RNA–Protein interactions for RNA: ENST00000399438.7

TRAPPC13-202, Transcript of trafficking protein particle complex 13, humanhuman

APPRIS ALT1 TSL 2 BASIC

Gene TRAPPC13, Length 3,221 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC13-202ENST00000399438 RHDQ02161 417 aa6.9□□□□□ -1.3
TRAPPC13-202ENST00000399438 SCRN1Q12765 414 aa6.9□□□□□ -1.3
TRAPPC13-202ENST00000399438 FOXB2Q5VYV0 432 aa6.9□□□□□ -1.3
TRAPPC13-202ENST00000399438 C4orf50Q6ZRC1 276 aa6.9□□□□□ -1.3
TRAPPC13-202ENST00000399438 FAM184AQ8NB25 1140 aa6.9□□□□□ -1.3
TRAPPC13-202ENST00000399438 MSANTD4Q8NCY6 345 aa6.9□□□□□ -1.3
TRAPPC13-202ENST00000399438 MNS1Q8NEH6 495 aa6.9□□□□□ -1.3
TRAPPC13-202ENST00000399438 GSDMBQ8TAX9 411 aa6.9□□□□□ -1.3
TRAPPC13-202ENST00000399438 FNIP1Q8TF40 1166 aa6.9□□□□□ -1.3
TRAPPC13-202ENST00000399438 PIGBQ92521 554 aa6.9□□□□□ -1.3
TRAPPC13-202ENST00000399438 OSBP2Q969R2 916 aa6.9□□□□□ -1.3
TRAPPC13-202ENST00000399438 ZNF669Q96BR6 464 aaPredicted RBP6.9□□□□□ -1.3
TRAPPC13-202ENST00000399438 ALPK1Q96QP1 1244 aa6.9□□□□□ -1.3
TRAPPC13-202ENST00000399438 PPP1R9BQ96SB3 815 aa6.9□□□□□ -1.3
TRAPPC13-202ENST00000399438 ZMAT5Q9UDW3 170 aaKnown RBP6.9□□□□□ -1.3
TRAPPC13-202ENST00000399438 PCDHB3Q9Y5E6 796 aa6.9□□□□□ -1.3
TRAPPC13-202ENST00000399438 PCDH11XQ9BZA7 1347 aa6.9□□□□□ -1.3
TRAPPC13-202ENST00000399438 PCDH11YQ9BZA8 1340 aa6.9□□□□□ -1.3
TRAPPC13-202ENST00000399438 PPEF1O14829 653 aaPredicted RBP6.9□□□□□ -1.31
TRAPPC13-202ENST00000399438 P4HA2O15460 535 aa6.9□□□□□ -1.31
TRAPPC13-202ENST00000399438 B3GALNT1O75752 331 aa6.9□□□□□ -1.31
TRAPPC13-202ENST00000399438 APBB3O95704 486 aa6.9□□□□□ -1.31
TRAPPC13-202ENST00000399438 CYP17A1P05093 508 aa6.9□□□□□ -1.31
TRAPPC13-202ENST00000399438 STAT1P42224 750 aa6.9□□□□□ -1.31
TRAPPC13-202ENST00000399438 PPP2R5DQ14738 602 aa6.9□□□□□ -1.31
TRAPPC13-202ENST00000399438 ZNF772Q68DY9 489 aaPredicted RBP6.9□□□□□ -1.31
TRAPPC13-202ENST00000399438 BICDL1Q6ZP65 573 aa6.9□□□□□ -1.31
TRAPPC13-202ENST00000399438 BTN2A1Q7KYR7 527 aa6.9□□□□□ -1.31
TRAPPC13-202ENST00000399438 NLRP14Q86W24 1093 aa6.9□□□□□ -1.31
TRAPPC13-202ENST00000399438 FCHSD1Q86WN1 690 aa6.9□□□□□ -1.31
TRAPPC13-202ENST00000399438 PLBD2Q8NHP8 589 aa6.9□□□□□ -1.31
TRAPPC13-202ENST00000399438 SPATA18Q8TC71 538 aa6.9□□□□□ -1.31
TRAPPC13-202ENST00000399438 DDX1Q92499 740 aaKnown RBP6.9□□□□□ -1.31
TRAPPC13-202ENST00000399438 RADILQ96JH8 1075 aa6.9□□□□□ -1.31
TRAPPC13-202ENST00000399438 LSM14BQ9BX40 385 aaKnown RBP6.9□□□□□ -1.31
TRAPPC13-202ENST00000399438 MYLK2Q9H1R3 596 aa6.9□□□□□ -1.31
TRAPPC13-202ENST00000399438 GREM2Q9H772 168 aa6.9□□□□□ -1.31
TRAPPC13-202ENST00000399438 SENP2Q9HC62 589 aa6.9□□□□□ -1.31
TRAPPC13-202ENST00000399438 TMOD3Q9NYL9 352 aa6.9□□□□□ -1.31
TRAPPC13-202ENST00000399438 DNM3Q9UQ16 869 aa6.9□□□□□ -1.31
TRAPPC13-202ENST00000399438 ANKRD6Q9Y2G4 727 aa6.9□□□□□ -1.31
TRAPPC13-202ENST00000399438 HEG1Q9ULI3 1381 aa6.9□□□□□ -1.31
TRAPPC13-202ENST00000399438 PLOD2O00469 737 aa6.89□□□□□ -1.31
TRAPPC13-202ENST00000399438 SPTLC2O15270 562 aa6.89□□□□□ -1.31
TRAPPC13-202ENST00000399438 F12P00748 615 aaPredicted RBP6.89□□□□□ -1.31
TRAPPC13-202ENST00000399438 DESP17661 470 aa6.89□□□□□ -1.31
TRAPPC13-202ENST00000399438 ATP6V1E1P36543 226 aa6.89□□□□□ -1.31
TRAPPC13-202ENST00000399438 PRPHP41219 470 aa6.89□□□□□ -1.31
TRAPPC13-202ENST00000399438 ODF1Q14990 250 aa6.89□□□□□ -1.31
TRAPPC13-202ENST00000399438 SEPT7Q16181 437 aaKnown RBP6.89□□□□□ -1.31
TRAPPC13-202ENST00000399438 CCDC57Q2TAC2 916 aa6.89□□□□□ -1.31
TRAPPC13-202ENST00000399438 PKN3Q6P5Z2 889 aa6.89□□□□□ -1.31
TRAPPC13-202ENST00000399438 B3GNT9Q6UX72 402 aa6.89□□□□□ -1.31
TRAPPC13-202ENST00000399438 MFSD6Q6ZSS7 791 aa6.89□□□□□ -1.31
TRAPPC13-202ENST00000399438 CMTR1Q8N1G2 835 aaKnown RBP6.89□□□□□ -1.31
TRAPPC13-202ENST00000399438 C1orf74Q96LT6 269 aa6.89□□□□□ -1.31
TRAPPC13-202ENST00000399438 UNC45AQ9H3U1 944 aa6.89□□□□□ -1.31
TRAPPC13-202ENST00000399438 SMOC1Q9H4F8 434 aa6.89□□□□□ -1.31
TRAPPC13-202ENST00000399438 TOMM22Q9NS69 142 aa6.89□□□□□ -1.31
TRAPPC13-202ENST00000399438 ZBTB1Q9Y2K1 713 aa6.89□□□□□ -1.31
TRAPPC13-202ENST00000399438 B4E171 279 aa6.89□□□□□ -1.31
TRAPPC13-202ENST00000399438 F8W031 263 aaPredicted RBP6.89□□□□□ -1.31
TRAPPC13-202ENST00000399438 BIN1O00499 593 aa6.89□□□□□ -1.31
TRAPPC13-202ENST00000399438 MUSKO15146 869 aa6.89□□□□□ -1.31
TRAPPC13-202ENST00000399438 MSL3P1P0C860 447 aa6.89□□□□□ -1.31
TRAPPC13-202ENST00000399438 SCNN1DP51172 638 aa6.89□□□□□ -1.31
TRAPPC13-202ENST00000399438 LRMPQ12912 555 aa6.89□□□□□ -1.31
TRAPPC13-202ENST00000399438 PCBP1Q15365 356 aaKnown RBP eCLIP6.89□□□□□ -1.31
TRAPPC13-202ENST00000399438 MUM1Q2TAK8 710 aa6.89□□□□□ -1.31
TRAPPC13-202ENST00000399438 HSP90AA4PQ58FG1 418 aa6.89□□□□□ -1.31
TRAPPC13-202ENST00000399438 TTC39AQ5SRH9 613 aa6.89□□□□□ -1.31
TRAPPC13-202ENST00000399438 CCDC183Q5T5S1 534 aa6.89□□□□□ -1.31
TRAPPC13-202ENST00000399438 DESI1Q6ICB0 168 aa6.89□□□□□ -1.31
TRAPPC13-202ENST00000399438 USP51Q70EK9 711 aa6.89□□□□□ -1.31
TRAPPC13-202ENST00000399438 GALNT12Q8IXK2 581 aa6.89□□□□□ -1.31
TRAPPC13-202ENST00000399438 KISS1RQ969F8 398 aaPredicted RBP6.89□□□□□ -1.31
TRAPPC13-202ENST00000399438 ADAM33Q9BZ11 813 aa6.89□□□□□ -1.31
TRAPPC13-202ENST00000399438 GGA3Q9NZ52 723 aa6.89□□□□□ -1.31
TRAPPC13-202ENST00000399438 MAST3O60307 1309 aa6.89□□□□□ -1.31
TRAPPC13-202ENST00000399438 LRRC10BA6NIK2 292 aa6.89□□□□□ -1.31
TRAPPC13-202ENST00000399438 C2orf81A6NN90 581 aa6.89□□□□□ -1.31
TRAPPC13-202ENST00000399438 AKR1B1P15121 316 aa6.89□□□□□ -1.31
TRAPPC13-202ENST00000399438 CYP2C19P33261 490 aa6.89□□□□□ -1.31
TRAPPC13-202ENST00000399438 TPD52P55327 224 aaPredicted RBP6.89□□□□□ -1.31
TRAPPC13-202ENST00000399438 EIF6P56537 245 aaKnown RBP6.89□□□□□ -1.31
TRAPPC13-202ENST00000399438 UBE2HP62256 183 aa6.89□□□□□ -1.31
TRAPPC13-202ENST00000399438 ARID5BQ14865 1188 aa6.89□□□□□ -1.31
TRAPPC13-202ENST00000399438 MEA1Q16626 185 aa6.89□□□□□ -1.31
TRAPPC13-202ENST00000399438 FAM98CQ17RN3 349 aaKnown RBP6.89□□□□□ -1.31
TRAPPC13-202ENST00000399438 INF2Q27J81 1249 aa6.89□□□□□ -1.31
TRAPPC13-202ENST00000399438 MCMDC2Q4G0Z9 681 aa6.89□□□□□ -1.31
TRAPPC13-202ENST00000399438 VWA3BQ502W6 1294 aa6.89□□□□□ -1.31
TRAPPC13-202ENST00000399438 ANKRD39Q53RE8 183 aa6.89□□□□□ -1.31
TRAPPC13-202ENST00000399438 RRP12Q5JTH9 1297 aaKnown RBP6.89□□□□□ -1.31
TRAPPC13-202ENST00000399438 METTL24Q5JXM2 366 aa6.89□□□□□ -1.31
TRAPPC13-202ENST00000399438 NEK10Q6ZWH5 1172 aa6.89□□□□□ -1.31
TRAPPC13-202ENST00000399438 SLITRK4Q8IW52 837 aa6.89□□□□□ -1.31
TRAPPC13-202ENST00000399438 ZNF606Q8WXB4 792 aa6.89□□□□□ -1.31
TRAPPC13-202ENST00000399438 ASIC4Q96FT7 647 aa6.89□□□□□ -1.31
TRAPPC13-202ENST00000399438 XAGE2Q96GT9 111 aa6.89□□□□□ -1.31
Retrieved 100 of 20,778 RNA–protein pairs in 24.7 ms