RNA–Protein interactions for RNA: ENST00000399903.6

PTPRA-205, Transcript of protein tyrosine phosphatase, receptor type A, humanhuman

TSL 5 BASIC

Gene PTPRA, Length 3,337 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRA-205ENST00000399903 ATP8A2Q9NTI2 1148 aa18.61■□□□□ 0.57
PTPRA-205ENST00000399903 SIK3Q9Y2K2 1263 aa18.61■□□□□ 0.57
PTPRA-205ENST00000399903 PNMA1Q8ND90 353 aa18.61■□□□□ 0.57
PTPRA-205ENST00000399903 GGA1Q9UJY5 639 aa18.61■□□□□ 0.57
PTPRA-205ENST00000399903 TNRC6CQ9HCJ0 1690 aaKnown RBP18.6■□□□□ 0.57
PTPRA-205ENST00000399903 A0A1W2PQJ5 194 aa18.6■□□□□ 0.57
PTPRA-205ENST00000399903 TRAF5O00463 557 aa18.6■□□□□ 0.57
PTPRA-205ENST00000399903 MAN2A1Q16706 1144 aa18.6■□□□□ 0.57
PTPRA-205ENST00000399903 INPP4AQ96PE3 977 aaPredicted RBP18.6■□□□□ 0.57
PTPRA-205ENST00000399903 MTFR1LQ9H019 292 aa18.6■□□□□ 0.57
PTPRA-205ENST00000399903 ZHX3Q9H4I2 956 aa18.6■□□□□ 0.57
PTPRA-205ENST00000399903 RNF14Q9UBS8 474 aa18.6■□□□□ 0.57
PTPRA-205ENST00000399903 CNTNAP5Q8WYK1 1306 aa18.6■□□□□ 0.57
PTPRA-205ENST00000399903 ECM29Q5VYK3 1845 aa18.6■□□□□ 0.57
PTPRA-205ENST00000399903 MPHOSPH10O00566 681 aaKnown RBP18.6■□□□□ 0.57
PTPRA-205ENST00000399903 SCNN1DP51172 638 aa18.6■□□□□ 0.57
PTPRA-205ENST00000399903 CDK17Q00537 523 aa18.6■□□□□ 0.57
PTPRA-205ENST00000399903 C12orf60Q5U649 245 aa18.6■□□□□ 0.57
PTPRA-205ENST00000399903 NELFCDQ8IXH7 590 aa18.6■□□□□ 0.57
PTPRA-205ENST00000399903 GLIS3Q8NEA6 775 aa18.6■□□□□ 0.57
PTPRA-205ENST00000399903 CDK5RAP3Q96JB5 506 aa18.6■□□□□ 0.57
PTPRA-205ENST00000399903 KDM4CQ9H3R0 1056 aa18.6■□□□□ 0.57
PTPRA-205ENST00000399903 INTS9Q9NV88 658 aaKnown RBP18.6■□□□□ 0.57
PTPRA-205ENST00000399903 RBM28Q9NW13 759 aaKnown RBP18.6■□□□□ 0.57
PTPRA-205ENST00000399903 ARPP21Q9UBL0 812 aaPredicted RBP18.6■□□□□ 0.57
PTPRA-205ENST00000399903 TRPC5Q9UL62 973 aaPredicted RBP18.6■□□□□ 0.57
PTPRA-205ENST00000399903 BCORQ6W2J9 1755 aa18.6■□□□□ 0.57
PTPRA-205ENST00000399903 PPIP5K2O43314 1243 aa18.59■□□□□ 0.57
PTPRA-205ENST00000399903 CCNT1O60563 726 aaKnown RBP18.59■□□□□ 0.57
PTPRA-205ENST00000399903 DNAJC8O75937 253 aaPredicted RBP18.59■□□□□ 0.57
PTPRA-205ENST00000399903 UBOX5O94941 541 aa18.59■□□□□ 0.57
PTPRA-205ENST00000399903 SLC8A3P57103 927 aa18.59■□□□□ 0.57
PTPRA-205ENST00000399903 ARMC3Q5W041 872 aa18.59■□□□□ 0.57
PTPRA-205ENST00000399903 ZNF444Q8N0Y2 327 aaPredicted RBP18.59■□□□□ 0.57
PTPRA-205ENST00000399903 KIAA0895Q8NCT3 520 aa18.59■□□□□ 0.57
PTPRA-205ENST00000399903 WDR66Q8TBY9 1149 aa18.59■□□□□ 0.57
PTPRA-205ENST00000399903 KLHL29Q96CT2 875 aa18.59■□□□□ 0.57
PTPRA-205ENST00000399903 AGAP1Q9UPQ3 857 aa18.59■□□□□ 0.57
PTPRA-205ENST00000399903 RREB1Q92766 1687 aa18.59■□□□□ 0.57
PTPRA-205ENST00000399903 GRID2IPA4D2P6 1211 aa18.59■□□□□ 0.57
PTPRA-205ENST00000399903 H0YGN5 161 aa18.59■□□□□ 0.57
PTPRA-205ENST00000399903 IGF2BP3O00425 579 aaKnown RBP eCLIP18.59■□□□□ 0.57
PTPRA-205ENST00000399903 SHBGP04278 402 aa18.59■□□□□ 0.57
PTPRA-205ENST00000399903 FAM83BQ5T0W9 1011 aa18.59■□□□□ 0.57
PTPRA-205ENST00000399903 LRIG3Q6UXM1 1119 aa18.59■□□□□ 0.57
PTPRA-205ENST00000399903 ERICH1Q86X53 443 aa18.59■□□□□ 0.57
PTPRA-205ENST00000399903 PROM2Q8N271 834 aa18.59■□□□□ 0.57
PTPRA-205ENST00000399903 RNF10Q8N5U6 811 aaKnown RBP18.59■□□□□ 0.57
PTPRA-205ENST00000399903 ZNF570Q96NI8 536 aa18.59■□□□□ 0.57
PTPRA-205ENST00000399903 NFS1Q9Y697 457 aa18.59■□□□□ 0.57
PTPRA-205ENST00000399903 IRS2Q9Y4H2 1338 aa18.59■□□□□ 0.57
PTPRA-205ENST00000399903 KIF3CO14782 793 aa18.59■□□□□ 0.57
PTPRA-205ENST00000399903 PDHA1P08559 390 aa18.59■□□□□ 0.57
PTPRA-205ENST00000399903 TXKP42681 527 aa18.59■□□□□ 0.57
PTPRA-205ENST00000399903 SOGA3Q5TF21 947 aa18.59■□□□□ 0.57
PTPRA-205ENST00000399903 SPTY2D1Q68D10 685 aaPredicted RBP18.59■□□□□ 0.57
PTPRA-205ENST00000399903 OTUD6AQ7L8S5 288 aa18.59■□□□□ 0.57
PTPRA-205ENST00000399903 AZI2Q9H6S1 392 aa18.59■□□□□ 0.57
PTPRA-205ENST00000399903 TRIM33Q9UPN9 1127 aa18.59■□□□□ 0.57
PTPRA-205ENST00000399903 NOC2LQ9Y3T9 749 aaKnown RBP18.59■□□□□ 0.57
PTPRA-205ENST00000399903 LAMB2P55268 1798 aa18.58■□□□□ 0.57
PTPRA-205ENST00000399903 ALDH5A1P51649 535 aaPredicted RBP18.58■□□□□ 0.57
PTPRA-205ENST00000399903 ADCY1Q08828 1119 aa18.58■□□□□ 0.57
PTPRA-205ENST00000399903 MEI1Q5TIA1 1274 aa18.58■□□□□ 0.57
PTPRA-205ENST00000399903 CNNM4Q6P4Q7 775 aa18.58■□□□□ 0.57
PTPRA-205ENST00000399903 TRPM8Q7Z2W7 1104 aa18.58■□□□□ 0.57
PTPRA-205ENST00000399903 SH3GL3Q99963 347 aa18.58■□□□□ 0.57
PTPRA-205ENST00000399903 ECT2Q9H8V3 914 aa18.58■□□□□ 0.57
PTPRA-205ENST00000399903 KBTBD4Q9NVX7 518 aa18.58■□□□□ 0.57
PTPRA-205ENST00000399903 RAD21O60216 631 aa18.58■□□□□ 0.56
PTPRA-205ENST00000399903 PLTPP55058 493 aa18.58■□□□□ 0.56
PTPRA-205ENST00000399903 SLC17A8Q8NDX2 589 aa18.58■□□□□ 0.56
PTPRA-205ENST00000399903 BAP1Q92560 729 aa18.58■□□□□ 0.56
PTPRA-205ENST00000399903 GRIK3Q13003 919 aa18.57■□□□□ 0.56
PTPRA-205ENST00000399903 MKRN4PQ13434 485 aaPredicted RBP18.57■□□□□ 0.56
PTPRA-205ENST00000399903 CUL1Q13616 776 aa18.57■□□□□ 0.56
PTPRA-205ENST00000399903 TAF11Q15544 211 aa18.57■□□□□ 0.56
PTPRA-205ENST00000399903 NAB2Q15742 525 aa18.57■□□□□ 0.56
PTPRA-205ENST00000399903 SLC35G1Q2M3R5 365 aa18.57■□□□□ 0.56
PTPRA-205ENST00000399903 LACTB2Q53H82 288 aaPredicted RBP18.57■□□□□ 0.56
PTPRA-205ENST00000399903 ARL6IP4Q66PJ3 421 aaKnown RBP18.57■□□□□ 0.56
PTPRA-205ENST00000399903 UTP11Q9Y3A2 253 aaKnown RBP18.57■□□□□ 0.56
PTPRA-205ENST00000399903 SPATA31A6Q5VVP1 1343 aa18.57■□□□□ 0.56
PTPRA-205ENST00000399903 IFI35P80217 286 aaPredicted RBP18.57■□□□□ 0.56
PTPRA-205ENST00000399903 MTMR3Q13615 1198 aa18.57■□□□□ 0.56
PTPRA-205ENST00000399903 USP17L2Q6R6M4 530 aa18.57■□□□□ 0.56
PTPRA-205ENST00000399903 PEX26Q7Z412 305 aa18.57■□□□□ 0.56
PTPRA-205ENST00000399903 CCDC25Q86WR0 208 aa18.57■□□□□ 0.56
PTPRA-205ENST00000399903 TBC1D16Q8TBP0 767 aa18.57■□□□□ 0.56
PTPRA-205ENST00000399903 LBHD1Q9BQE6 289 aaPredicted RBP18.57■□□□□ 0.56
PTPRA-205ENST00000399903 SPDYE3A6NKU9 549 aa18.57■□□□□ 0.56
PTPRA-205ENST00000399903 RGS16O15492 202 aaPredicted RBP18.57■□□□□ 0.56
PTPRA-205ENST00000399903 BAG3O95817 575 aa18.57■□□□□ 0.56
PTPRA-205ENST00000399903 ECHS1P30084 290 aa18.57■□□□□ 0.56
PTPRA-205ENST00000399903 TRAPPC10P48553 1259 aa18.57■□□□□ 0.56
PTPRA-205ENST00000399903 FIGNQ5HY92 759 aa18.57■□□□□ 0.56
PTPRA-205ENST00000399903 MAGEC3Q8TD91 643 aa18.57■□□□□ 0.56
PTPRA-205ENST00000399903 KCNQ5Q9NR82 932 aa18.57■□□□□ 0.56
PTPRA-205ENST00000399903 PGRMC1O00264 195 aaKnown RBP18.56■□□□□ 0.56
PTPRA-205ENST00000399903 TLR2O60603 784 aa18.56■□□□□ 0.56
Retrieved 100 of 20,778 RNA–protein pairs in 15.6 ms