RNA–Protein interactions for RNA: ENST00000392456.3

CCDC50-202, Transcript of coiled-coil domain containing 50, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene CCDC50, Length 2,454 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC50-202ENST00000392456 CCDC102AQ96A19 550 aa20.89■□□□□ 0.93
CCDC50-202ENST00000392456 TAAR1Q96RJ0 339 aa20.89■□□□□ 0.93
CCDC50-202ENST00000392456 ZNF232Q9UNY5 417 aa20.89■□□□□ 0.93
CCDC50-202ENST00000392456 ATXN2Q99700 1313 aaKnown RBP20.89■□□□□ 0.93
CCDC50-202ENST00000392456 SPIRE1Q08AE8 756 aa20.88■□□□□ 0.93
CCDC50-202ENST00000392456 MORC3Q14149 939 aa20.88■□□□□ 0.93
CCDC50-202ENST00000392456 ARMCX5Q6P1M9 558 aa20.88■□□□□ 0.93
CCDC50-202ENST00000392456 NSMFQ6X4W1 530 aa20.88■□□□□ 0.93
CCDC50-202ENST00000392456 IRX2Q9BZI1 471 aaPredicted RBP20.88■□□□□ 0.93
CCDC50-202ENST00000392456 RNF146Q9NTX7 359 aa20.88■□□□□ 0.93
CCDC50-202ENST00000392456 RAB21Q9UL25 225 aa20.88■□□□□ 0.93
CCDC50-202ENST00000392456 A0A0G2JLL6 359 aaPredicted RBP20.88■□□□□ 0.93
CCDC50-202ENST00000392456 ECEL1O95672 775 aa20.88■□□□□ 0.93
CCDC50-202ENST00000392456 PLS1Q14651 629 aa20.88■□□□□ 0.93
CCDC50-202ENST00000392456 LDLRAD1Q5T700 205 aa20.88■□□□□ 0.93
CCDC50-202ENST00000392456 PRRT2Q7Z6L0 340 aaPredicted RBP20.88■□□□□ 0.93
CCDC50-202ENST00000392456 SMYD4Q8IYR2 804 aaPredicted RBP20.88■□□□□ 0.93
CCDC50-202ENST00000392456 NAP1L4Q99733 375 aaKnown RBP20.88■□□□□ 0.93
CCDC50-202ENST00000392456 HOXC10Q9NYD6 342 aa20.88■□□□□ 0.93
CCDC50-202ENST00000392456 SLC8A3P57103 927 aa20.87■□□□□ 0.93
CCDC50-202ENST00000392456 SNX29Q8TEQ0 813 aa20.87■□□□□ 0.93
CCDC50-202ENST00000392456 NMRK2Q9NPI5 230 aa20.87■□□□□ 0.93
CCDC50-202ENST00000392456 BLOC1S4Q9NUP1 217 aa20.87■□□□□ 0.93
CCDC50-202ENST00000392456 KBTBD4Q9NVX7 518 aa20.87■□□□□ 0.93
CCDC50-202ENST00000392456 PCDHGA4Q9Y5G9 962 aa20.87■□□□□ 0.93
CCDC50-202ENST00000392456 MOGSQ13724 837 aa20.87■□□□□ 0.93
CCDC50-202ENST00000392456 CRACR2AQ9BSW2 395 aa20.87■□□□□ 0.93
CCDC50-202ENST00000392456 R3HDMLQ9H3Y0 253 aa20.87■□□□□ 0.93
CCDC50-202ENST00000392456 DDX20Q9UHI6 824 aaKnown RBP20.87■□□□□ 0.93
CCDC50-202ENST00000392456 ARP10275 920 aa20.86■□□□□ 0.93
CCDC50-202ENST00000392456 GHRHRQ02643 423 aa20.86■□□□□ 0.93
CCDC50-202ENST00000392456 BAATQ14032 418 aaPredicted RBP20.86■□□□□ 0.93
CCDC50-202ENST00000392456 ARMCX6Q7L4S7 300 aa20.86■□□□□ 0.93
CCDC50-202ENST00000392456 ARMC9Q7Z3E5 817 aa20.86■□□□□ 0.93
CCDC50-202ENST00000392456 MCF2L2Q86YR7 1114 aa20.86■□□□□ 0.93
CCDC50-202ENST00000392456 PYGLP06737 847 aa20.86■□□□□ 0.93
CCDC50-202ENST00000392456 FDX1P10109 184 aa20.86■□□□□ 0.93
CCDC50-202ENST00000392456 ITGB5P18084 799 aa20.86■□□□□ 0.93
CCDC50-202ENST00000392456 EIF2AK2P19525 551 aaKnown RBP20.86■□□□□ 0.93
CCDC50-202ENST00000392456 NCAPHQ15003 741 aa20.86■□□□□ 0.93
CCDC50-202ENST00000392456 SETDB1Q15047 1291 aa20.86■□□□□ 0.93
CCDC50-202ENST00000392456 SAAL1Q96ER3 474 aa20.86■□□□□ 0.93
CCDC50-202ENST00000392456 MED15Q96RN5 788 aa20.86■□□□□ 0.93
CCDC50-202ENST00000392456 LMCD1Q9NZU5 365 aa20.86■□□□□ 0.93
CCDC50-202ENST00000392456 BTBD7Q9P203 1132 aa20.86■□□□□ 0.93
CCDC50-202ENST00000392456 CASP8Q14790 479 aa20.85■□□□□ 0.93
CCDC50-202ENST00000392456 NAA25Q14CX7 972 aa20.85■□□□□ 0.93
CCDC50-202ENST00000392456 CEP55Q53EZ4 464 aa20.85■□□□□ 0.93
CCDC50-202ENST00000392456 RNF207Q6ZRF8 634 aa20.85■□□□□ 0.93
CCDC50-202ENST00000392456 NCAPG2Q86XI2 1143 aa20.85■□□□□ 0.93
CCDC50-202ENST00000392456 MAB21L3Q8N8X9 362 aa20.85■□□□□ 0.93
CCDC50-202ENST00000392456 PYM1Q9BRP8 204 aaKnown RBP20.85■□□□□ 0.93
CCDC50-202ENST00000392456 HOMER3Q9NSC5 361 aa20.85■□□□□ 0.93
CCDC50-202ENST00000392456 KLC4Q9NSK0 619 aa20.85■□□□□ 0.93
CCDC50-202ENST00000392456 KCNH4Q9UQ05 1017 aa20.85■□□□□ 0.93
CCDC50-202ENST00000392456 RPTORQ8N122 1335 aa20.85■□□□□ 0.93
CCDC50-202ENST00000392456 GTPBP6O43824 516 aaPredicted RBP20.85■□□□□ 0.93
CCDC50-202ENST00000392456 RNF40O75150 1001 aa20.85■□□□□ 0.93
CCDC50-202ENST00000392456 ERLIN1O75477 346 aa20.85■□□□□ 0.93
CCDC50-202ENST00000392456 PRPF6O94906 941 aaKnown RBP20.85■□□□□ 0.93
CCDC50-202ENST00000392456 CD44P16070 742 aaKnown RBP20.85■□□□□ 0.93
CCDC50-202ENST00000392456 MRPS9P82933 396 aaKnown RBP20.85■□□□□ 0.93
CCDC50-202ENST00000392456 KRT79Q5XKE5 535 aa20.85■□□□□ 0.93
CCDC50-202ENST00000392456 KIRREL3Q8IZU9 778 aa20.85■□□□□ 0.93
CCDC50-202ENST00000392456 SPDYE1Q8NFV5 336 aaPredicted RBP20.85■□□□□ 0.93
CCDC50-202ENST00000392456 TEX13BQ9BXU2 312 aa20.85■□□□□ 0.93
CCDC50-202ENST00000392456 RAB34Q9BZG1 259 aa20.85■□□□□ 0.93
CCDC50-202ENST00000392456 ANKZF1Q9H8Y5 726 aa20.85■□□□□ 0.93
CCDC50-202ENST00000392456 SUGCTQ9HAC7 445 aa20.85■□□□□ 0.93
CCDC50-202ENST00000392456 CXCL11O14625 94 aa20.84■□□□□ 0.93
CCDC50-202ENST00000392456 PPIL2Q13356 520 aa20.84■□□□□ 0.93
CCDC50-202ENST00000392456 SLFN12Q8IYM2 578 aa20.84■□□□□ 0.93
CCDC50-202ENST00000392456 CALML4Q96GE6 196 aa20.84■□□□□ 0.93
CCDC50-202ENST00000392456 NAT10Q9H0A0 1025 aaKnown RBP20.84■□□□□ 0.93
CCDC50-202ENST00000392456 ABCB6Q9NP58 842 aa20.84■□□□□ 0.93
CCDC50-202ENST00000392456 VAV3Q9UKW4 847 aa20.84■□□□□ 0.93
CCDC50-202ENST00000392456 EML1O00423 815 aa20.84■□□□□ 0.93
CCDC50-202ENST00000392456 MEIS1O00470 390 aa20.84■□□□□ 0.93
CCDC50-202ENST00000392456 PEX19P40855 299 aa20.84■□□□□ 0.93
CCDC50-202ENST00000392456 MKRN3Q13064 507 aaKnown RBP20.84■□□□□ 0.93
CCDC50-202ENST00000392456 GSDMAQ96QA5 445 aa20.84■□□□□ 0.93
CCDC50-202ENST00000392456 WDR11Q9BZH6 1224 aa20.84■□□□□ 0.93
CCDC50-202ENST00000392456 HSD3B7Q9H2F3 369 aa20.84■□□□□ 0.93
CCDC50-202ENST00000392456 ATP2A1O14983 1001 aa20.83■□□□□ 0.93
CCDC50-202ENST00000392456 TBX3O15119 743 aa20.83■□□□□ 0.93
CCDC50-202ENST00000392456 MED24O75448 989 aa20.83■□□□□ 0.93
CCDC50-202ENST00000392456 SETSIPP0DME0 302 aa20.83■□□□□ 0.93
CCDC50-202ENST00000392456 SFPQP23246 707 aaKnown RBP eCLIP20.83■□□□□ 0.93
CCDC50-202ENST00000392456 HOXA7P31268 230 aaPredicted RBP20.83■□□□□ 0.93
CCDC50-202ENST00000392456 OAZ1P54368 228 aa20.83■□□□□ 0.93
CCDC50-202ENST00000392456 NAP1L1P55209 391 aaKnown RBP20.83■□□□□ 0.93
CCDC50-202ENST00000392456 ACTN3Q08043 901 aaPredicted RBP20.83■□□□□ 0.93
CCDC50-202ENST00000392456 CEP85LQ5SZL2 805 aa20.83■□□□□ 0.93
CCDC50-202ENST00000392456 NCAPH2Q6IBW4 605 aa20.83■□□□□ 0.93
CCDC50-202ENST00000392456 LBX2Q6XYB7 198 aa20.83■□□□□ 0.93
CCDC50-202ENST00000392456 TSHZ1Q6ZSZ6 1077 aa20.83■□□□□ 0.93
CCDC50-202ENST00000392456 PROCA1Q8NCQ7 364 aaPredicted RBP20.83■□□□□ 0.93
CCDC50-202ENST00000392456 SPDL1Q96EA4 605 aa20.83■□□□□ 0.93
CCDC50-202ENST00000392456 RMDN3Q96TC7 470 aa20.83■□□□□ 0.93
CCDC50-202ENST00000392456 ASCC2Q9H1I8 757 aaPredicted RBP20.83■□□□□ 0.93
Retrieved 100 of 20,778 RNA–protein pairs in 19 ms