RNA–Protein interactions for RNA: ENST00000409604.1

SNX13-202, Transcript of sorting nexin 13, humanhuman

TSL 1 (best) BASIC

Gene SNX13, Length 4,146 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX13-202ENST00000409604 PIK3CAP42336 1068 aa12.47□□□□□ -0.41
SNX13-202ENST00000409604 FAM193BQ96PV7 902 aaPredicted RBP12.47□□□□□ -0.41
SNX13-202ENST00000409604 CEP83Q9Y592 693 aa12.47□□□□□ -0.41
SNX13-202ENST00000409604 ANKRD62A6NC57 917 aa12.46□□□□□ -0.41
SNX13-202ENST00000409604 CCDC172P0C7W6 258 aa12.46□□□□□ -0.41
SNX13-202ENST00000409604 PTPAQ15257 358 aa12.46□□□□□ -0.41
SNX13-202ENST00000409604 MAPK6Q16659 721 aa12.46□□□□□ -0.41
SNX13-202ENST00000409604 ZNF568Q3ZCX4 644 aa12.46□□□□□ -0.41
SNX13-202ENST00000409604 KIAA1755Q5JYT7 1200 aa12.46□□□□□ -0.41
SNX13-202ENST00000409604 PLEKHH3Q7Z736 793 aa12.46□□□□□ -0.41
SNX13-202ENST00000409604 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP12.46□□□□□ -0.41
SNX13-202ENST00000409604 GMCL1P1Q8NEA9 526 aa12.46□□□□□ -0.41
SNX13-202ENST00000409604 TRIM17Q9Y577 477 aa12.46□□□□□ -0.41
SNX13-202ENST00000409604 MYH14Q7Z406 1995 aaKnown RBP12.46□□□□□ -0.41
SNX13-202ENST00000409604 SDK1Q7Z5N4 2213 aa12.46□□□□□ -0.41
SNX13-202ENST00000409604 GSTTP1A0A1W2PQM5 241 aa12.46□□□□□ -0.41
SNX13-202ENST00000409604 PPP1R11O60927 126 aaPredicted RBP12.46□□□□□ -0.41
SNX13-202ENST00000409604 GFPT2O94808 682 aa12.46□□□□□ -0.41
SNX13-202ENST00000409604 TNFAIP2Q03169 654 aa12.46□□□□□ -0.41
SNX13-202ENST00000409604 PPFIA1Q13136 1202 aa12.46□□□□□ -0.41
SNX13-202ENST00000409604 TFDP1Q14186 410 aa12.46□□□□□ -0.41
SNX13-202ENST00000409604 KRT31Q15323 416 aa12.46□□□□□ -0.41
SNX13-202ENST00000409604 EPHA7Q15375 998 aa12.46□□□□□ -0.41
SNX13-202ENST00000409604 SLC9C1Q4G0N8 1177 aa12.46□□□□□ -0.41
SNX13-202ENST00000409604 SCFD2Q8WU76 684 aa12.46□□□□□ -0.41
SNX13-202ENST00000409604 RNF34Q969K3 372 aa12.46□□□□□ -0.41
SNX13-202ENST00000409604 ARGLU1Q9NWB6 273 aaPredicted RBP12.46□□□□□ -0.41
SNX13-202ENST00000409604 STK24Q9Y6E0 443 aa12.46□□□□□ -0.41
SNX13-202ENST00000409604 ZSCAN20P17040 1043 aaPredicted RBP12.46□□□□□ -0.42
SNX13-202ENST00000409604 ERVK-9P63128 1117 aa12.46□□□□□ -0.42
SNX13-202ENST00000409604 ERVK-24P63145 666 aa12.46□□□□□ -0.42
SNX13-202ENST00000409604 RBL2Q08999 1139 aa12.46□□□□□ -0.42
SNX13-202ENST00000409604 SFMBT2Q5VUG0 894 aa12.46□□□□□ -0.42
SNX13-202ENST00000409604 GBP6Q6ZN66 633 aa12.46□□□□□ -0.42
SNX13-202ENST00000409604 UNC13DQ70J99 1090 aa12.46□□□□□ -0.42
SNX13-202ENST00000409604 FAM133AQ8N9E0 248 aa12.46□□□□□ -0.42
SNX13-202ENST00000409604 IWS1Q96ST2 819 aa12.46□□□□□ -0.42
SNX13-202ENST00000409604 MTRQ99707 1265 aa12.46□□□□□ -0.42
SNX13-202ENST00000409604 PORCNQ9H237 461 aa12.46□□□□□ -0.42
SNX13-202ENST00000409604 SPOPO43791 374 aa12.45□□□□□ -0.42
SNX13-202ENST00000409604 PPATQ06203 517 aa12.45□□□□□ -0.42
SNX13-202ENST00000409604 PPP2R5AQ15172 486 aa12.45□□□□□ -0.42
SNX13-202ENST00000409604 TXLNBQ8N3L3 684 aa12.45□□□□□ -0.42
SNX13-202ENST00000409604 TIGD1Q96MW7 591 aa12.45□□□□□ -0.42
SNX13-202ENST00000409604 UBE2TQ9NPD8 197 aaPredicted RBP12.45□□□□□ -0.42
SNX13-202ENST00000409604 C1orf112Q9NSG2 853 aa12.45□□□□□ -0.42
SNX13-202ENST00000409604 EML1O00423 815 aa12.45□□□□□ -0.42
SNX13-202ENST00000409604 KRT86O43790 486 aa12.45□□□□□ -0.42
SNX13-202ENST00000409604 PGK1P00558 417 aa12.45□□□□□ -0.42
SNX13-202ENST00000409604 TNNC2P02585 160 aa12.45□□□□□ -0.42
SNX13-202ENST00000409604 FDX1P10109 184 aa12.45□□□□□ -0.42
SNX13-202ENST00000409604 RARBP10826 455 aa12.45□□□□□ -0.42
SNX13-202ENST00000409604 FGFR4P22455 802 aa12.45□□□□□ -0.42
SNX13-202ENST00000409604 PSMC2P35998 433 aaKnown RBP12.45□□□□□ -0.42
SNX13-202ENST00000409604 CETN2P41208 172 aa12.45□□□□□ -0.42
SNX13-202ENST00000409604 STAT1P42224 750 aa12.45□□□□□ -0.42
SNX13-202ENST00000409604 PTGER2P43116 358 aa12.45□□□□□ -0.42
SNX13-202ENST00000409604 FKBP1CQ5VVH2 108 aa12.45□□□□□ -0.42
SNX13-202ENST00000409604 ANKRD40Q6AI12 368 aa12.45□□□□□ -0.42
SNX13-202ENST00000409604 DCUN1D2Q6PH85 259 aa12.45□□□□□ -0.42
SNX13-202ENST00000409604 TRIML1Q8N9V2 468 aa12.45□□□□□ -0.42
SNX13-202ENST00000409604 VPS33BQ9H267 617 aa12.45□□□□□ -0.42
SNX13-202ENST00000409604 PXMP2Q9NR77 195 aa12.45□□□□□ -0.42
SNX13-202ENST00000409604 SPTLC3Q9NUV7 552 aa12.45□□□□□ -0.42
SNX13-202ENST00000409604 GCNT4Q9P109 453 aa12.45□□□□□ -0.42
SNX13-202ENST00000409604 GLI3P10071 1580 aa12.45□□□□□ -0.42
SNX13-202ENST00000409604 SPDYE16A6NNV3 312 aaPredicted RBP12.45□□□□□ -0.42
SNX13-202ENST00000409604 ATP9AO75110 1047 aa12.45□□□□□ -0.42
SNX13-202ENST00000409604 RHOXF2BP0C7M4 288 aa12.45□□□□□ -0.42
SNX13-202ENST00000409604 KIZQ2M2Z5 673 aa12.45□□□□□ -0.42
SNX13-202ENST00000409604 TATDN1Q6P1N9 297 aa12.45□□□□□ -0.42
SNX13-202ENST00000409604 TAX1BP1Q86VP1 789 aa12.45□□□□□ -0.42
SNX13-202ENST00000409604 CCDC155Q8N6L0 562 aa12.45□□□□□ -0.42
SNX13-202ENST00000409604 CACTINQ8WUQ7 758 aaKnown RBP12.45□□□□□ -0.42
SNX13-202ENST00000409604 LENG1Q96BZ8 264 aaPredicted RBP12.45□□□□□ -0.42
SNX13-202ENST00000409604 RHOXF2Q9BQY4 288 aa12.45□□□□□ -0.42
SNX13-202ENST00000409604 RUSC1Q9BVN2 902 aa12.45□□□□□ -0.42
SNX13-202ENST00000409604 CCDC113Q9H0I3 377 aa12.45□□□□□ -0.42
SNX13-202ENST00000409604 SUCLA2Q9P2R7 463 aaPredicted RBP12.45□□□□□ -0.42
SNX13-202ENST00000409604 PAXBP1Q9Y5B6 917 aa12.45□□□□□ -0.42
SNX13-202ENST00000409604 SCN11AQ9UI33 1791 aa12.44□□□□□ -0.42
SNX13-202ENST00000409604 EIF3JO75822 258 aaKnown RBP12.44□□□□□ -0.42
SNX13-202ENST00000409604 SLC25A27O95847 323 aa12.44□□□□□ -0.42
SNX13-202ENST00000409604 HOXD10P28358 340 aa12.44□□□□□ -0.42
SNX13-202ENST00000409604 RGMBQ6NW40 437 aa12.44□□□□□ -0.42
SNX13-202ENST00000409604 RSPH3Q86UC2 560 aa12.44□□□□□ -0.42
SNX13-202ENST00000409604 OR8K1Q8NGG5 319 aa12.44□□□□□ -0.42
SNX13-202ENST00000409604 ZBTB10Q96DT7 871 aa12.44□□□□□ -0.42
SNX13-202ENST00000409604 MED10Q9BTT4 135 aa12.44□□□□□ -0.42
SNX13-202ENST00000409604 TRIM31Q9BZY9 425 aa12.44□□□□□ -0.42
SNX13-202ENST00000409604 CUEDC2Q9H467 287 aa12.44□□□□□ -0.42
SNX13-202ENST00000409604 PYCARDQ9ULZ3 195 aa12.44□□□□□ -0.42
SNX13-202ENST00000409604 VTNP04004 478 aa12.44□□□□□ -0.42
SNX13-202ENST00000409604 NR3C1P04150 777 aa12.44□□□□□ -0.42
SNX13-202ENST00000409604 ELNP15502 786 aa12.44□□□□□ -0.42
SNX13-202ENST00000409604 PPP1R2P41236 205 aa12.44□□□□□ -0.42
SNX13-202ENST00000409604 MYL7Q01449 175 aa12.44□□□□□ -0.42
SNX13-202ENST00000409604 SREBF2Q12772 1141 aa12.44□□□□□ -0.42
SNX13-202ENST00000409604 CHST13Q8NET6 341 aa12.44□□□□□ -0.42
SNX13-202ENST00000409604 NACA2Q9H009 215 aa12.44□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 28 ms