RNA–Protein interactions for RNA: ENST00000394082.8

SNRPA1-202, Transcript of small nuclear ribonucleoprotein polypeptide A', humanhuman

TSL 1 (best)

Gene SNRPA1, Length 556 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRPA1-202ENST00000394082 IL9P15248 144 aa19.95■□□□□ 0.78
SNRPA1-202ENST00000394082 IGBP1P78318 339 aa19.95■□□□□ 0.78
SNRPA1-202ENST00000394082 BTG3Q14201 252 aaPredicted RBP19.95■□□□□ 0.78
SNRPA1-202ENST00000394082 MCTP2Q6DN12 878 aa19.95■□□□□ 0.78
SNRPA1-202ENST00000394082 CMTR2Q8IYT2 770 aaKnown RBP19.95■□□□□ 0.78
SNRPA1-202ENST00000394082 C11orf16Q9NQ32 467 aa19.95■□□□□ 0.78
SNRPA1-202ENST00000394082 BRPF3Q9ULD4 1205 aa19.95■□□□□ 0.78
SNRPA1-202ENST00000394082 TRPC6Q9Y210 931 aa19.95■□□□□ 0.78
SNRPA1-202ENST00000394082 HCN4Q9Y3Q4 1203 aa19.95■□□□□ 0.78
SNRPA1-202ENST00000394082 V9GY48 417 aaPredicted RBP19.95■□□□□ 0.78
SNRPA1-202ENST00000394082 POTEB3A0JP26 581 aa19.94■□□□□ 0.78
SNRPA1-202ENST00000394082 SMCO2A6NFE2 343 aa19.94■□□□□ 0.78
SNRPA1-202ENST00000394082 MMP1P03956 469 aa19.94■□□□□ 0.78
SNRPA1-202ENST00000394082 CD52P31358 61 aa19.94■□□□□ 0.78
SNRPA1-202ENST00000394082 ITGB3BPQ13352 177 aaPredicted RBP19.94■□□□□ 0.78
SNRPA1-202ENST00000394082 POTEBQ6S5H4 581 aa19.94■□□□□ 0.78
SNRPA1-202ENST00000394082 NPAS4Q8IUM7 802 aa19.94■□□□□ 0.78
SNRPA1-202ENST00000394082 LINC01599Q8WXQ3 324 aa19.94■□□□□ 0.78
SNRPA1-202ENST00000394082 FAM122AQ96E09 287 aa19.94■□□□□ 0.78
SNRPA1-202ENST00000394082 CELF4Q9BZC1 486 aaKnown RBP19.94■□□□□ 0.78
SNRPA1-202ENST00000394082 CCDC196A0A1B0GTZ2 297 aa19.93■□□□□ 0.78
SNRPA1-202ENST00000394082 GRM6O15303 877 aa19.93■□□□□ 0.78
SNRPA1-202ENST00000394082 HBP1O60381 514 aa19.93■□□□□ 0.78
SNRPA1-202ENST00000394082 CYP3A4P08684 503 aa19.93■□□□□ 0.78
SNRPA1-202ENST00000394082 STAG3L1P0CL83 205 aa19.93■□□□□ 0.78
SNRPA1-202ENST00000394082 ALADP13716 330 aa19.93■□□□□ 0.78
SNRPA1-202ENST00000394082 MTHFD1LQ6UB35 978 aa19.93■□□□□ 0.78
SNRPA1-202ENST00000394082 ABHD15Q6UXT9 468 aa19.93■□□□□ 0.78
SNRPA1-202ENST00000394082 RTN4RL1Q86UN2 441 aaPredicted RBP19.93■□□□□ 0.78
SNRPA1-202ENST00000394082 CRYGNQ8WXF5 182 aa19.93■□□□□ 0.78
SNRPA1-202ENST00000394082 FAM49AQ9H0Q0 323 aaPredicted RBP19.93■□□□□ 0.78
SNRPA1-202ENST00000394082 FAM217BQ9NTX9 383 aaPredicted RBP19.93■□□□□ 0.78
SNRPA1-202ENST00000394082 RNF216Q9NWF9 866 aaPredicted RBP19.93■□□□□ 0.78
SNRPA1-202ENST00000394082 PADI3Q9ULW8 664 aa19.93■□□□□ 0.78
SNRPA1-202ENST00000394082 COL1A2P08123 1366 aa19.93■□□□□ 0.78
SNRPA1-202ENST00000394082 ESYT2A0FGR8 921 aa19.92■□□□□ 0.78
SNRPA1-202ENST00000394082 H3BQ06 376 aaPredicted RBP19.92■□□□□ 0.78
SNRPA1-202ENST00000394082 LTBRP36941 435 aa19.92■□□□□ 0.78
SNRPA1-202ENST00000394082 KRT76Q01546 638 aa19.92■□□□□ 0.78
SNRPA1-202ENST00000394082 PAK2Q13177 524 aa19.92■□□□□ 0.78
SNRPA1-202ENST00000394082 CENPQQ7L2Z9 268 aaPredicted RBP19.92■□□□□ 0.78
SNRPA1-202ENST00000394082 RASEFQ8IZ41 740 aa19.92■□□□□ 0.78
SNRPA1-202ENST00000394082 PLAGL2Q9UPG8 496 aa19.92■□□□□ 0.78
SNRPA1-202ENST00000394082 C19orf67A6NJJ6 358 aa19.91■□□□□ 0.78
SNRPA1-202ENST00000394082 GOLGA8AA7E2F4 631 aa19.91■□□□□ 0.78
SNRPA1-202ENST00000394082 GOLGA8BA8MQT2 603 aa19.91■□□□□ 0.78
SNRPA1-202ENST00000394082 PRR33A8MZF0 331 aa19.91■□□□□ 0.78
SNRPA1-202ENST00000394082 PFKFB3Q16875 520 aaPredicted RBP19.91■□□□□ 0.78
SNRPA1-202ENST00000394082 ADCK5Q3MIX3 580 aa19.91■□□□□ 0.78
SNRPA1-202ENST00000394082 ODR4Q5SWX8 454 aa19.91■□□□□ 0.78
SNRPA1-202ENST00000394082 FAM160B1Q5W0V3 765 aa19.91■□□□□ 0.78
SNRPA1-202ENST00000394082 FBXL16Q8N461 479 aa19.91■□□□□ 0.78
SNRPA1-202ENST00000394082 ATP8B4Q8TF62 1192 aa19.91■□□□□ 0.78
SNRPA1-202ENST00000394082 CLDND1Q9NY35 253 aa19.91■□□□□ 0.78
SNRPA1-202ENST00000394082 ATG2AQ2TAZ0 1938 aa19.9■□□□□ 0.78
SNRPA1-202ENST00000394082 IGLV3-22A0A075B6J6 115 aa19.9■□□□□ 0.78
SNRPA1-202ENST00000394082 KLF18A0A0U1RQI7 1052 aa19.9■□□□□ 0.78
SNRPA1-202ENST00000394082 DHX15O43143 795 aaKnown RBP19.9■□□□□ 0.78
SNRPA1-202ENST00000394082 CCNE2O96020 404 aa19.9■□□□□ 0.78
SNRPA1-202ENST00000394082 SCG2P13521 617 aa19.9■□□□□ 0.78
SNRPA1-202ENST00000394082 KLRC1P26715 233 aa19.9■□□□□ 0.78
SNRPA1-202ENST00000394082 CDC27P30260 824 aa19.9■□□□□ 0.78
SNRPA1-202ENST00000394082 SSTR3P32745 418 aaPredicted RBP19.9■□□□□ 0.78
SNRPA1-202ENST00000394082 ZNF76P36508 570 aa19.9■□□□□ 0.78
SNRPA1-202ENST00000394082 ZP2Q05996 745 aa19.9■□□□□ 0.78
SNRPA1-202ENST00000394082 HYAL1Q12794 435 aa19.9■□□□□ 0.78
SNRPA1-202ENST00000394082 ZNF484Q5JVG2 852 aa19.9■□□□□ 0.78
SNRPA1-202ENST00000394082 ADHFE1Q8IWW8 467 aa19.9■□□□□ 0.78
SNRPA1-202ENST00000394082 CCDC12Q8WUD4 166 aaPredicted RBP19.9■□□□□ 0.78
SNRPA1-202ENST00000394082 TRAPPC12Q8WVT3 735 aa19.9■□□□□ 0.78
SNRPA1-202ENST00000394082 KCNB2Q92953 911 aa19.9■□□□□ 0.78
SNRPA1-202ENST00000394082 PPP2R3CQ969Q6 453 aa19.9■□□□□ 0.78
SNRPA1-202ENST00000394082 ZBTB10Q96DT7 871 aa19.9■□□□□ 0.78
SNRPA1-202ENST00000394082 PGBD1Q96JS3 809 aa19.9■□□□□ 0.78
SNRPA1-202ENST00000394082 ZMYND12Q9H0C1 365 aa19.9■□□□□ 0.78
SNRPA1-202ENST00000394082 NID2Q14112 1375 aa19.9■□□□□ 0.78
SNRPA1-202ENST00000394082 FAM86B1E9PN63 330 aa19.89■□□□□ 0.77
SNRPA1-202ENST00000394082 IPO5O00410 1097 aaKnown RBP19.89■□□□□ 0.77
SNRPA1-202ENST00000394082 FAM86B2P0C5J1 330 aa19.89■□□□□ 0.77
SNRPA1-202ENST00000394082 SETQ01105 290 aaPredicted RBP19.89■□□□□ 0.77
SNRPA1-202ENST00000394082 MYO7AQ13402 2215 aa19.89■□□□□ 0.77
SNRPA1-202ENST00000394082 CAMK1Q14012 370 aa19.89■□□□□ 0.77
SNRPA1-202ENST00000394082 SMAD2Q15796 467 aaKnown RBP19.89■□□□□ 0.77
SNRPA1-202ENST00000394082 TCEANC2Q96MN5 208 aa19.89■□□□□ 0.77
SNRPA1-202ENST00000394082 TMX1Q9H3N1 280 aa19.89■□□□□ 0.77
SNRPA1-202ENST00000394082 C5orf42Q9H799 3197 aa19.89■□□□□ 0.77
SNRPA1-202ENST00000394082 TBC1D22BQ9NU19 505 aa19.89■□□□□ 0.77
SNRPA1-202ENST00000394082 TMEM260Q9NX78 707 aa19.89■□□□□ 0.77
SNRPA1-202ENST00000394082 MRPL42Q9Y6G3 142 aaKnown RBP19.89■□□□□ 0.77
SNRPA1-202ENST00000394082 CDC45O75419 566 aa19.88■□□□□ 0.77
SNRPA1-202ENST00000394082 SARSP49591 514 aaKnown RBP19.88■□□□□ 0.77
SNRPA1-202ENST00000394082 TMEM62Q0P6H9 643 aa19.88■□□□□ 0.77
SNRPA1-202ENST00000394082 ZNF746Q6NUN9 644 aaPredicted RBP19.88■□□□□ 0.77
SNRPA1-202ENST00000394082 MIS18BP1Q6P0N0 1132 aa19.88■□□□□ 0.77
SNRPA1-202ENST00000394082 PLA2G4DQ86XP0 818 aa19.88■□□□□ 0.77
SNRPA1-202ENST00000394082 CCDC60Q8IWA6 550 aaPredicted RBP19.88■□□□□ 0.77
SNRPA1-202ENST00000394082 SMAP1Q8IYB5 467 aaPredicted RBP19.88■□□□□ 0.77
SNRPA1-202ENST00000394082 KIAA0319LQ8IZA0 1049 aa19.88■□□□□ 0.77
SNRPA1-202ENST00000394082 ZNF710Q8N1W2 664 aa19.88■□□□□ 0.77
SNRPA1-202ENST00000394082 POP1Q99575 1024 aaKnown RBP19.88■□□□□ 0.77
Retrieved 100 of 20,778 RNA–protein pairs in 23.8 ms