RNA–Protein interactions for RNA: ENST00000399256.4

APOB-202, Transcript of apolipoprotein B, humanhuman

TSL 1 (best) BASIC

Gene APOB, Length 3,128 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APOB-202ENST00000399256 MSL1Q68DK7 614 aa15.26■□□□□ 0.03
APOB-202ENST00000399256 KRT27Q7Z3Y8 459 aa15.26■□□□□ 0.03
APOB-202ENST00000399256 CCDC50Q8IVM0 306 aa15.26■□□□□ 0.03
APOB-202ENST00000399256 LINC00116Q8NCU8 138 aa15.26■□□□□ 0.03
APOB-202ENST00000399256 TGFBRAP1Q8WUH2 860 aa15.26■□□□□ 0.03
APOB-202ENST00000399256 RAB34Q9BZG1 259 aa15.26■□□□□ 0.03
APOB-202ENST00000399256 EDIL3O43854 480 aa15.26■□□□□ 0.03
APOB-202ENST00000399256 RASA1P20936 1047 aa15.26■□□□□ 0.03
APOB-202ENST00000399256 KCNH2Q12809 1159 aa15.26■□□□□ 0.03
APOB-202ENST00000399256 XRCC4Q13426 336 aa15.26■□□□□ 0.03
APOB-202ENST00000399256 BICDL1Q6ZP65 573 aa15.26■□□□□ 0.03
APOB-202ENST00000399256 IRF2BP2Q7Z5L9 587 aa15.26■□□□□ 0.03
APOB-202ENST00000399256 TPCN2Q8NHX9 752 aa15.26■□□□□ 0.03
APOB-202ENST00000399256 MIEF2Q96C03 454 aa15.26■□□□□ 0.03
APOB-202ENST00000399256 TBC1D31Q96DN5 1066 aa15.26■□□□□ 0.03
APOB-202ENST00000399256 CALR3Q96L12 384 aaKnown RBP15.26■□□□□ 0.03
APOB-202ENST00000399256 CEP63Q96MT8 703 aa15.26■□□□□ 0.03
APOB-202ENST00000399256 BHMG1C9JSJ3 638 aaPredicted RBP15.26■□□□□ 0.03
APOB-202ENST00000399256 CTNND1O60716 968 aaKnown RBP15.26■□□□□ 0.03
APOB-202ENST00000399256 RPSAP08865 295 aaKnown RBP15.26■□□□□ 0.03
APOB-202ENST00000399256 DIXDC1Q155Q3 683 aa15.26■□□□□ 0.03
APOB-202ENST00000399256 ALKBH5Q6P6C2 394 aaKnown RBP15.26■□□□□ 0.03
APOB-202ENST00000399256 TXNRD3Q86VQ6 643 aa15.26■□□□□ 0.03
APOB-202ENST00000399256 MAPKAPK5Q8IW41 473 aa15.26■□□□□ 0.03
APOB-202ENST00000399256 KIRREL3Q8IZU9 778 aa15.26■□□□□ 0.03
APOB-202ENST00000399256 LRRC27Q9C0I9 530 aa15.26■□□□□ 0.03
APOB-202ENST00000399256 ZHX3Q9H4I2 956 aa15.26■□□□□ 0.03
APOB-202ENST00000399256 NAGPAQ9UK23 515 aa15.26■□□□□ 0.03
APOB-202ENST00000399256 CAND2O75155 1236 aa15.25■□□□□ 0.03
APOB-202ENST00000399256 ZBTB48P10074 688 aaPredicted RBP15.25■□□□□ 0.03
APOB-202ENST00000399256 TNNI2P48788 182 aa15.25■□□□□ 0.03
APOB-202ENST00000399256 KCNQ4P56696 695 aa15.25■□□□□ 0.03
APOB-202ENST00000399256 ADAM9Q13443 819 aa15.25■□□□□ 0.03
APOB-202ENST00000399256 DHX37Q8IY37 1157 aaKnown RBP15.25■□□□□ 0.03
APOB-202ENST00000399256 CHMP6Q96FZ7 201 aa15.25■□□□□ 0.03
APOB-202ENST00000399256 XPO6Q96QU8 1125 aaKnown RBP15.25■□□□□ 0.03
APOB-202ENST00000399256 FRMPD2Q68DX3 1309 aaPredicted RBP15.25■□□□□ 0.03
APOB-202ENST00000399256 BTNL10A8MVZ5 291 aa15.25■□□□□ 0.03
APOB-202ENST00000399256 PPP1R12BO60237 982 aaPredicted RBP15.25■□□□□ 0.03
APOB-202ENST00000399256 PPP1R7Q15435 360 aa15.25■□□□□ 0.03
APOB-202ENST00000399256 IFI16Q16666 785 aaKnown RBP15.25■□□□□ 0.03
APOB-202ENST00000399256 HIBCHQ6NVY1 386 aaPredicted RBP15.25■□□□□ 0.03
APOB-202ENST00000399256 ADAT2Q7Z6V5 191 aaKnown RBP15.25■□□□□ 0.03
APOB-202ENST00000399256 SELENOSQ9BQE4 189 aa15.25■□□□□ 0.03
APOB-202ENST00000399256 BAIAP2L1Q9UHR4 511 aa15.25■□□□□ 0.03
APOB-202ENST00000399256 SMIM23A6NLE4 172 aa15.24■□□□□ 0.03
APOB-202ENST00000399256 E9PMD0 336 aa15.24■□□□□ 0.03
APOB-202ENST00000399256 CCDC188H7C350 402 aa15.24■□□□□ 0.03
APOB-202ENST00000399256 GNA14O95837 355 aa15.24■□□□□ 0.03
APOB-202ENST00000399256 ELF3P78545 371 aaPredicted RBP15.24■□□□□ 0.03
APOB-202ENST00000399256 ARMC9Q7Z3E5 817 aa15.24■□□□□ 0.03
APOB-202ENST00000399256 DAAM2Q86T65 1068 aa15.24■□□□□ 0.03
APOB-202ENST00000399256 CCDC26Q8TAB7 109 aa15.24■□□□□ 0.03
APOB-202ENST00000399256 GOPCQ9HD26 462 aa15.24■□□□□ 0.03
APOB-202ENST00000399256 UTP11Q9Y3A2 253 aaKnown RBP15.24■□□□□ 0.03
APOB-202ENST00000399256 TRIM37O94972 964 aa15.24■□□□□ 0.03
APOB-202ENST00000399256 SHBGP04278 402 aa15.24■□□□□ 0.03
APOB-202ENST00000399256 GCFC2P16383 781 aaKnown RBP15.24■□□□□ 0.03
APOB-202ENST00000399256 COPB2P35606 906 aa15.24■□□□□ 0.03
APOB-202ENST00000399256 CLNS1AP54105 237 aaKnown RBP15.24■□□□□ 0.03
APOB-202ENST00000399256 HERC4Q5GLZ8 1057 aaPredicted RBP15.24■□□□□ 0.03
APOB-202ENST00000399256 KDM4CQ9H3R0 1056 aa15.24■□□□□ 0.03
APOB-202ENST00000399256 HDAC9Q9UKV0 1011 aa15.24■□□□□ 0.03
APOB-202ENST00000399256 MYH7BA7E2Y1 1941 aa15.24■□□□□ 0.03
APOB-202ENST00000399256 TAF1LQ8IZX4 1826 aa15.24■□□□□ 0.03
APOB-202ENST00000399256 USP17L5A8MUK1 530 aa15.23■□□□□ 0.03
APOB-202ENST00000399256 MARCH6O60337 910 aa15.23■□□□□ 0.03
APOB-202ENST00000399256 DNAJC8O75937 253 aaPredicted RBP15.23■□□□□ 0.03
APOB-202ENST00000399256 ORC2Q13416 577 aaPredicted RBP15.23■□□□□ 0.03
APOB-202ENST00000399256 PDIA5Q14554 519 aa15.23■□□□□ 0.03
APOB-202ENST00000399256 ERMARDQ5T6L9 678 aa15.23■□□□□ 0.03
APOB-202ENST00000399256 FAM196AQ6ZSG2 479 aa15.23■□□□□ 0.03
APOB-202ENST00000399256 CCDC197Q8NCU1 140 aa15.23■□□□□ 0.03
APOB-202ENST00000399256 RBM46Q8TBY0 533 aaKnown RBP15.23■□□□□ 0.03
APOB-202ENST00000399256 SCFD1Q8WVM8 642 aa15.23■□□□□ 0.03
APOB-202ENST00000399256 EYA3Q99504 573 aa15.23■□□□□ 0.03
APOB-202ENST00000399256 FAM129AQ9BZQ8 928 aa15.23■□□□□ 0.03
APOB-202ENST00000399256 SLITRK6Q9H5Y7 841 aa15.23■□□□□ 0.03
APOB-202ENST00000399256 SWAP70Q9UH65 585 aa15.23■□□□□ 0.03
APOB-202ENST00000399256 NR2E1Q9Y466 385 aa15.23■□□□□ 0.03
APOB-202ENST00000399256 TLDC2A0PJX2 215 aa15.23■□□□□ 0.03
APOB-202ENST00000399256 CCT8L1PA6NM43 557 aa15.23■□□□□ 0.03
APOB-202ENST00000399256 MGRN1O60291 552 aa15.23■□□□□ 0.03
APOB-202ENST00000399256 ATP6V1G2O95670 118 aa15.23■□□□□ 0.03
APOB-202ENST00000399256 UCHL3P15374 230 aa15.23■□□□□ 0.03
APOB-202ENST00000399256 CHN1P15882 459 aa15.23■□□□□ 0.03
APOB-202ENST00000399256 ADCY7P51828 1080 aa15.23■□□□□ 0.03
APOB-202ENST00000399256 SF3B3Q15393 1217 aaKnown RBP15.23■□□□□ 0.03
APOB-202ENST00000399256 UBE2SQ16763 222 aa15.23■□□□□ 0.03
APOB-202ENST00000399256 ACCSLQ4AC99 568 aa15.23■□□□□ 0.03
APOB-202ENST00000399256 C10orf76Q5T2E6 689 aa15.23■□□□□ 0.03
APOB-202ENST00000399256 TLCD1Q96CP7 247 aa15.23■□□□□ 0.03
APOB-202ENST00000399256 BMP2KQ9NSY1 1161 aaPredicted RBP15.23■□□□□ 0.03
APOB-202ENST00000399256 FGGP02679 453 aa15.23■□□□□ 0.03
APOB-202ENST00000399256 PRPF4BQ13523 1007 aaKnown RBP15.23■□□□□ 0.03
APOB-202ENST00000399256 FOXR2Q6PJQ5 311 aa15.23■□□□□ 0.03
APOB-202ENST00000399256 MAGEC3Q8TD91 643 aa15.23■□□□□ 0.03
APOB-202ENST00000399256 FMO2Q99518 471 aa15.23■□□□□ 0.03
APOB-202ENST00000399256 KCTD10Q9H3F6 313 aa15.23■□□□□ 0.03
APOB-202ENST00000399256 NOD2Q9HC29 1040 aa15.23■□□□□ 0.03
Retrieved 100 of 20,778 RNA–protein pairs in 15.2 ms