RNA–Protein interactions for RNA: ENST00000397477.2

CPSF1P1-201, Transcript of cleavage and polyadenylation specific factor 1 pseudogene 1, humanhuman

BASIC

Gene CPSF1P1, Length 3,730 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF1P1-201ENST00000397477 MIER3Q7Z3K6 550 aa11.43□□□□□ -0.58
CPSF1P1-201ENST00000397477 DAAM2Q86T65 1068 aa11.43□□□□□ -0.58
CPSF1P1-201ENST00000397477 CHURC1Q8WUH1 139 aa11.43□□□□□ -0.58
CPSF1P1-201ENST00000397477 P2RX7Q99572 595 aaKnown RBP11.43□□□□□ -0.58
CPSF1P1-201ENST00000397477 RAVER2Q9HCJ3 691 aaKnown RBP11.43□□□□□ -0.58
CPSF1P1-201ENST00000397477 SALL4Q9UJQ4 1053 aa11.43□□□□□ -0.58
CPSF1P1-201ENST00000397477 AHDC1Q5TGY3 1603 aaPredicted RBP11.43□□□□□ -0.58
CPSF1P1-201ENST00000397477 TMEM150BA6NC51 233 aa11.43□□□□□ -0.58
CPSF1P1-201ENST00000397477 ZSCAN5CA6NGD5 496 aaPredicted RBP11.43□□□□□ -0.58
CPSF1P1-201ENST00000397477 EDIL3O43854 480 aa11.43□□□□□ -0.58
CPSF1P1-201ENST00000397477 AKAP3O75969 853 aa11.43□□□□□ -0.58
CPSF1P1-201ENST00000397477 MYBL2P10244 700 aa11.43□□□□□ -0.58
CPSF1P1-201ENST00000397477 GGCXP38435 758 aa11.43□□□□□ -0.58
CPSF1P1-201ENST00000397477 AP3B2Q13367 1082 aa11.43□□□□□ -0.58
CPSF1P1-201ENST00000397477 RRP1BQ14684 758 aaKnown RBP11.43□□□□□ -0.58
CPSF1P1-201ENST00000397477 ALKBH5Q6P6C2 394 aaKnown RBP11.43□□□□□ -0.58
CPSF1P1-201ENST00000397477 CEP89Q96ST8 783 aa11.43□□□□□ -0.58
CPSF1P1-201ENST00000397477 RBM12Q9NTZ6 932 aaKnown RBP11.43□□□□□ -0.58
CPSF1P1-201ENST00000397477 CEP72Q9P209 647 aa11.43□□□□□ -0.58
CPSF1P1-201ENST00000397477 L1RE1Q9UN81 338 aa11.43□□□□□ -0.58
CPSF1P1-201ENST00000397477 ARP10275 920 aa11.43□□□□□ -0.58
CPSF1P1-201ENST00000397477 KRT13P13646 458 aa11.43□□□□□ -0.58
CPSF1P1-201ENST00000397477 TCP1P17987 556 aaKnown RBP11.43□□□□□ -0.58
CPSF1P1-201ENST00000397477 PTK2Q05397 1052 aa11.43□□□□□ -0.58
CPSF1P1-201ENST00000397477 SF3B2Q13435 895 aaKnown RBP11.43□□□□□ -0.58
CPSF1P1-201ENST00000397477 ARSHQ5FYA8 562 aa11.43□□□□□ -0.58
CPSF1P1-201ENST00000397477 PEX26Q7Z412 305 aa11.43□□□□□ -0.58
CPSF1P1-201ENST00000397477 PHLDB2Q86SQ0 1253 aa11.43□□□□□ -0.58
CPSF1P1-201ENST00000397477 EHMT1Q9H9B1 1298 aa11.43□□□□□ -0.58
CPSF1P1-201ENST00000397477 NFU1Q9UMS0 254 aa11.43□□□□□ -0.58
CPSF1P1-201ENST00000397477 FZD1Q9UP38 647 aa11.43□□□□□ -0.58
CPSF1P1-201ENST00000397477 HSF2BPO75031 334 aa11.42□□□□□ -0.58
CPSF1P1-201ENST00000397477 HEXIM1O94992 359 aaKnown RBP11.42□□□□□ -0.58
CPSF1P1-201ENST00000397477 MEA1Q16626 185 aa11.42□□□□□ -0.58
CPSF1P1-201ENST00000397477 C10orf67Q8IYJ2 551 aa11.42□□□□□ -0.58
CPSF1P1-201ENST00000397477 AFAP1L1Q8TED9 768 aa11.42□□□□□ -0.58
CPSF1P1-201ENST00000397477 SMIM23A6NLE4 172 aa11.42□□□□□ -0.58
CPSF1P1-201ENST00000397477 HPDP32754 393 aaPredicted RBP11.42□□□□□ -0.58
CPSF1P1-201ENST00000397477 SSR1P43307 286 aaKnown RBP11.42□□□□□ -0.58
CPSF1P1-201ENST00000397477 AMPD2Q01433 879 aa11.42□□□□□ -0.58
CPSF1P1-201ENST00000397477 PARVGQ9HBI0 331 aa11.42□□□□□ -0.58
CPSF1P1-201ENST00000397477 CWC15Q9P013 229 aaKnown RBP11.42□□□□□ -0.58
CPSF1P1-201ENST00000397477 UTRNP46939 3433 aa11.42□□□□□ -0.58
CPSF1P1-201ENST00000397477 IGKV6D-41A0A0C4DH26 115 aa11.42□□□□□ -0.58
CPSF1P1-201ENST00000397477 GOLGA6CA6NDK9 693 aa11.42□□□□□ -0.58
CPSF1P1-201ENST00000397477 GOLGA6DP0CG33 693 aa11.42□□□□□ -0.58
CPSF1P1-201ENST00000397477 HARSP12081 509 aaKnown RBP11.42□□□□□ -0.58
CPSF1P1-201ENST00000397477 MKRN4PQ13434 485 aaPredicted RBP11.42□□□□□ -0.58
CPSF1P1-201ENST00000397477 FAM102BQ5T8I3 360 aa11.42□□□□□ -0.58
CPSF1P1-201ENST00000397477 ZNF746Q6NUN9 644 aaPredicted RBP11.42□□□□□ -0.58
CPSF1P1-201ENST00000397477 LDHDQ86WU2 507 aa11.42□□□□□ -0.58
CPSF1P1-201ENST00000397477 NIM1KQ8IY84 436 aa11.42□□□□□ -0.58
CPSF1P1-201ENST00000397477 JDP2Q8WYK2 163 aa11.42□□□□□ -0.58
CPSF1P1-201ENST00000397477 BICD1Q96G01 975 aa11.42□□□□□ -0.58
CPSF1P1-201ENST00000397477 TTYH3Q9C0H2 523 aa11.42□□□□□ -0.58
CPSF1P1-201ENST00000397477 DPH5Q9H2P9 285 aa11.42□□□□□ -0.58
CPSF1P1-201ENST00000397477 GOLGA6AQ9NYA3 693 aa11.42□□□□□ -0.58
CPSF1P1-201ENST00000397477 MRPL11Q9Y3B7 192 aaKnown RBP11.42□□□□□ -0.58
CPSF1P1-201ENST00000397477 ATP8B1O43520 1251 aa11.41□□□□□ -0.58
CPSF1P1-201ENST00000397477 ECM2O94769 699 aaPredicted RBP11.41□□□□□ -0.58
CPSF1P1-201ENST00000397477 UCHL3P15374 230 aa11.41□□□□□ -0.58
CPSF1P1-201ENST00000397477 TNFAIP3P21580 790 aa11.41□□□□□ -0.58
CPSF1P1-201ENST00000397477 RPA1P27694 616 aa11.41□□□□□ -0.58
CPSF1P1-201ENST00000397477 STAT1P42224 750 aa11.41□□□□□ -0.58
CPSF1P1-201ENST00000397477 ORC2Q13416 577 aaPredicted RBP11.41□□□□□ -0.58
CPSF1P1-201ENST00000397477 GLYCTKQ8IVS8 523 aa11.41□□□□□ -0.58
CPSF1P1-201ENST00000397477 FLAD1Q8NFF5 587 aa11.41□□□□□ -0.58
CPSF1P1-201ENST00000397477 TISP43B9A030 160 aa11.41□□□□□ -0.58
CPSF1P1-201ENST00000397477 IPO5O00410 1097 aaKnown RBP11.41□□□□□ -0.58
CPSF1P1-201ENST00000397477 STXBP4Q6ZWJ1 553 aa11.41□□□□□ -0.58
CPSF1P1-201ENST00000397477 SIAH1Q8IUQ4 282 aa11.41□□□□□ -0.58
CPSF1P1-201ENST00000397477 CEP63Q96MT8 703 aa11.41□□□□□ -0.58
CPSF1P1-201ENST00000397477 LXNQ9BS40 222 aa11.41□□□□□ -0.58
CPSF1P1-201ENST00000397477 TEKT3Q9BXF9 490 aa11.41□□□□□ -0.58
CPSF1P1-201ENST00000397477 ZKSCAN7Q9P0L1 754 aaPredicted RBP11.41□□□□□ -0.58
CPSF1P1-201ENST00000397477 ZNF70Q9UC06 446 aaPredicted RBP11.41□□□□□ -0.58
CPSF1P1-201ENST00000397477 MYH8P13535 1937 aa11.41□□□□□ -0.58
CPSF1P1-201ENST00000397477 TUBB4BP68371 445 aa11.4□□□□□ -0.58
CPSF1P1-201ENST00000397477 NBPF9Q3BBW0 867 aa11.4□□□□□ -0.58
CPSF1P1-201ENST00000397477 CFAP58Q5T655 872 aa11.4□□□□□ -0.58
CPSF1P1-201ENST00000397477 TTLL6Q8N841 843 aa11.4□□□□□ -0.58
CPSF1P1-201ENST00000397477 MSANTD4Q8NCY6 345 aa11.4□□□□□ -0.58
CPSF1P1-201ENST00000397477 BAP1Q92560 729 aa11.4□□□□□ -0.58
CPSF1P1-201ENST00000397477 PURBQ96QR8 312 aaKnown RBP11.4□□□□□ -0.58
CPSF1P1-201ENST00000397477 ATF5Q9Y2D1 282 aaPredicted RBP11.4□□□□□ -0.58
CPSF1P1-201ENST00000397477 H2AFZP0C0S5 128 aa11.4□□□□□ -0.58
CPSF1P1-201ENST00000397477 GCLMP48507 274 aa11.4□□□□□ -0.58
CPSF1P1-201ENST00000397477 PAPD7Q5XG87 772 aaKnown RBP11.4□□□□□ -0.58
CPSF1P1-201ENST00000397477 RINT1Q6NUQ1 792 aa11.4□□□□□ -0.58
CPSF1P1-201ENST00000397477 PAXIP1Q6ZW49 1069 aaPredicted RBP11.4□□□□□ -0.58
CPSF1P1-201ENST00000397477 H2AFVQ71UI9 128 aa11.4□□□□□ -0.58
CPSF1P1-201ENST00000397477 FAM76AQ8TAV0 307 aa11.4□□□□□ -0.58
CPSF1P1-201ENST00000397477 FAM20AQ96MK3 541 aa11.4□□□□□ -0.58
CPSF1P1-201ENST00000397477 FAM184BQ9ULE4 1060 aa11.4□□□□□ -0.58
CPSF1P1-201ENST00000397477 CASZ1Q86V15 1759 aa11.4□□□□□ -0.58
CPSF1P1-201ENST00000397477 A0A1W2PQJ5 194 aa11.4□□□□□ -0.58
CPSF1P1-201ENST00000397477 SHTN1A0MZ66 631 aa11.4□□□□□ -0.58
CPSF1P1-201ENST00000397477 TLR2O60603 784 aa11.4□□□□□ -0.58
CPSF1P1-201ENST00000397477 SPATA31C1P0DKV0 1188 aa11.4□□□□□ -0.58
CPSF1P1-201ENST00000397477 CYP2C19P33261 490 aa11.4□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 70.7 ms