RNA–Protein interactions for RNA: ENST00000398729.1

VCX3A-202, Transcript of variable charge X-linked 3A, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene VCX3A, Length 808 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCX3A-202ENST00000398729 GJB5O95377 273 aa15.23■□□□□ 0.03
VCX3A-202ENST00000398729 DEXIO95424 95 aa15.23■□□□□ 0.03
VCX3A-202ENST00000398729 AMHP03971 560 aa15.23■□□□□ 0.03
VCX3A-202ENST00000398729 RPLP2P05387 115 aaKnown RBP15.23■□□□□ 0.03
VCX3A-202ENST00000398729 INSRRP14616 1297 aa15.23■□□□□ 0.03
VCX3A-202ENST00000398729 SLC26A2P50443 739 aa15.23■□□□□ 0.03
VCX3A-202ENST00000398729 NLRP5P59047 1200 aa15.23■□□□□ 0.03
VCX3A-202ENST00000398729 IGBP1P78318 339 aa15.23■□□□□ 0.03
VCX3A-202ENST00000398729 STK3Q13188 491 aa15.23■□□□□ 0.03
VCX3A-202ENST00000398729 RUFY4Q6ZNE9 571 aa15.23■□□□□ 0.03
VCX3A-202ENST00000398729 RASGRP4Q8TDF6 673 aa15.23■□□□□ 0.03
VCX3A-202ENST00000398729 APBB2Q92870 758 aa15.23■□□□□ 0.03
VCX3A-202ENST00000398729 RAD9AQ99638 391 aa15.23■□□□□ 0.03
VCX3A-202ENST00000398729 ZNF577Q9BSK1 485 aa15.23■□□□□ 0.03
VCX3A-202ENST00000398729 TCEAL9Q9UHQ7 104 aa15.23■□□□□ 0.03
VCX3A-202ENST00000398729 BACH1O14867 736 aa15.22■□□□□ 0.03
VCX3A-202ENST00000398729 EIF5BO60841 1220 aaKnown RBP15.22■□□□□ 0.03
VCX3A-202ENST00000398729 CCNE2O96020 404 aa15.22■□□□□ 0.03
VCX3A-202ENST00000398729 CHRNA1P02708 482 aa15.22■□□□□ 0.03
VCX3A-202ENST00000398729 CIITAP33076 1130 aa15.22■□□□□ 0.03
VCX3A-202ENST00000398729 ANAPC15P60006 121 aa15.22■□□□□ 0.03
VCX3A-202ENST00000398729 ERVK-21P61565 698 aa15.22■□□□□ 0.03
VCX3A-202ENST00000398729 PLCB4Q15147 1175 aa15.22■□□□□ 0.03
VCX3A-202ENST00000398729 MARCH8Q5T0T0 291 aa15.22■□□□□ 0.03
VCX3A-202ENST00000398729 FAM160B1Q5W0V3 765 aa15.22■□□□□ 0.03
VCX3A-202ENST00000398729 LIN28BQ6ZN17 250 aaKnown RBP eCLIP15.22■□□□□ 0.03
VCX3A-202ENST00000398729 FAM178BQ8IXR5 827 aa15.22■□□□□ 0.03
VCX3A-202ENST00000398729 MYOCDQ8IZQ8 938 aa15.22■□□□□ 0.03
VCX3A-202ENST00000398729 GADD45GIP1Q8TAE8 222 aaPredicted RBP15.22■□□□□ 0.03
VCX3A-202ENST00000398729 DNAJB3Q8WWF6 145 aa15.22■□□□□ 0.03
VCX3A-202ENST00000398729 IFIH1Q9BYX4 1025 aaKnown RBP15.22■□□□□ 0.03
VCX3A-202ENST00000398729 TBC1D22BQ9NU19 505 aa15.22■□□□□ 0.03
VCX3A-202ENST00000398729 MYO7AQ13402 2215 aa15.21■□□□□ 0.03
VCX3A-202ENST00000398729 IGKV6D-21A0A0A0MT36 114 aa15.21■□□□□ 0.03
VCX3A-202ENST00000398729 POTEB3A0JP26 581 aa15.21■□□□□ 0.03
VCX3A-202ENST00000398729 LINC01553A4QN01 128 aa15.21■□□□□ 0.03
VCX3A-202ENST00000398729 DHX15O43143 795 aaKnown RBP15.21■□□□□ 0.03
VCX3A-202ENST00000398729 MKRN4PQ13434 485 aaPredicted RBP15.21■□□□□ 0.03
VCX3A-202ENST00000398729 PRR16Q569H4 304 aa15.21■□□□□ 0.03
VCX3A-202ENST00000398729 MIS18BP1Q6P0N0 1132 aa15.21■□□□□ 0.03
VCX3A-202ENST00000398729 FAM117BQ6P1L5 589 aa15.21■□□□□ 0.03
VCX3A-202ENST00000398729 POTEBQ6S5H4 581 aa15.21■□□□□ 0.03
VCX3A-202ENST00000398729 ABHD15Q6UXT9 468 aa15.21■□□□□ 0.03
VCX3A-202ENST00000398729 FAM177A1Q8N128 213 aaPredicted RBP15.21■□□□□ 0.03
VCX3A-202ENST00000398729 C22orf23Q9BZE7 217 aa15.21■□□□□ 0.03
VCX3A-202ENST00000398729 OSBPL7Q9BZF2 842 aa15.21■□□□□ 0.03
VCX3A-202ENST00000398729 UBE2ZQ9H832 354 aaPredicted RBP15.21■□□□□ 0.03
VCX3A-202ENST00000398729 MTUS1Q9ULD2 1270 aa15.21■□□□□ 0.03
VCX3A-202ENST00000398729 INSL6Q9Y581 213 aa15.21■□□□□ 0.03
VCX3A-202ENST00000398729 HBP1O60381 514 aa15.2■□□□□ 0.02
VCX3A-202ENST00000398729 CDKL5O76039 1030 aa15.2■□□□□ 0.02
VCX3A-202ENST00000398729 GHRP10912 638 aa15.2■□□□□ 0.02
VCX3A-202ENST00000398729 USP11P51784 963 aa15.2■□□□□ 0.02
VCX3A-202ENST00000398729 MGAT3Q09327 533 aa15.2■□□□□ 0.02
VCX3A-202ENST00000398729 LEXMQ3ZCV2 418 aa15.2■□□□□ 0.02
VCX3A-202ENST00000398729 IER5Q5VY09 327 aa15.2■□□□□ 0.02
VCX3A-202ENST00000398729 ZNF746Q6NUN9 644 aaPredicted RBP15.2■□□□□ 0.02
VCX3A-202ENST00000398729 PDXDC2PQ6P474 469 aa15.2■□□□□ 0.02
VCX3A-202ENST00000398729 UIMC1Q96RL1 719 aa15.2■□□□□ 0.02
VCX3A-202ENST00000398729 TGS1Q96RS0 853 aaKnown RBP15.2■□□□□ 0.02
VCX3A-202ENST00000398729 FAM49AQ9H0Q0 323 aaPredicted RBP15.2■□□□□ 0.02
VCX3A-202ENST00000398729 SLKQ9H2G2 1235 aaPredicted RBP15.2■□□□□ 0.02
VCX3A-202ENST00000398729 ZNF302Q9NR11 478 aa15.2■□□□□ 0.02
VCX3A-202ENST00000398729 PCDHA4Q9UN74 947 aa15.2■□□□□ 0.02
VCX3A-202ENST00000398729 PCDHA2Q9Y5H9 948 aa15.2■□□□□ 0.02
VCX3A-202ENST00000398729 CDY2AQ9Y6F7 541 aa15.2■□□□□ 0.02
VCX3A-202ENST00000398729 C5orf42Q9H799 3197 aa15.2■□□□□ 0.02
VCX3A-202ENST00000398729 M0QZ92 97 aa15.19■□□□□ 0.02
VCX3A-202ENST00000398729 MRPS6P82932 125 aaKnown RBP15.19■□□□□ 0.02
VCX3A-202ENST00000398729 KRT76Q01546 638 aa15.19■□□□□ 0.02
VCX3A-202ENST00000398729 SCRN1Q12765 414 aa15.19■□□□□ 0.02
VCX3A-202ENST00000398729 ANKRD1Q15327 319 aa15.19■□□□□ 0.02
VCX3A-202ENST00000398729 GALNT17Q6IS24 598 aa15.19■□□□□ 0.02
VCX3A-202ENST00000398729 SWSAP1Q6NVH7 229 aa15.19■□□□□ 0.02
VCX3A-202ENST00000398729 ALYREFQ86V81 257 aaKnown RBP15.19■□□□□ 0.02
VCX3A-202ENST00000398729 CCDC60Q8IWA6 550 aaPredicted RBP15.19■□□□□ 0.02
VCX3A-202ENST00000398729 SMAP1Q8IYB5 467 aaPredicted RBP15.19■□□□□ 0.02
VCX3A-202ENST00000398729 BLIDQ8IZY5 108 aa15.19■□□□□ 0.02
VCX3A-202ENST00000398729 GJD3Q8N144 294 aa15.19■□□□□ 0.02
VCX3A-202ENST00000398729 ATP8B4Q8TF62 1192 aa15.19■□□□□ 0.02
VCX3A-202ENST00000398729 TRAPPC12Q8WVT3 735 aa15.19■□□□□ 0.02
VCX3A-202ENST00000398729 ZBTB10Q96DT7 871 aa15.19■□□□□ 0.02
VCX3A-202ENST00000398729 SIP14410 1827 aa15.19■□□□□ 0.02
VCX3A-202ENST00000398729 SMIM35A0A1B0GVV1 85 aa15.18■□□□□ 0.02
VCX3A-202ENST00000398729 LOC101059915A0A1B0GWI6 518 aaPredicted RBP15.18■□□□□ 0.02
VCX3A-202ENST00000398729 PSAPP07602 524 aa15.18■□□□□ 0.02
VCX3A-202ENST00000398729 HTRA4P83105 476 aaPredicted RBP15.18■□□□□ 0.02
VCX3A-202ENST00000398729 LPIN1Q14693 890 aa15.18■□□□□ 0.02
VCX3A-202ENST00000398729 FBXO47Q5MNV8 452 aa15.18■□□□□ 0.02
VCX3A-202ENST00000398729 MTHFD1LQ6UB35 978 aa15.18■□□□□ 0.02
VCX3A-202ENST00000398729 CKAP2LQ8IYA6 745 aa15.18■□□□□ 0.02
VCX3A-202ENST00000398729 DAGLBQ8NCG7 672 aa15.18■□□□□ 0.02
VCX3A-202ENST00000398729 TBCKQ8TEA7 893 aa15.18■□□□□ 0.02
VCX3A-202ENST00000398729 TOP1MTQ969P6 601 aa15.18■□□□□ 0.02
VCX3A-202ENST00000398729 LENG9Q96B70 501 aa15.18■□□□□ 0.02
VCX3A-202ENST00000398729 C17orf80Q9BSJ5 609 aa15.18■□□□□ 0.02
VCX3A-202ENST00000398729 TPCN1Q9ULQ1 816 aa15.18■□□□□ 0.02
VCX3A-202ENST00000398729 SAMM50Q9Y512 469 aa15.18■□□□□ 0.02
VCX3A-202ENST00000398729 PCDHA10Q9Y5I2 948 aa15.18■□□□□ 0.02
VCX3A-202ENST00000398729 TRPV2Q9Y5S1 764 aa15.18■□□□□ 0.02
Retrieved 100 of 20,778 RNA–protein pairs in 56.5 ms