RNA–Protein interactions for RNA: ENST00000404914.7

ATG4B-205, Transcript of autophagy related 4B cysteine peptidase, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene ATG4B, Length 2,878 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4B-205ENST00000404914 AGBL2Q5U5Z8 902 aa16.95■□□□□ 0.3
ATG4B-205ENST00000404914 GKAP1Q5VSY0 366 aaPredicted RBP16.95■□□□□ 0.3
ATG4B-205ENST00000404914 HIBCHQ6NVY1 386 aaPredicted RBP16.95■□□□□ 0.3
ATG4B-205ENST00000404914 RUFY4Q6ZNE9 571 aa16.95■□□□□ 0.3
ATG4B-205ENST00000404914 RBM46Q8TBY0 533 aaKnown RBP16.95■□□□□ 0.3
ATG4B-205ENST00000404914 STK17AQ9UEE5 414 aa16.95■□□□□ 0.3
ATG4B-205ENST00000404914 SAP30BPQ9UHR5 308 aaKnown RBP16.95■□□□□ 0.3
ATG4B-205ENST00000404914 ATP8A1Q9Y2Q0 1164 aa16.95■□□□□ 0.3
ATG4B-205ENST00000404914 PGRMC1O00264 195 aaKnown RBP16.95■□□□□ 0.3
ATG4B-205ENST00000404914 PPIP5K2O43314 1243 aa16.95■□□□□ 0.3
ATG4B-205ENST00000404914 GRIK5Q16478 980 aa16.95■□□□□ 0.3
ATG4B-205ENST00000404914 ADAT2Q7Z6V5 191 aaKnown RBP16.95■□□□□ 0.3
ATG4B-205ENST00000404914 ATP8B4Q8TF62 1192 aa16.95■□□□□ 0.3
ATG4B-205ENST00000404914 XPO6Q96QU8 1125 aaKnown RBP16.95■□□□□ 0.3
ATG4B-205ENST00000404914 EPB41L4BQ9H329 900 aa16.95■□□□□ 0.3
ATG4B-205ENST00000404914 SKAP2O75563 359 aaPredicted RBP16.95■□□□□ 0.3
ATG4B-205ENST00000404914 MRPL12P52815 198 aaKnown RBP16.95■□□□□ 0.3
ATG4B-205ENST00000404914 TPCN2Q8NHX9 752 aa16.95■□□□□ 0.3
ATG4B-205ENST00000404914 COA7Q96BR5 231 aa16.95■□□□□ 0.3
ATG4B-205ENST00000404914 BUD13Q9BRD0 619 aaKnown RBP eCLIP16.95■□□□□ 0.36e-7■□□□□ 10.7
ATG4B-205ENST00000404914 C6orf50Q9HD87 102 aa16.95■□□□□ 0.3
ATG4B-205ENST00000404914 RIC8AQ9NPQ8 531 aa16.95■□□□□ 0.3
ATG4B-205ENST00000404914 BAIAP2L1Q9UHR4 511 aa16.95■□□□□ 0.3
ATG4B-205ENST00000404914 CTNND1O60716 968 aaKnown RBP16.94■□□□□ 0.3
ATG4B-205ENST00000404914 ATP6V1G2O95670 118 aa16.94■□□□□ 0.3
ATG4B-205ENST00000404914 GCFC2P16383 781 aaKnown RBP16.94■□□□□ 0.3
ATG4B-205ENST00000404914 FAM26FQ5R3K3 315 aa16.94■□□□□ 0.3
ATG4B-205ENST00000404914 STAMBPL1Q96FJ0 436 aa16.94■□□□□ 0.3
ATG4B-205ENST00000404914 PSMD1Q99460 953 aa16.94■□□□□ 0.3
ATG4B-205ENST00000404914 NOD2Q9HC29 1040 aa16.94■□□□□ 0.3
ATG4B-205ENST00000404914 LUC7LQ9NQ29 371 aaKnown RBP16.94■□□□□ 0.3
ATG4B-205ENST00000404914 NAGPAQ9UK23 515 aa16.94■□□□□ 0.3
ATG4B-205ENST00000404914 SMIM23A6NLE4 172 aa16.94■□□□□ 0.3
ATG4B-205ENST00000404914 CLNS1AP54105 237 aaKnown RBP16.94■□□□□ 0.3
ATG4B-205ENST00000404914 PPP1R7Q15435 360 aa16.94■□□□□ 0.3
ATG4B-205ENST00000404914 DIXDC1Q155Q3 683 aa16.94■□□□□ 0.3
ATG4B-205ENST00000404914 ERMARDQ5T6L9 678 aa16.94■□□□□ 0.3
ATG4B-205ENST00000404914 REXO1Q8N1G1 1221 aaKnown RBP16.94■□□□□ 0.3
ATG4B-205ENST00000404914 C3orf20Q8ND61 904 aa16.94■□□□□ 0.3
ATG4B-205ENST00000404914 TLCD1Q96CP7 247 aa16.94■□□□□ 0.3
ATG4B-205ENST00000404914 ZNF317Q96PQ6 595 aaPredicted RBP16.94■□□□□ 0.3
ATG4B-205ENST00000404914 ADAM7Q9H2U9 754 aa16.94■□□□□ 0.3
ATG4B-205ENST00000404914 PANK4Q9NVE7 773 aa16.94■□□□□ 0.3
ATG4B-205ENST00000404914 ZNF831Q5JPB2 1677 aa16.94■□□□□ 0.3
ATG4B-205ENST00000404914 E9PMD0 336 aa16.93■□□□□ 0.3
ATG4B-205ENST00000404914 RASA1P20936 1047 aa16.93■□□□□ 0.3
ATG4B-205ENST00000404914 FXR2P51116 673 aaKnown RBP eCLIP16.93■□□□□ 0.3
ATG4B-205ENST00000404914 KCNH2Q12809 1159 aa16.93■□□□□ 0.3
ATG4B-205ENST00000404914 TMEM119Q4V9L6 283 aa16.93■□□□□ 0.3
ATG4B-205ENST00000404914 GJB7Q6PEY0 223 aa16.93■□□□□ 0.3
ATG4B-205ENST00000404914 PBKQ96KB5 322 aa16.93■□□□□ 0.3
ATG4B-205ENST00000404914 NUCKS1Q9H1E3 243 aaKnown RBP16.93■□□□□ 0.3
ATG4B-205ENST00000404914 CCDC87Q9NVE4 849 aa16.93■□□□□ 0.3
ATG4B-205ENST00000404914 GGT7Q9UJ14 662 aa16.93■□□□□ 0.3
ATG4B-205ENST00000404914 L3MBTL1Q9Y468 752 aa16.93■□□□□ 0.3
ATG4B-205ENST00000404914 DNAJC8O75937 253 aaPredicted RBP16.93■□□□□ 0.3
ATG4B-205ENST00000404914 CHN1P15882 459 aa16.93■□□□□ 0.3
ATG4B-205ENST00000404914 POU5F1Q01860 360 aaKnown RBP16.93■□□□□ 0.3
ATG4B-205ENST00000404914 ALKBH5Q6P6C2 394 aaKnown RBP16.93■□□□□ 0.3
ATG4B-205ENST00000404914 CCDC24Q8N4L8 307 aa16.93■□□□□ 0.3
ATG4B-205ENST00000404914 EIF1ADQ8N9N8 165 aaKnown RBP16.93■□□□□ 0.3
ATG4B-205ENST00000404914 SCFD1Q8WVM8 642 aa16.93■□□□□ 0.3
ATG4B-205ENST00000404914 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP16.93■□□□□ 0.36e-11■■■■■ 51.9
ATG4B-205ENST00000404914 CHMP6Q96FZ7 201 aa16.93■□□□□ 0.3
ATG4B-205ENST00000404914 TACO1Q9BSH4 297 aaKnown RBP16.93■□□□□ 0.3
ATG4B-205ENST00000404914 SLC24A3Q9HC58 644 aa16.93■□□□□ 0.3
ATG4B-205ENST00000404914 BSDC1Q9NW68 430 aaPredicted RBP16.93■□□□□ 0.3
ATG4B-205ENST00000404914 PCDHA2Q9Y5H9 948 aa16.93■□□□□ 0.3
ATG4B-205ENST00000404914 PARP10Q53GL7 1025 aa16.92■□□□□ 0.3
ATG4B-205ENST00000404914 UHMK1Q8TAS1 419 aaKnown RBP16.92■□□□□ 0.3
ATG4B-205ENST00000404914 TCP11Q8WWU5 503 aa16.92■□□□□ 0.3
ATG4B-205ENST00000404914 FAM129AQ9BZQ8 928 aa16.92■□□□□ 0.3
ATG4B-205ENST00000404914 AGAP1Q9UPQ3 857 aa16.92■□□□□ 0.3
ATG4B-205ENST00000404914 STXBP5LQ9Y2K9 1186 aa16.92■□□□□ 0.3
ATG4B-205ENST00000404914 CCT8L1PA6NM43 557 aa16.92■□□□□ 0.3
ATG4B-205ENST00000404914 CES2O00748 559 aa16.92■□□□□ 0.3
ATG4B-205ENST00000404914 CDC25CP30307 473 aa16.92■□□□□ 0.3
ATG4B-205ENST00000404914 CASP5P51878 434 aa16.92■□□□□ 0.3
ATG4B-205ENST00000404914 IFI35P80217 286 aaPredicted RBP16.92■□□□□ 0.3
ATG4B-205ENST00000404914 PEX26Q7Z412 305 aa16.92■□□□□ 0.3
ATG4B-205ENST00000404914 TGFBRAP1Q8WUH2 860 aa16.92■□□□□ 0.3
ATG4B-205ENST00000404914 SPZ1Q9BXG8 430 aa16.92■□□□□ 0.3
ATG4B-205ENST00000404914 KCTD10Q9H3F6 313 aa16.92■□□□□ 0.3
ATG4B-205ENST00000404914 ERVK-5Q9HDB9 667 aa16.92■□□□□ 0.3
ATG4B-205ENST00000404914 ATAD5Q96QE3 1844 aa16.92■□□□□ 0.3
ATG4B-205ENST00000404914 EZRP15311 586 aaKnown RBP16.91■□□□□ 0.3
ATG4B-205ENST00000404914 GNA11P29992 359 aa16.91■□□□□ 0.3
ATG4B-205ENST00000404914 DCAF12L1Q5VU92 463 aa16.91■□□□□ 0.3
ATG4B-205ENST00000404914 MSL1Q68DK7 614 aa16.91■□□□□ 0.3
ATG4B-205ENST00000404914 HOMEZQ8IX15 550 aa16.91■□□□□ 0.3
ATG4B-205ENST00000404914 LRRC34Q8IZ02 419 aa16.91■□□□□ 0.3
ATG4B-205ENST00000404914 ZNF444Q8N0Y2 327 aaPredicted RBP16.91■□□□□ 0.3
ATG4B-205ENST00000404914 SELENOSQ9BQE4 189 aa16.91■□□□□ 0.3
ATG4B-205ENST00000404914 TXLNGYQ9BZA5 131 aa16.91■□□□□ 0.3
ATG4B-205ENST00000404914 KDM4CQ9H3R0 1056 aa16.91■□□□□ 0.3
ATG4B-205ENST00000404914 BCAS3Q9H6U6 928 aa16.91■□□□□ 0.3
ATG4B-205ENST00000404914 OSGEPQ9NPF4 335 aa16.91■□□□□ 0.3
ATG4B-205ENST00000404914 FRMPD2Q68DX3 1309 aaPredicted RBP16.91■□□□□ 0.3
ATG4B-205ENST00000404914 IFFO1Q0D2I5 559 aa16.91■□□□□ 0.3
ATG4B-205ENST00000404914 UBE2SQ16763 222 aa16.91■□□□□ 0.3
Retrieved 100 of 20,778 RNA–protein pairs in 1558.5 ms