RNA–Protein interactions for RNA: ENST00000369407.3

PHGDH-201, Transcript of phosphoglycerate dehydrogenase, humanhuman

TSL 2

Gene PHGDH, Length 3,180 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHGDH-201ENST00000369407 MTMR9Q96QG7 549 aa13.4□□□□□ -0.26
PHGDH-201ENST00000369407 GANQ9H2C0 597 aa13.4□□□□□ -0.26
PHGDH-201ENST00000369407 OSGEPQ9NPF4 335 aa13.4□□□□□ -0.26
PHGDH-201ENST00000369407 IRAK4Q9NWZ3 460 aa13.4□□□□□ -0.26
PHGDH-201ENST00000369407 ARAP2Q8WZ64 1704 aa13.4□□□□□ -0.26
PHGDH-201ENST00000369407 BUB1BO60566 1050 aaPredicted RBP13.4□□□□□ -0.26
PHGDH-201ENST00000369407 MMEP08473 750 aa13.4□□□□□ -0.26
PHGDH-201ENST00000369407 GNA11P29992 359 aa13.4□□□□□ -0.26
PHGDH-201ENST00000369407 HIBADHP31937 336 aaKnown RBP13.4□□□□□ -0.26
PHGDH-201ENST00000369407 TMEM266Q2M3C6 531 aa13.4□□□□□ -0.26
PHGDH-201ENST00000369407 TCERG1LQ5VWI1 586 aa13.4□□□□□ -0.26
PHGDH-201ENST00000369407 GALNT17Q6IS24 598 aa13.4□□□□□ -0.26
PHGDH-201ENST00000369407 AADACL2Q6P093 401 aa13.4□□□□□ -0.26
PHGDH-201ENST00000369407 IRF2BP2Q7Z5L9 587 aa13.4□□□□□ -0.26
PHGDH-201ENST00000369407 CADPS2Q86UW7 1296 aa13.4□□□□□ -0.26
PHGDH-201ENST00000369407 TRIM59Q8IWR1 403 aa13.4□□□□□ -0.26
PHGDH-201ENST00000369407 LRRC34Q8IZ02 419 aa13.4□□□□□ -0.26
PHGDH-201ENST00000369407 C1orf131Q8NDD1 294 aaKnown RBP13.4□□□□□ -0.26
PHGDH-201ENST00000369407 TPCN2Q8NHX9 752 aa13.4□□□□□ -0.26
PHGDH-201ENST00000369407 RBM46Q8TBY0 533 aaKnown RBP13.4□□□□□ -0.26
PHGDH-201ENST00000369407 TRIM6Q9C030 488 aaPredicted RBP13.4□□□□□ -0.26
PHGDH-201ENST00000369407 BCAS3Q9H6U6 928 aa13.4□□□□□ -0.26
PHGDH-201ENST00000369407 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP13.4□□□□□ -0.26
PHGDH-201ENST00000369407 NAGPAQ9UK23 515 aa13.4□□□□□ -0.26
PHGDH-201ENST00000369407 SPDYE3A6NKU9 549 aa13.4□□□□□ -0.26
PHGDH-201ENST00000369407 USP17L5A8MUK1 530 aa13.4□□□□□ -0.26
PHGDH-201ENST00000369407 VIMP08670 466 aaKnown RBP13.4□□□□□ -0.26
PHGDH-201ENST00000369407 ABCB4P21439 1286 aa13.4□□□□□ -0.26
PHGDH-201ENST00000369407 PLTPP55058 493 aa13.4□□□□□ -0.26
PHGDH-201ENST00000369407 XRCC4Q13426 336 aa13.4□□□□□ -0.26
PHGDH-201ENST00000369407 COBLL1Q53SF7 1204 aa13.4□□□□□ -0.26
PHGDH-201ENST00000369407 CLEC10AQ8IUN9 316 aa13.4□□□□□ -0.26
PHGDH-201ENST00000369407 CCDC197Q8NCU1 140 aa13.4□□□□□ -0.26
PHGDH-201ENST00000369407 U2AF1L4Q8WU68 220 aaKnown RBP13.4□□□□□ -0.26
PHGDH-201ENST00000369407 BTG4Q9NY30 223 aa13.4□□□□□ -0.26
PHGDH-201ENST00000369407 STK17AQ9UEE5 414 aa13.4□□□□□ -0.26
PHGDH-201ENST00000369407 CCT8L1PA6NM43 557 aa13.39□□□□□ -0.27
PHGDH-201ENST00000369407 ENO4A6NNW6 628 aa13.39□□□□□ -0.27
PHGDH-201ENST00000369407 SBK1Q52WX2 424 aa13.39□□□□□ -0.27
PHGDH-201ENST00000369407 SPTY2D1Q68D10 685 aaPredicted RBP13.39□□□□□ -0.27
PHGDH-201ENST00000369407 ACTRT1Q8TDG2 376 aa13.39□□□□□ -0.27
PHGDH-201ENST00000369407 PRMT1Q99873 361 aaKnown RBP13.39□□□□□ -0.27
PHGDH-201ENST00000369407 EDEM3Q9BZQ6 932 aa13.39□□□□□ -0.27
PHGDH-201ENST00000369407 AZI2Q9H6S1 392 aa13.39□□□□□ -0.27
PHGDH-201ENST00000369407 RIC8AQ9NPQ8 531 aa13.39□□□□□ -0.27
PHGDH-201ENST00000369407 CCDC87Q9NVE4 849 aa13.39□□□□□ -0.27
PHGDH-201ENST00000369407 SNX24Q9Y343 169 aa13.39□□□□□ -0.27
PHGDH-201ENST00000369407 TNKS1BP1Q9C0C2 1729 aaKnown RBP13.39□□□□□ -0.27
PHGDH-201ENST00000369407 C5orf60A6NFR6 353 aa13.39□□□□□ -0.27
PHGDH-201ENST00000369407 CASP5P51878 434 aa13.39□□□□□ -0.27
PHGDH-201ENST00000369407 AGBL2Q5U5Z8 902 aa13.39□□□□□ -0.27
PHGDH-201ENST00000369407 MGARPQ8TDB4 240 aa13.39□□□□□ -0.27
PHGDH-201ENST00000369407 FAXDC2Q96IV6 333 aa13.39□□□□□ -0.27
PHGDH-201ENST00000369407 PBKQ96KB5 322 aa13.39□□□□□ -0.27
PHGDH-201ENST00000369407 GPR101Q96P66 508 aaPredicted RBP13.39□□□□□ -0.27
PHGDH-201ENST00000369407 MLXIPLQ9NP71 852 aa13.39□□□□□ -0.27
PHGDH-201ENST00000369407 ABCF3Q9NUQ8 709 aa13.39□□□□□ -0.27
PHGDH-201ENST00000369407 AIPL1Q9NZN9 384 aa13.39□□□□□ -0.27
PHGDH-201ENST00000369407 KIAA1024Q9UPX6 916 aa13.39□□□□□ -0.27
PHGDH-201ENST00000369407 UTP11Q9Y3A2 253 aaKnown RBP13.39□□□□□ -0.27
PHGDH-201ENST00000369407 CASZ1Q86V15 1759 aa13.39□□□□□ -0.27
PHGDH-201ENST00000369407 PPIP5K2O43314 1243 aa13.38□□□□□ -0.27
PHGDH-201ENST00000369407 UCHL3P15374 230 aa13.38□□□□□ -0.27
PHGDH-201ENST00000369407 CCNHP51946 323 aaPredicted RBP13.38□□□□□ -0.27
PHGDH-201ENST00000369407 LRRC14Q15048 493 aa13.38□□□□□ -0.27
PHGDH-201ENST00000369407 LLGL1Q15334 1064 aa13.38□□□□□ -0.27
PHGDH-201ENST00000369407 FBXO33Q7Z6M2 555 aa13.38□□□□□ -0.27
PHGDH-201ENST00000369407 CCDC63Q8NA47 563 aa13.38□□□□□ -0.27
PHGDH-201ENST00000369407 NSMCE1Q8WV22 266 aa13.38□□□□□ -0.27
PHGDH-201ENST00000369407 SCFD1Q8WVM8 642 aa13.38□□□□□ -0.27
PHGDH-201ENST00000369407 PRCCQ92733 491 aaPredicted RBP13.38□□□□□ -0.27
PHGDH-201ENST00000369407 SYN2Q92777 582 aaPredicted RBP13.38□□□□□ -0.27
PHGDH-201ENST00000369407 FMO2Q99518 471 aa13.38□□□□□ -0.27
PHGDH-201ENST00000369407 NUCKS1Q9H1E3 243 aaKnown RBP13.38□□□□□ -0.27
PHGDH-201ENST00000369407 IKZF4Q9H2S9 585 aa13.38□□□□□ -0.27
PHGDH-201ENST00000369407 ERVK-5Q9HDB9 667 aa13.38□□□□□ -0.27
PHGDH-201ENST00000369407 AGAP1Q9UPQ3 857 aa13.38□□□□□ -0.27
PHGDH-201ENST00000369407 FOXO6A8MYZ6 492 aa13.38□□□□□ -0.27
PHGDH-201ENST00000369407 TULP1O00294 542 aaPredicted RBP13.38□□□□□ -0.27
PHGDH-201ENST00000369407 MGRN1O60291 552 aa13.38□□□□□ -0.27
PHGDH-201ENST00000369407 AP1G2O75843 785 aa13.38□□□□□ -0.27
PHGDH-201ENST00000369407 KRT18P05783 430 aaKnown RBP13.38□□□□□ -0.27
PHGDH-201ENST00000369407 RASA1P20936 1047 aa13.38□□□□□ -0.27
PHGDH-201ENST00000369407 NR2F2P24468 414 aa13.38□□□□□ -0.27
PHGDH-201ENST00000369407 ERMARDQ5T6L9 678 aa13.38□□□□□ -0.27
PHGDH-201ENST00000369407 KIF2BQ8N4N8 673 aa13.38□□□□□ -0.27
PHGDH-201ENST00000369407 TACO1Q9BSH4 297 aaKnown RBP13.38□□□□□ -0.27
PHGDH-201ENST00000369407 HDAC9Q9UKV0 1011 aa13.38□□□□□ -0.27
PHGDH-201ENST00000369407 ABCB11O95342 1321 aa13.38□□□□□ -0.27
PHGDH-201ENST00000369407 POTEB3A0JP26 581 aa13.38□□□□□ -0.27
PHGDH-201ENST00000369407 POTECB2RU33 542 aa13.38□□□□□ -0.27
PHGDH-201ENST00000369407 MYBL1P10243 752 aa13.38□□□□□ -0.27
PHGDH-201ENST00000369407 STAT3P40763 770 aa13.38□□□□□ -0.27
PHGDH-201ENST00000369407 KCNJ2P63252 427 aa13.38□□□□□ -0.27
PHGDH-201ENST00000369407 LACTB2Q53H82 288 aaPredicted RBP13.38□□□□□ -0.27
PHGDH-201ENST00000369407 POTEBQ6S5H4 581 aa13.38□□□□□ -0.27
PHGDH-201ENST00000369407 ATP8B4Q8TF62 1192 aa13.38□□□□□ -0.27
PHGDH-201ENST00000369407 FAM129AQ9BZQ8 928 aa13.38□□□□□ -0.27
PHGDH-201ENST00000369407 GPCPD1Q9NPB8 672 aa13.38□□□□□ -0.27
PHGDH-201ENST00000369407 EMILIN3Q9NT22 766 aa13.38□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 32.6 ms