RNA–Protein interactions for RNA: ENST00000372748.7

COL9A2-202, Transcript of collagen type IX alpha 2 chain, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene COL9A2, Length 2,862 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL9A2-202ENST00000372748 VPS72Q15906 364 aa16.17■□□□□ 0.18
COL9A2-202ENST00000372748 PRR5LQ6MZQ0 368 aa16.17■□□□□ 0.18
COL9A2-202ENST00000372748 RUFY4Q6ZNE9 571 aa16.17■□□□□ 0.18
COL9A2-202ENST00000372748 ZNF571Q7Z3V5 609 aaPredicted RBP16.17■□□□□ 0.18
COL9A2-202ENST00000372748 FAM212AQ96EL1 285 aa16.17■□□□□ 0.18
COL9A2-202ENST00000372748 PANK4Q9NVE7 773 aa16.17■□□□□ 0.18
COL9A2-202ENST00000372748 TPX2Q9ULW0 747 aaKnown RBP16.17■□□□□ 0.18
COL9A2-202ENST00000372748 RGL2O15211 777 aa16.17■□□□□ 0.18
COL9A2-202ENST00000372748 CLSTN1O94985 981 aa16.17■□□□□ 0.18
COL9A2-202ENST00000372748 USP11P51784 963 aa16.17■□□□□ 0.18
COL9A2-202ENST00000372748 DHX9Q08211 1270 aaKnown RBP16.17■□□□□ 0.18
COL9A2-202ENST00000372748 TEX2Q8IWB9 1127 aa16.17■□□□□ 0.18
COL9A2-202ENST00000372748 DHX37Q8IY37 1157 aaKnown RBP16.17■□□□□ 0.18
COL9A2-202ENST00000372748 ZHX3Q9H4I2 956 aa16.17■□□□□ 0.18
COL9A2-202ENST00000372748 ACTR5Q9H9F9 607 aaPredicted RBP16.17■□□□□ 0.18
COL9A2-202ENST00000372748 CEP83Q9Y592 693 aa16.17■□□□□ 0.18
COL9A2-202ENST00000372748 PGRMC1O00264 195 aaKnown RBP16.16■□□□□ 0.18
COL9A2-202ENST00000372748 SLC9A1P19634 815 aa16.16■□□□□ 0.18
COL9A2-202ENST00000372748 DRP2Q13474 957 aa16.16■□□□□ 0.18
COL9A2-202ENST00000372748 BIRC3Q13489 604 aa16.16■□□□□ 0.18
COL9A2-202ENST00000372748 UBE2SQ16763 222 aa16.16■□□□□ 0.18
COL9A2-202ENST00000372748 TRIM59Q8IWR1 403 aa16.16■□□□□ 0.18
COL9A2-202ENST00000372748 PROM2Q8N271 834 aa16.16■□□□□ 0.18
COL9A2-202ENST00000372748 DNAJC19Q96DA6 116 aa16.16■□□□□ 0.18
COL9A2-202ENST00000372748 DONSONQ9NYP3 566 aa16.16■□□□□ 0.18
COL9A2-202ENST00000372748 EDIL3O43854 480 aa16.16■□□□□ 0.18
COL9A2-202ENST00000372748 SLURP2P0DP57 97 aa16.16■□□□□ 0.18
COL9A2-202ENST00000372748 TNNI2P48788 182 aa16.16■□□□□ 0.18
COL9A2-202ENST00000372748 PSEN1P49768 467 aa16.16■□□□□ 0.18
COL9A2-202ENST00000372748 GKAP1Q5VSY0 366 aaPredicted RBP16.16■□□□□ 0.18
COL9A2-202ENST00000372748 EP400NLQ6ZTU2 488 aa16.16■□□□□ 0.18
COL9A2-202ENST00000372748 SGSM3Q96HU1 749 aa16.16■□□□□ 0.18
COL9A2-202ENST00000372748 SPAG5Q96R06 1193 aa16.16■□□□□ 0.18
COL9A2-202ENST00000372748 AIPL1Q9NZN9 384 aa16.16■□□□□ 0.18
COL9A2-202ENST00000372748 GGA1Q9UJY5 639 aa16.16■□□□□ 0.18
COL9A2-202ENST00000372748 COL24A1Q17RW2 1714 aa16.16■□□□□ 0.18
COL9A2-202ENST00000372748 DDX60LQ5H9U9 1706 aaKnown RBP16.16■□□□□ 0.18
COL9A2-202ENST00000372748 C6orf229H3BNL8 230 aa16.16■□□□□ 0.18
COL9A2-202ENST00000372748 FXR2P51116 673 aaKnown RBP eCLIP16.16■□□□□ 0.18
COL9A2-202ENST00000372748 POLLQ9UGP5 575 aa16.16■□□□□ 0.18
COL9A2-202ENST00000372748 ATP8A1Q9Y2Q0 1164 aa16.16■□□□□ 0.18
COL9A2-202ENST00000372748 SRCAPQ6ZRS2 3230 aa16.15■□□□□ 0.18
COL9A2-202ENST00000372748 FRMD3A2A2Y4 597 aa16.15■□□□□ 0.18
COL9A2-202ENST00000372748 RIMBP2O15034 1052 aa16.15■□□□□ 0.18
COL9A2-202ENST00000372748 AKR1B1P15121 316 aa16.15■□□□□ 0.18
COL9A2-202ENST00000372748 IFFO1Q0D2I5 559 aa16.15■□□□□ 0.18
COL9A2-202ENST00000372748 KCNH2Q12809 1159 aa16.15■□□□□ 0.18
COL9A2-202ENST00000372748 ADAM9Q13443 819 aa16.15■□□□□ 0.18
COL9A2-202ENST00000372748 TMC3Q7Z5M5 1100 aa16.15■□□□□ 0.18
COL9A2-202ENST00000372748 ADAT2Q7Z6V5 191 aaKnown RBP16.15■□□□□ 0.18
COL9A2-202ENST00000372748 KIRREL3Q8IZU9 778 aa16.15■□□□□ 0.18
COL9A2-202ENST00000372748 LRRC57Q8N9N7 239 aa16.15■□□□□ 0.18
COL9A2-202ENST00000372748 ACTRT1Q8TDG2 376 aa16.15■□□□□ 0.18
COL9A2-202ENST00000372748 BUD13Q9BRD0 619 aaKnown RBP eCLIP16.15■□□□□ 0.181e-7■■□□□ 12.8
COL9A2-202ENST00000372748 GANQ9H2C0 597 aa16.15■□□□□ 0.18
COL9A2-202ENST00000372748 SPATA31A6Q5VVP1 1343 aa16.15■□□□□ 0.18
COL9A2-202ENST00000372748 SRRM3A6NNA2 597 aaPredicted RBP16.15■□□□□ 0.18
COL9A2-202ENST00000372748 E9PMD0 336 aa16.15■□□□□ 0.18
COL9A2-202ENST00000372748 PSMD2Q13200 908 aa16.15■□□□□ 0.18
COL9A2-202ENST00000372748 HERC4Q5GLZ8 1057 aaPredicted RBP16.15■□□□□ 0.18
COL9A2-202ENST00000372748 ALKBH5Q6P6C2 394 aaKnown RBP16.15■□□□□ 0.18
COL9A2-202ENST00000372748 PEX26Q7Z412 305 aa16.15■□□□□ 0.18
COL9A2-202ENST00000372748 TATDN2Q93075 761 aa16.15■□□□□ 0.18
COL9A2-202ENST00000372748 HVCN1Q96D96 273 aa16.15■□□□□ 0.18
COL9A2-202ENST00000372748 TRIM51Q9BSJ1 452 aa16.15■□□□□ 0.18
COL9A2-202ENST00000372748 QTRT2Q9H974 415 aaKnown RBP16.15■□□□□ 0.18
COL9A2-202ENST00000372748 MARCH6O60337 910 aa16.14■□□□□ 0.17
COL9A2-202ENST00000372748 COPB2P35606 906 aa16.14■□□□□ 0.17
COL9A2-202ENST00000372748 SLC16A2P36021 539 aa16.14■□□□□ 0.17
COL9A2-202ENST00000372748 ADCY7P51828 1080 aa16.14■□□□□ 0.17
COL9A2-202ENST00000372748 GTF2IP78347 998 aa16.14■□□□□ 0.17
COL9A2-202ENST00000372748 WLSQ5T9L3 541 aa16.14■□□□□ 0.17
COL9A2-202ENST00000372748 TTBK2Q6IQ55 1244 aa16.14■□□□□ 0.17
COL9A2-202ENST00000372748 DPP8Q6V1X1 898 aaPredicted RBP16.14■□□□□ 0.17
COL9A2-202ENST00000372748 IRF2BP2Q7Z5L9 587 aa16.14■□□□□ 0.17
COL9A2-202ENST00000372748 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP16.14■□□□□ 0.17
COL9A2-202ENST00000372748 PBKQ96KB5 322 aa16.14■□□□□ 0.17
COL9A2-202ENST00000372748 GJD4Q96KN9 370 aaPredicted RBP16.14■□□□□ 0.17
COL9A2-202ENST00000372748 RAB34Q9BZG1 259 aa16.14■□□□□ 0.17
COL9A2-202ENST00000372748 RIOX1Q9H6W3 641 aa16.14■□□□□ 0.17
COL9A2-202ENST00000372748 NAGPAQ9UK23 515 aa16.14■□□□□ 0.17
COL9A2-202ENST00000372748 PNMA2Q9UL42 364 aa16.14■□□□□ 0.17
COL9A2-202ENST00000372748 NR2E1Q9Y466 385 aa16.14■□□□□ 0.17
COL9A2-202ENST00000372748 SMIM23A6NLE4 172 aa16.14■□□□□ 0.17
COL9A2-202ENST00000372748 NT5C2P49902 561 aa16.14■□□□□ 0.17
COL9A2-202ENST00000372748 TBC1D31Q96DN5 1066 aa16.14■□□□□ 0.17
COL9A2-202ENST00000372748 MTMR4Q9NYA4 1195 aa16.14■□□□□ 0.17
COL9A2-202ENST00000372748 CDK5RAP2Q96SN8 1893 aa16.14■□□□□ 0.17
COL9A2-202ENST00000372748 BTAF1O14981 1849 aa16.14■□□□□ 0.17
COL9A2-202ENST00000372748 RAD21O60216 631 aa16.13■□□□□ 0.17
COL9A2-202ENST00000372748 RPSAP08865 295 aaKnown RBP16.13■□□□□ 0.17
COL9A2-202ENST00000372748 ARHGAP27Q6ZUM4 889 aa16.13■□□□□ 0.17
COL9A2-202ENST00000372748 SCFD1Q8WVM8 642 aa16.13■□□□□ 0.17
COL9A2-202ENST00000372748 PSMD1Q99460 953 aa16.13■□□□□ 0.17
COL9A2-202ENST00000372748 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP16.13■□□□□ 0.17
COL9A2-202ENST00000372748 F8VZ95 297 aa16.13■□□□□ 0.17
COL9A2-202ENST00000372748 CTNND1O60716 968 aaKnown RBP16.13■□□□□ 0.17
COL9A2-202ENST00000372748 IL1R1P14778 569 aa16.13■□□□□ 0.17
COL9A2-202ENST00000372748 TMEM119Q4V9L6 283 aa16.13■□□□□ 0.17
COL9A2-202ENST00000372748 DAAM2Q86T65 1068 aa16.13■□□□□ 0.17
Retrieved 100 of 20,778 RNA–protein pairs in 32.4 ms