RNA–Protein interactions for RNA: ENST00000358170.6

CD46-205, Transcript of CD46 molecule, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CD46, Length 3,371 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD46-205ENST00000358170 PROM2Q8N271 834 aa9.06□□□□□ -0.96
CD46-205ENST00000358170 ZNF713Q8N859 430 aaPredicted RBP9.06□□□□□ -0.96
CD46-205ENST00000358170 CCDC17Q96LX7 622 aa9.06□□□□□ -0.96
CD46-205ENST00000358170 EIF2AK1Q9BQI3 630 aaKnown RBP9.06□□□□□ -0.96
CD46-205ENST00000358170 DDX47Q9H0S4 455 aaKnown RBP9.06□□□□□ -0.96
CD46-205ENST00000358170 TNRC6CQ9HCJ0 1690 aaKnown RBP9.06□□□□□ -0.96
CD46-205ENST00000358170 AFPP02771 609 aaKnown RBP9.05□□□□□ -0.96
CD46-205ENST00000358170 EPB41P11171 864 aaKnown RBP9.05□□□□□ -0.96
CD46-205ENST00000358170 HOXA10P31260 410 aaPredicted RBP9.05□□□□□ -0.96
CD46-205ENST00000358170 PDCLQ13371 301 aa9.05□□□□□ -0.96
CD46-205ENST00000358170 SLC18A3Q16572 532 aa9.05□□□□□ -0.96
CD46-205ENST00000358170 ZCWPW2Q504Y3 356 aa9.05□□□□□ -0.96
CD46-205ENST00000358170 LRCH2Q5VUJ6 765 aa9.05□□□□□ -0.96
CD46-205ENST00000358170 DAAM2Q86T65 1068 aa9.05□□□□□ -0.96
CD46-205ENST00000358170 SIAH1Q8IUQ4 282 aa9.05□□□□□ -0.96
CD46-205ENST00000358170 SLFN12Q8IYM2 578 aa9.05□□□□□ -0.96
CD46-205ENST00000358170 BANK1Q8NDB2 785 aa9.05□□□□□ -0.96
CD46-205ENST00000358170 OR2W6PQ8NHA6 318 aa9.05□□□□□ -0.96
CD46-205ENST00000358170 DPH5Q9H2P9 285 aa9.05□□□□□ -0.96
CD46-205ENST00000358170 XPO5Q9HAV4 1204 aaKnown RBP eCLIP9.05□□□□□ -0.96
CD46-205ENST00000358170 ZBTB12Q9Y330 459 aaPredicted RBP9.05□□□□□ -0.96
CD46-205ENST00000358170 SPATA31C1P0DKV0 1188 aa9.05□□□□□ -0.96
CD46-205ENST00000358170 NPR1P16066 1061 aa9.05□□□□□ -0.96
CD46-205ENST00000358170 ALDH1B1P30837 517 aa9.05□□□□□ -0.96
CD46-205ENST00000358170 CLK2P49760 499 aaKnown RBP9.05□□□□□ -0.96
CD46-205ENST00000358170 SLC12A3P55017 1021 aa9.05□□□□□ -0.96
CD46-205ENST00000358170 RRP1BQ14684 758 aaKnown RBP9.05□□□□□ -0.96
CD46-205ENST00000358170 CDAN1Q8IWY9 1227 aa9.05□□□□□ -0.96
CD46-205ENST00000358170 PURBQ96QR8 312 aaKnown RBP9.05□□□□□ -0.96
CD46-205ENST00000358170 KCTD10Q9H3F6 313 aa9.05□□□□□ -0.96
CD46-205ENST00000358170 AJAP1Q9UKB5 411 aaPredicted RBP9.05□□□□□ -0.96
CD46-205ENST00000358170 TISP43B9A030 160 aa9.04□□□□□ -0.96
CD46-205ENST00000358170 CDK17Q00537 523 aa9.04□□□□□ -0.96
CD46-205ENST00000358170 SP4Q02446 784 aa9.04□□□□□ -0.96
CD46-205ENST00000358170 KRT27Q7Z3Y8 459 aa9.04□□□□□ -0.96
CD46-205ENST00000358170 PEX26Q7Z412 305 aa9.04□□□□□ -0.96
CD46-205ENST00000358170 GLYCTKQ8IVS8 523 aa9.04□□□□□ -0.96
CD46-205ENST00000358170 BCAS4Q8TDM0 211 aa9.04□□□□□ -0.96
CD46-205ENST00000358170 PRR12Q9ULL5 1215 aa9.04□□□□□ -0.96
CD46-205ENST00000358170 ATF5Q9Y2D1 282 aaPredicted RBP9.04□□□□□ -0.96
CD46-205ENST00000358170 KIAA1551Q9HCM1 1747 aa9.04□□□□□ -0.96
CD46-205ENST00000358170 TARSL2A2RTX5 802 aaKnown RBP9.04□□□□□ -0.96
CD46-205ENST00000358170 GRID2IPA4D2P6 1211 aa9.04□□□□□ -0.96
CD46-205ENST00000358170 SMIM23A6NLE4 172 aa9.04□□□□□ -0.96
CD46-205ENST00000358170 BACH1O14867 736 aa9.04□□□□□ -0.96
CD46-205ENST00000358170 GAS7O60861 476 aa9.04□□□□□ -0.96
CD46-205ENST00000358170 PON1P27169 355 aa9.04□□□□□ -0.96
CD46-205ENST00000358170 HNRNPH3P31942 346 aaKnown RBP9.04□□□□□ -0.96
CD46-205ENST00000358170 USP11P51784 963 aa9.04□□□□□ -0.96
CD46-205ENST00000358170 ODF2Q5BJF6 829 aa9.04□□□□□ -0.96
CD46-205ENST00000358170 ODR4Q5SWX8 454 aa9.04□□□□□ -0.96
CD46-205ENST00000358170 IFT20Q8IY31 132 aa9.04□□□□□ -0.96
CD46-205ENST00000358170 CEP63Q96MT8 703 aa9.04□□□□□ -0.96
CD46-205ENST00000358170 KCNMB3Q9NPA1 279 aa9.04□□□□□ -0.96
CD46-205ENST00000358170 SSU72P8A0A1W2PR75 194 aa9.04□□□□□ -0.96
CD46-205ENST00000358170 PPIP5K2O43314 1243 aa9.04□□□□□ -0.96
CD46-205ENST00000358170 RAD51CO43502 376 aa9.04□□□□□ -0.96
CD46-205ENST00000358170 C21orf2O43822 256 aa9.04□□□□□ -0.96
CD46-205ENST00000358170 CALUO43852 315 aaPredicted RBP9.04□□□□□ -0.96
CD46-205ENST00000358170 GNA14O95837 355 aa9.04□□□□□ -0.96
CD46-205ENST00000358170 ZNF211Q13398 564 aaPredicted RBP9.04□□□□□ -0.96
CD46-205ENST00000358170 NAB2Q15742 525 aa9.04□□□□□ -0.96
CD46-205ENST00000358170 HHIPL2Q6UWX4 724 aa9.04□□□□□ -0.96
CD46-205ENST00000358170 GBP6Q6ZN66 633 aa9.04□□□□□ -0.96
CD46-205ENST00000358170 FAM178BQ8IXR5 827 aa9.04□□□□□ -0.96
CD46-205ENST00000358170 NLGN1Q8N2Q7 840 aa9.04□□□□□ -0.96
CD46-205ENST00000358170 MMGT1Q8N4V1 131 aa9.04□□□□□ -0.96
CD46-205ENST00000358170 UHMK1Q8TAS1 419 aaKnown RBP9.04□□□□□ -0.96
CD46-205ENST00000358170 HOOK2Q96ED9 719 aa9.04□□□□□ -0.96
CD46-205ENST00000358170 ZIM3Q96PE6 472 aa9.04□□□□□ -0.96
CD46-205ENST00000358170 GOPCQ9HD26 462 aa9.04□□□□□ -0.96
CD46-205ENST00000358170 TRPC5Q9UL62 973 aaPredicted RBP9.04□□□□□ -0.96
CD46-205ENST00000358170 TMEM150BA6NC51 233 aa9.03□□□□□ -0.96
CD46-205ENST00000358170 EXOC3O60645 756 aa9.03□□□□□ -0.96
CD46-205ENST00000358170 ITGA4P13612 1032 aa9.03□□□□□ -0.96
CD46-205ENST00000358170 RPA1P27694 616 aa9.03□□□□□ -0.96
CD46-205ENST00000358170 HSPA1LP34931 641 aa9.03□□□□□ -0.96
CD46-205ENST00000358170 HOXD13P35453 343 aa9.03□□□□□ -0.96
CD46-205ENST00000358170 NNTQ13423 1086 aa9.03□□□□□ -0.96
CD46-205ENST00000358170 ASTE1Q2TB18 679 aaPredicted RBP9.03□□□□□ -0.96
CD46-205ENST00000358170 CEP85LQ5SZL2 805 aa9.03□□□□□ -0.96
CD46-205ENST00000358170 ZNF746Q6NUN9 644 aaPredicted RBP9.03□□□□□ -0.96
CD46-205ENST00000358170 TMEM179Q6ZVK1 233 aa9.03□□□□□ -0.96
CD46-205ENST00000358170 FAM186BQ8IYM0 893 aa9.03□□□□□ -0.96
CD46-205ENST00000358170 RBM46Q8TBY0 533 aaKnown RBP9.03□□□□□ -0.96
CD46-205ENST00000358170 AENQ8WTP8 325 aaKnown RBP9.03□□□□□ -0.96
CD46-205ENST00000358170 CAPS2Q9BXY5 557 aa9.03□□□□□ -0.96
CD46-205ENST00000358170 CELF4Q9BZC1 486 aaKnown RBP9.03□□□□□ -0.96
CD46-205ENST00000358170 OSGEPQ9NPF4 335 aa9.03□□□□□ -0.96
CD46-205ENST00000358170 AMACRQ9UHK6 382 aa9.03□□□□□ -0.96
CD46-205ENST00000358170 PCDHA2Q9Y5H9 948 aa9.03□□□□□ -0.96
CD46-205ENST00000358170 LAMB2P55268 1798 aa9.03□□□□□ -0.96
CD46-205ENST00000358170 H0YIN7 160 aa9.03□□□□□ -0.96
CD46-205ENST00000358170 KRIT1O00522 736 aa9.03□□□□□ -0.96
CD46-205ENST00000358170 IVLP07476 585 aa9.03□□□□□ -0.96
CD46-205ENST00000358170 H2AFZP0C0S5 128 aa9.03□□□□□ -0.96
CD46-205ENST00000358170 RPL13P26373 211 aaKnown RBP9.03□□□□□ -0.96
CD46-205ENST00000358170 EPHB4P54760 987 aa9.03□□□□□ -0.96
CD46-205ENST00000358170 ORC2Q13416 577 aaPredicted RBP9.03□□□□□ -0.96
CD46-205ENST00000358170 PPP1R18Q6NYC8 613 aa9.03□□□□□ -0.96
Retrieved 100 of 20,778 RNA–protein pairs in 36.9 ms