RNA–Protein interactions for RNA: ENST00000398969.7

COL13A1-203, Transcript of collagen type XIII alpha 1 chain, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene COL13A1, Length 2,267 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL13A1-203ENST00000398969 GNGT1P63211 74 aa28.03■■■□□ 2.08
COL13A1-203ENST00000398969 ARHGAP4P98171 946 aa28.03■■■□□ 2.08
COL13A1-203ENST00000398969 NFIAQ12857 509 aa28.03■■■□□ 2.08
COL13A1-203ENST00000398969 AP3B2Q13367 1082 aa28.03■■■□□ 2.08
COL13A1-203ENST00000398969 C10orf76Q5T2E6 689 aa28.03■■■□□ 2.08
COL13A1-203ENST00000398969 STRIP1Q5VSL9 837 aa28.03■■■□□ 2.08
COL13A1-203ENST00000398969 APOBEC3HQ6NTF7 200 aaKnown RBP28.03■■■□□ 2.08
COL13A1-203ENST00000398969 ZNF571Q7Z3V5 609 aaPredicted RBP28.03■■■□□ 2.08
COL13A1-203ENST00000398969 DEFB132Q7Z7B7 95 aa28.03■■■□□ 2.08
COL13A1-203ENST00000398969 IQCKQ8N0W5 287 aa28.03■■■□□ 2.08
COL13A1-203ENST00000398969 CCDC43Q96MW1 224 aaKnown RBP28.03■■■□□ 2.08
COL13A1-203ENST00000398969 DNAJC18Q9H819 358 aa28.03■■■□□ 2.08
COL13A1-203ENST00000398969 ANKRD65E5RJM6 399 aa28.02■■■□□ 2.08
COL13A1-203ENST00000398969 CLSTN1O94985 981 aa28.02■■■□□ 2.08
COL13A1-203ENST00000398969 UCHL3P15374 230 aa28.02■■■□□ 2.08
COL13A1-203ENST00000398969 HOXD13P35453 343 aa28.02■■■□□ 2.08
COL13A1-203ENST00000398969 SKOR1P84550 965 aa28.02■■■□□ 2.08
COL13A1-203ENST00000398969 SF3B2Q13435 895 aaKnown RBP28.02■■■□□ 2.08
COL13A1-203ENST00000398969 KNOP1Q1ED39 458 aaKnown RBP28.02■■■□□ 2.08
COL13A1-203ENST00000398969 SKIDA1Q1XH10 827 aa28.02■■■□□ 2.08
COL13A1-203ENST00000398969 EPM2AIP1Q7L775 607 aaPredicted RBP28.02■■■□□ 2.08
COL13A1-203ENST00000398969 SFR1Q86XK3 245 aa28.02■■■□□ 2.08
COL13A1-203ENST00000398969 USP38Q8NB14 1042 aa28.02■■■□□ 2.08
COL13A1-203ENST00000398969 CASKIN2Q8WXE0 1202 aa28.02■■■□□ 2.08
COL13A1-203ENST00000398969 P2RX7Q99572 595 aaKnown RBP28.02■■■□□ 2.08
COL13A1-203ENST00000398969 REEP2Q9BRK0 252 aa28.02■■■□□ 2.08
COL13A1-203ENST00000398969 KIF13BQ9NQT8 1826 aa28.02■■■□□ 2.08
COL13A1-203ENST00000398969 AFPP02771 609 aaKnown RBP28.02■■■□□ 2.08
COL13A1-203ENST00000398969 PABPC4Q13310 644 aaKnown RBP eCLIP28.02■■■□□ 2.08
COL13A1-203ENST00000398969 PRR16Q569H4 304 aa28.02■■■□□ 2.08
COL13A1-203ENST00000398969 MREGQ8N565 214 aa28.02■■■□□ 2.08
COL13A1-203ENST00000398969 DCAF4Q8WV16 495 aa28.02■■■□□ 2.08
COL13A1-203ENST00000398969 MEIS1O00470 390 aa28.01■■■□□ 2.07
COL13A1-203ENST00000398969 SPATA31C1P0DKV0 1188 aa28.01■■■□□ 2.07
COL13A1-203ENST00000398969 EEF2P13639 858 aaKnown RBP28.01■■■□□ 2.07
COL13A1-203ENST00000398969 RNASE9P60153 205 aaKnown RBP28.01■■■□□ 2.07
COL13A1-203ENST00000398969 ZFPM1Q8IX07 1006 aa28.01■■■□□ 2.07
COL13A1-203ENST00000398969 SYT2Q8N9I0 419 aaPredicted RBP28.01■■■□□ 2.07
COL13A1-203ENST00000398969 ERMNQ8TAM6 284 aa28.01■■■□□ 2.07
COL13A1-203ENST00000398969 SPAG5Q96R06 1193 aa28.01■■■□□ 2.07
COL13A1-203ENST00000398969 TMEM59LQ9UK28 342 aa28.01■■■□□ 2.07
COL13A1-203ENST00000398969 CES2O00748 559 aa28.01■■■□□ 2.07
COL13A1-203ENST00000398969 FKBP1AP62942 108 aaKnown RBP28.01■■■□□ 2.07
COL13A1-203ENST00000398969 CFAP58Q5T655 872 aa28.01■■■□□ 2.07
COL13A1-203ENST00000398969 TAF4BQ92750 862 aa28.01■■■□□ 2.07
COL13A1-203ENST00000398969 MKL1Q969V6 931 aa28.01■■■□□ 2.07
COL13A1-203ENST00000398969 DNM3Q9UQ16 869 aa28.01■■■□□ 2.07
COL13A1-203ENST00000398969 BZW2Q9Y6E2 419 aaKnown RBP28.01■■■□□ 2.07
COL13A1-203ENST00000398969 SCN9AQ15858 1988 aa28■■■□□ 2.07
COL13A1-203ENST00000398969 KRT14P02533 472 aa28■■■□□ 2.07
COL13A1-203ENST00000398969 PON1P27169 355 aa28■■■□□ 2.07
COL13A1-203ENST00000398969 RPA1P27694 616 aa28■■■□□ 2.07
COL13A1-203ENST00000398969 CRKP46108 304 aa28■■■□□ 2.07
COL13A1-203ENST00000398969 CCT5P48643 541 aa28■■■□□ 2.07
COL13A1-203ENST00000398969 TNNC1P63316 161 aa28■■■□□ 2.07
COL13A1-203ENST00000398969 RPS6KA1Q15418 735 aa28■■■□□ 2.07
COL13A1-203ENST00000398969 SHROOM1Q2M3G4 852 aaPredicted RBP28■■■□□ 2.07
COL13A1-203ENST00000398969 DACT2Q5SW24 774 aa28■■■□□ 2.07
COL13A1-203ENST00000398969 SLFN13Q68D06 897 aa28■■■□□ 2.07
COL13A1-203ENST00000398969 TBX3O15119 743 aa27.99■■■□□ 2.07
COL13A1-203ENST00000398969 EXOC3L4Q17RC7 722 aa27.99■■■□□ 2.07
COL13A1-203ENST00000398969 Q4G0T1 1027 aa27.99■■■□□ 2.07
COL13A1-203ENST00000398969 CC2D2BQ6DHV5 1058 aa27.99■■■□□ 2.07
COL13A1-203ENST00000398969 KIAA0825Q8IV33 1275 aa27.99■■■□□ 2.07
COL13A1-203ENST00000398969 LENG9Q96B70 501 aa27.99■■■□□ 2.07
COL13A1-203ENST00000398969 ZNF233A6NK53 670 aa27.99■■■□□ 2.07
COL13A1-203ENST00000398969 PDXKO00764 312 aa27.99■■■□□ 2.07
COL13A1-203ENST00000398969 RAD51CO43502 376 aa27.99■■■□□ 2.07
COL13A1-203ENST00000398969 MYBP10242 640 aa27.99■■■□□ 2.07
COL13A1-203ENST00000398969 XRCC5P13010 732 aaKnown RBP27.99■■■□□ 2.07
COL13A1-203ENST00000398969 GUCY2FP51841 1108 aa27.99■■■□□ 2.07
COL13A1-203ENST00000398969 AOC3Q16853 763 aa27.99■■■□□ 2.07
COL13A1-203ENST00000398969 BCAS4Q8TDM0 211 aa27.99■■■□□ 2.07
COL13A1-203ENST00000398969 PIK3R5Q8WYR1 880 aa27.99■■■□□ 2.07
COL13A1-203ENST00000398969 MRIQ9BWK5 157 aa27.99■■■□□ 2.07
COL13A1-203ENST00000398969 NAGPAQ9UK23 515 aa27.99■■■□□ 2.07
COL13A1-203ENST00000398969 GOLGB1Q14789 3259 aaKnown RBP27.98■■■□□ 2.07
COL13A1-203ENST00000398969 KCNK3O14649 394 aa27.98■■■□□ 2.07
COL13A1-203ENST00000398969 CALUO43852 315 aaPredicted RBP27.98■■■□□ 2.07
COL13A1-203ENST00000398969 KIF4AO95239 1232 aa27.98■■■□□ 2.07
COL13A1-203ENST00000398969 RBM46Q8TBY0 533 aaKnown RBP27.98■■■□□ 2.07
COL13A1-203ENST00000398969 WHAMMQ8TF30 809 aa27.98■■■□□ 2.07
COL13A1-203ENST00000398969 ZDHHC15Q96MV8 337 aa27.98■■■□□ 2.07
COL13A1-203ENST00000398969 AKAP3O75969 853 aa27.98■■■□□ 2.07
COL13A1-203ENST00000398969 EPHA7Q15375 998 aa27.98■■■□□ 2.07
COL13A1-203ENST00000398969 TRADDQ15628 312 aa27.98■■■□□ 2.07
COL13A1-203ENST00000398969 TTC19Q6DKK2 380 aaPredicted RBP27.98■■■□□ 2.07
COL13A1-203ENST00000398969 SH2D3CQ8N5H7 860 aa27.98■■■□□ 2.07
COL13A1-203ENST00000398969 NYAP2Q9P242 653 aa27.98■■■□□ 2.07
COL13A1-203ENST00000398969 FAM196BA6NMK8 535 aa27.97■■■□□ 2.07
COL13A1-203ENST00000398969 PRKCIP41743 596 aa27.97■■■□□ 2.07
COL13A1-203ENST00000398969 KLHL7Q8IXQ5 586 aa27.97■■■□□ 2.07
COL13A1-203ENST00000398969 LRRC57Q8N9N7 239 aa27.97■■■□□ 2.07
COL13A1-203ENST00000398969 BBXQ8WY36 941 aaPredicted RBP27.97■■■□□ 2.07
COL13A1-203ENST00000398969 DCAF17Q5H9S7 520 aaPredicted RBP27.97■■■□□ 2.07
COL13A1-203ENST00000398969 KCTD16Q68DU8 428 aa27.97■■■□□ 2.07
COL13A1-203ENST00000398969 CD302Q8IX05 232 aa27.97■■■□□ 2.07
COL13A1-203ENST00000398969 A6NNZ2 444 aa27.96■■■□□ 2.07
COL13A1-203ENST00000398969 FAM86B1E9PN63 330 aa27.96■■■□□ 2.07
COL13A1-203ENST00000398969 FAM86B2P0C5J1 330 aa27.96■■■□□ 2.07
Retrieved 100 of 20,778 RNA–protein pairs in 15.5 ms