF853P0CG23 659 aa4.26□□□□□ -1.73
RNU6-55P-201ENST00000411092 NAT2P11245 290 aa4.26□□□□□ -1.73
RNU6-55P-201ENST00000411092 MSNP26038 577 aaKnown RBP4.26□□□□□ -1.73
RNU6-55P-201ENST00000411092 TNNT2P45379 298 aaPredicted RBP4.26□□□□□ -1.73
RNU6-55P-201ENST00000411092 ZNF143P52747 638 aaPredicted RBP4.26□□□□□ -1.73
RNU6-55P-201ENST00000411092 DLX2Q07687 328 aaPredicted RBP4.26□□□□□ -1.73
RNU6-55P-201ENST00000411092 CACNB2Q08289 660 aaPredicted RBP4.26□□□□□ -1.73
RNU6-55P-201ENST00000411092 RTP5Q14D33 572 aa4.26□□□□□ -1.73
RNU6-55P-201ENST00000411092 NCAPHQ15003 741 aa4.26□□□□□ -1.73
RNU6-55P-201ENST00000411092 INF2Q27J81 1249 aa4.26□□□□□ -1.73
RNU6-55P-201ENST00000411092 NT5DC1Q5TFE4 455 aa4.26□□□□□ -1.73
RNU6-55P-201ENST00000411092 GTF2IRD2BQ6EKJ0 949 aa4.26□□□□□ -1.73
RNU6-55P-201ENST00000411092 PRRT2Q7Z6L0 340 aaPredicted RBP4.26□□□□□ -1.73
RNU6-55P-201ENST00000411092 GTF2IRD2Q86UP8 949 aa4.26□□□□□ -1.73
RNU6-55P-201ENST00000411092 TRIM59Q8IWR1 403 aa4.26□□□□□ -1.73
RNU6-55P-201ENST00000411092 HOMEZQ8IX15 550 aa4.26□□□□□ -1.73
RNU6-55P-201ENST00000411092 CPA5Q8WXQ8 436 aa4.26□□□□□ -1.73
RNU6-55P-201ENST00000411092 DPF3Q92784 378 aa4.26□□□□□ -1.73
RNU6-55P-201ENST00000411092 DDX11Q96FC9 970 aa4.26□□□□□ -1.73
RNU6-55P-201ENST00000411092 BDH2Q9BUT1 245 aa4.26□□□□□ -1.73
RNU6-55P-201ENST00000411092 NKX2-4Q9H2Z4 354 aa4.26□□□□□ -1.73
RNU6-55P-201ENST00000411092 CYP26B1Q9NR63 512 aa4.26□□□□□ -1.73
RNU6-55P-201ENST00000411092 USP40Q9NVE5 1235 aa4.26□□□□□ -1.73
RNU6-55P-201ENST00000411092 BTG4Q9NY30 223 aa4.26□□□□□ -1.73
RNU6-55P-201ENST00000411092 MRVI1Q9Y6F6 885 aa4.26□□□□□ -1.73
RNU6-55P-201ENST00000411092 ARHGEF10O15013 1369 aa4.26□□□□□ -1.73
RNU6-55P-201ENST00000411092 KIAA0232Q92628 1395 aa4.26□□□□□ -1.73
RNU6-55P-201ENST00000411092 C3P01024 1663 aa4.26□□□□□ -1.73
RNU6-55P-201ENST00000411092 TUBGCP6Q96RT7 1819 aa4.25□□□□□ -1.73
RNU6-55P-201ENST00000411092 PTPRCP08575 1304 aa4.25□□□□□ -1.73
RNU6-55P-201ENST00000411092 RIMBP3CA6NJZ7 1639 aa4.25□□□□□ -1.73
RNU6-55P-201ENST00000411092 RIMBP3BA6NNM3 1639 aa4.25□□□□□ -1.73
RNU6-55P-201ENST00000411092 RIMBP3Q9UFD9 1639 aa4.25□□□□□ -1.73
RNU6-55P-201ENST00000411092 SMAD7O15105 426 aaKnown RBP4.25□□□□□ -1.73
RNU6-55P-201ENST00000411092 FYB1O15117 783 aa4.25□□□□□ -1.73
RNU6-55P-201ENST00000411092 HMMRO75330 724 aa4.25□□□□□ -1.73
RNU6-55P-201ENST00000411092 BAG4O95429 457 aaKnown RBP4.25□□□□□ -1.73
RNU6-55P-201ENST00000411092 PLP2Q04941 152 aa4.25□□□□□ -1.73
RNU6-55P-201ENST00000411092 CYP4F3Q08477 520 aa4.25□□□□□ -1.73
RNU6-55P-201ENST00000411092 TTC22Q5TAA0 569 aa4.25□□□□□ -1.73
RNU6-55P-201ENST00000411092 C6orf15Q6UXA7 325 aaPredicted RBP4.25□□□□□ -1.73
RNU6-55P-201ENST00000411092 FERMT3Q86UX7 667 aa4.25□□□□□ -1.73
RNU6-55P-201ENST00000411092 DCP2Q8IU60 420 aaKnown RBP4.25□□□□□ -1.73
RNU6-55P-201ENST00000411092 TEX2Q8IWB9 1127 aa4.25□□□□□ -1.73
RNU6-55P-201ENST00000411092 RPAP2Q8IXW5 612 aaPredicted RBP4.25□□□□□ -1.73
RNU6-55P-201ENST00000411092 NALCNQ8IZF0 1738 aa4.25□□□□□ -1.73
RNU6-55P-201ENST00000411092 CARFQ8N187 725 aa4.25□□□□□ -1.73
RNU6-55P-201ENST00000411092 FAM184AQ8NB25 1140 aa4.25□□□□□ -1.73
RNU6-55P-201ENST00000411092 FRS2Q8WU20 508 aa4.25□□□□□ -1.73
RNU6-55P-201ENST00000411092 SYAP1Q96A49 352 aaPredicted RBP4.25□□□□□ -1.73
RNU6-55P-201ENST00000411092 ZBTB8AQ96BR9 441 aa4.25□□□□□ -1.73
RNU6-55P-201ENST00000411092 IL17RAQ96F46 866 aa4.25□□□□□ -1.73
RNU6-55P-201ENST00000411092 PDLIM2Q96JY6 352 aa4.25□□□□□ -1.73
RNU6-55P-201ENST00000411092 MRGPRX3Q96LB0 322 aa4.25□□□□□ -1.73
RNU6-55P-201ENST00000411092 LNPKQ9C0E8 428 aa4.25□□□□□ -1.73
RNU6-55P-201ENST00000411092 DCTPP1Q9H773 170 aa4.25□□□□□ -1.73
RNU6-55P-201ENST00000411092 SPATA6Q9NWH7 488 aaPredicted RBP4.25□□□□□ -1.73
RNU6-55P-201ENST00000411092 NOL7Q9UMY1 257 aaKnown RBP4.25□□□□□ -1.73
RNU6-55P-201ENST00000411092 RIMS2Q9UQ26 1411 aa4.25□□□□□ -1.73
RNU6-55P-201ENST00000411092 TNNQ9UQP3 1299 aa4.25□□□□□ -1.73
RNU6-55P-201ENST00000411092 DDX49Q9Y6V7 483 aaKnown RBP4.25□□□□□ -1.73
RNU6-55P-201ENST00000411092 AGLP35573 1532 aa4.25□□□□□ -1.73
RNU6-55P-201ENST00000411092 SOS1Q07889 1333 aaPredicted RBP4.24□□□□□ -1.73
RNU6-55P-201ENST00000411092 RGPD1P0DJD0 1748 aa4.24□□□□□ -1.73
RNU6-55P-201ENST00000411092 SPATA31D1Q6ZQQ2 1576 aa4.24□□□□□ -1.73
RNU6-55P-201ENST00000411092 TECPR2O15040 1411 aa4.24□□□□□ -1.73
RNU6-55P-201ENST00000411092 ATP10DQ9P241 1426 aa4.24□□□□□ -1.73
RNU6-55P-201ENST00000411092 SGSM2O43147 1006 aa4.24□□□□□ -1.73
RNU6-55P-201ENST00000411092 TBX1O43435 398 aa4.24□□□□□ -1.73
RNU6-55P-201ENST00000411092 FPR2P25090 351 aa4.24□□□□□ -1.73
RNU6-55P-201ENST00000411092 ANAPC15P60006 121 aa4.24□□□□□ -1.73
RNU6-55P-201ENST00000411092 NFKB2Q00653 900 aa4.24□□□□□ -1.73
RNU6-55P-201ENST00000411092 SMAD4Q13485 552 aaKnown RBP4.24□□□□□ -1.73
RNU6-55P-201ENST00000411092 SV2CQ496J9 727 aa4.24□□□□□ -1.73
RNU6-55P-201ENST00000411092 UBXN11Q5T124 520 aa4.24□□□□□ -1.73
RNU6-55P-201ENST00000411092 ZFYVE27Q5T4F4 411 aa4.24□□□□□ -1.73
RNU6-55P-201ENST00000411092 ANKRD45Q5TZF3 282 aa4.24□□□□□ -1.73
RNU6-55P-201ENST00000411092 LARP1BQ659C4 914 aaKnown RBP4.24□□□□□ -1.73
RNU6-55P-201ENST00000411092 NPLOC4Q8TAT6 608 aa4.24□□□□□ -1.73
RNU6-55P-201ENST00000411092 BTN2A2Q8WVV5 523 aa4.24□□□□□ -1.73
RNU6-55P-201ENST00000411092 SYT3Q9BQG1 590 aa4.24□□□□□ -1.73
RNU6-55P-201ENST00000411092 CAPN10Q9HC96 672 aa4.24□□□□□ -1.73
RNU6-55P-201ENST00000411092 NTMQ9P121 344 aa4.24□□□□□ -1.73
RNU6-55P-201ENST00000411092 CPS1P31327 1500 aa4.24□□□□□ -1.73
RNU6-55P-201ENST00000411092 RTL1A6NKG5 1358 aa4.24□□□□□ -1.73
RNU6-55P-201ENST00000411092 PXDNLA1KZ92 1463 aa4.24□□□□□ -1.73
RNU6-55P-201ENST00000411092 AOX1Q06278 1338 aa4.23□□□□□ -1.73
Retrieved 100 of 20,778 RNA–protein pairs in 33.3 ms