RNA–Protein interactions for RNA: ENST00000370819.5

COL21A1-203, Transcript of collagen type XXI alpha 1 chain, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene COL21A1, Length 4,094 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL21A1-203ENST00000370819 TRIM11Q96F44 468 aa8.3□□□□□ -1.08
COL21A1-203ENST00000370819 DDX27Q96GQ7 796 aaKnown RBP8.3□□□□□ -1.08
COL21A1-203ENST00000370819 CEP170P1Q96L14 293 aa8.3□□□□□ -1.08
COL21A1-203ENST00000370819 CYTH2Q99418 400 aa8.3□□□□□ -1.08
COL21A1-203ENST00000370819 TAF1DQ9H5J8 278 aaPredicted RBP8.3□□□□□ -1.08
COL21A1-203ENST00000370819 MRPL47Q9HD33 250 aaKnown RBP8.3□□□□□ -1.08
COL21A1-203ENST00000370819 EIF4ENIF1Q9NRA8 985 aaKnown RBP8.3□□□□□ -1.08
COL21A1-203ENST00000370819 ADD3Q9UEY8 706 aaKnown RBP8.3□□□□□ -1.08
COL21A1-203ENST00000370819 FAF1Q9UNN5 650 aaPredicted RBP8.3□□□□□ -1.08
COL21A1-203ENST00000370819 WDR17Q8IZU2 1322 aa8.3□□□□□ -1.08
COL21A1-203ENST00000370819 WDR19Q8NEZ3 1342 aa8.3□□□□□ -1.08
COL21A1-203ENST00000370819 A0A0G2JND7 137 aa8.3□□□□□ -1.08
COL21A1-203ENST00000370819 PODXLO00592 558 aa8.3□□□□□ -1.08
COL21A1-203ENST00000370819 CD58P19256 250 aa8.3□□□□□ -1.08
COL21A1-203ENST00000370819 ZNF746Q6NUN9 644 aaPredicted RBP8.3□□□□□ -1.08
COL21A1-203ENST00000370819 PPP4R3CPQ6ZMV5 832 aa8.3□□□□□ -1.08
COL21A1-203ENST00000370819 NYAP1Q6ZVC0 841 aa8.3□□□□□ -1.08
COL21A1-203ENST00000370819 FAM149B1Q96BN6 582 aa8.3□□□□□ -1.08
COL21A1-203ENST00000370819 ATP6V1G3Q96LB4 118 aa8.3□□□□□ -1.08
COL21A1-203ENST00000370819 RIOK1Q9BRS2 568 aaKnown RBP8.3□□□□□ -1.08
COL21A1-203ENST00000370819 PAGR1Q9BTK6 254 aa8.3□□□□□ -1.08
COL21A1-203ENST00000370819 SEPT9Q9UHD8 586 aaPredicted RBP8.3□□□□□ -1.08
COL21A1-203ENST00000370819 AMACRQ9UHK6 382 aa8.3□□□□□ -1.08
COL21A1-203ENST00000370819 FBXL5Q9UKA1 691 aa8.3□□□□□ -1.08
COL21A1-203ENST00000370819 SNX12Q9UMY4 172 aa8.3□□□□□ -1.08
COL21A1-203ENST00000370819 WDR3Q9UNX4 943 aaKnown RBP eCLIP8.3□□□□□ -1.08
COL21A1-203ENST00000370819 PLEKHG1Q9ULL1 1385 aa8.3□□□□□ -1.08
COL21A1-203ENST00000370819 KIDINS220Q9ULH0 1771 aa8.3□□□□□ -1.08
COL21A1-203ENST00000370819 PNMA6FA0A0J9YX94 578 aa8.3□□□□□ -1.08
COL21A1-203ENST00000370819 PVALEFA0A1B0GWK0 134 aa8.3□□□□□ -1.08
COL21A1-203ENST00000370819 ERVV-1B6SEH8 477 aa8.3□□□□□ -1.08
COL21A1-203ENST00000370819 RASA4BC9J798 803 aa8.3□□□□□ -1.08
COL21A1-203ENST00000370819 RASA4O43374 803 aa8.3□□□□□ -1.08
COL21A1-203ENST00000370819 PFDN1O60925 122 aa8.3□□□□□ -1.08
COL21A1-203ENST00000370819 PPP1R37O75864 691 aa8.3□□□□□ -1.08
COL21A1-203ENST00000370819 MX2P20592 715 aa8.3□□□□□ -1.08
COL21A1-203ENST00000370819 TFAMQ00059 246 aaKnown RBP8.3□□□□□ -1.08
COL21A1-203ENST00000370819 GABPAQ06546 454 aa8.3□□□□□ -1.08
COL21A1-203ENST00000370819 MMEL1Q495T6 779 aa8.3□□□□□ -1.08
COL21A1-203ENST00000370819 FBXW10Q5XX13 1052 aa8.3□□□□□ -1.08
COL21A1-203ENST00000370819 MCF2L2Q86YR7 1114 aa8.3□□□□□ -1.08
COL21A1-203ENST00000370819 PDIK1LQ8N165 341 aa8.3□□□□□ -1.08
COL21A1-203ENST00000370819 LRRC43Q8N309 656 aa8.3□□□□□ -1.08
COL21A1-203ENST00000370819 KCNV2Q8TDN2 545 aa8.3□□□□□ -1.08
COL21A1-203ENST00000370819 PYROXD1Q8WU10 500 aa8.3□□□□□ -1.08
COL21A1-203ENST00000370819 MAML1Q92585 1016 aa8.3□□□□□ -1.08
COL21A1-203ENST00000370819 PPWD1Q96BP3 646 aaKnown RBP8.3□□□□□ -1.08
COL21A1-203ENST00000370819 FAM167BQ9BTA0 163 aa8.3□□□□□ -1.08
COL21A1-203ENST00000370819 TMEM206Q9H813 350 aa8.3□□□□□ -1.08
COL21A1-203ENST00000370819 AGPAT5Q9NUQ2 364 aa8.3□□□□□ -1.08
COL21A1-203ENST00000370819 TUBE1Q9UJT0 475 aa8.3□□□□□ -1.08
COL21A1-203ENST00000370819 ANAPC7Q9UJX3 599 aa8.3□□□□□ -1.08
COL21A1-203ENST00000370819 CAPN11Q9UMQ6 739 aa8.3□□□□□ -1.08
COL21A1-203ENST00000370819 LRRC7Q96NW7 1537 aa8.3□□□□□ -1.08
COL21A1-203ENST00000370819 ZNF609O15014 1411 aa8.29□□□□□ -1.08
COL21A1-203ENST00000370819 A0A1W2PQC6 194 aa8.29□□□□□ -1.08
COL21A1-203ENST00000370819 POTEB3A0JP26 581 aa8.29□□□□□ -1.08
COL21A1-203ENST00000370819 USP17L5A8MUK1 530 aa8.29□□□□□ -1.08
COL21A1-203ENST00000370819 POTECB2RU33 542 aa8.29□□□□□ -1.08
COL21A1-203ENST00000370819 hCG_1984214I3L0E3 225 aa8.29□□□□□ -1.08
COL21A1-203ENST00000370819 MAPK13O15264 365 aa8.29□□□□□ -1.08
COL21A1-203ENST00000370819 TOM1L1O75674 476 aa8.29□□□□□ -1.08
COL21A1-203ENST00000370819 NR3C1P04150 777 aa8.29□□□□□ -1.08
COL21A1-203ENST00000370819 GCLMP48507 274 aa8.29□□□□□ -1.08
COL21A1-203ENST00000370819 ATP2C1P98194 919 aaPredicted RBP8.29□□□□□ -1.08
COL21A1-203ENST00000370819 ALX1Q15699 326 aa8.29□□□□□ -1.08
COL21A1-203ENST00000370819 CDC37Q16543 378 aaPredicted RBP8.29□□□□□ -1.08
COL21A1-203ENST00000370819 ANKRD40Q6AI12 368 aa8.29□□□□□ -1.08
COL21A1-203ENST00000370819 POTEBQ6S5H4 581 aa8.29□□□□□ -1.08
COL21A1-203ENST00000370819 ZNF713Q8N859 430 aaPredicted RBP8.29□□□□□ -1.08
COL21A1-203ENST00000370819 MCUQ8NE86 351 aa8.29□□□□□ -1.08
COL21A1-203ENST00000370819 SLC7A3Q8WY07 619 aa8.29□□□□□ -1.08
COL21A1-203ENST00000370819 SAYSD1Q9NPB0 183 aa8.29□□□□□ -1.08
COL21A1-203ENST00000370819 DCP1AQ9NPI6 582 aaPredicted RBP8.29□□□□□ -1.08
COL21A1-203ENST00000370819 GINM1Q9NU53 330 aa8.29□□□□□ -1.08
COL21A1-203ENST00000370819 TMEM260Q9NX78 707 aa8.29□□□□□ -1.08
COL21A1-203ENST00000370819 TSPOAP1O95153 1857 aa8.29□□□□□ -1.08
COL21A1-203ENST00000370819 TRPM1Q7Z4N2 1603 aa8.29□□□□□ -1.08
COL21A1-203ENST00000370819 EFCAB6Q5THR3 1501 aa8.29□□□□□ -1.08
COL21A1-203ENST00000370819 MCF2LO15068 1137 aa8.29□□□□□ -1.08
COL21A1-203ENST00000370819 TRPA1O75762 1119 aa8.29□□□□□ -1.08
COL21A1-203ENST00000370819 CPP00450 1065 aa8.29□□□□□ -1.08
COL21A1-203ENST00000370819 FDPSP14324 419 aaKnown RBP8.29□□□□□ -1.08
COL21A1-203ENST00000370819 BRAFP15056 766 aa8.29□□□□□ -1.08
COL21A1-203ENST00000370819 COASYQ13057 564 aa8.29□□□□□ -1.08
COL21A1-203ENST00000370819 NBPF9Q3BBW0 867 aa8.29□□□□□ -1.08
COL21A1-203ENST00000370819 RINT1Q6NUQ1 792 aa8.29□□□□□ -1.08
COL21A1-203ENST00000370819 PROM2Q8N271 834 aa8.29□□□□□ -1.08
COL21A1-203ENST00000370819 GUF1Q8N442 669 aaKnown RBP8.29□□□□□ -1.08
COL21A1-203ENST00000370819 ATP6V0A1Q93050 837 aa8.29□□□□□ -1.08
COL21A1-203ENST00000370819 MS4A14Q96JA4 679 aa8.29□□□□□ -1.08
COL21A1-203ENST00000370819 SMARCAL1Q9NZC9 954 aa8.29□□□□□ -1.08
COL21A1-203ENST00000370819 TTC7AQ9ULT0 858 aaPredicted RBP8.29□□□□□ -1.08
COL21A1-203ENST00000370819 MAGED2Q9UNF1 606 aaPredicted RBP8.29□□□□□ -1.08
COL21A1-203ENST00000370819 LOC102724159A0A0B4J2E5 919 aa8.29□□□□□ -1.08
COL21A1-203ENST00000370819 A0A0G2JLW4 131 aa8.29□□□□□ -1.08
COL21A1-203ENST00000370819 MIF4GDA9UHW6 222 aaKnown RBP8.29□□□□□ -1.08
COL21A1-203ENST00000370819 INO80B-WBP1J3KQ70 363 aa8.29□□□□□ -1.08
COL21A1-203ENST00000370819 ZRANB2O95218 330 aaKnown RBP eCLIP8.29□□□□□ -1.08
COL21A1-203ENST00000370819 ZWINTO95229 277 aa8.29□□□□□ -1.08
Retrieved 100 of 20,778 RNA–protein pairs in 15.9 ms