RNA–Protein interactions for RNA: ENST00000354363.10

PRPF40A-201, Transcript of pre-mRNA processing factor 40 homolog A, humanhuman

TSL 2

Gene PRPF40A, Length 1,622 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF40A-201ENST00000354363 RWDD3Q9Y3V2 267 aa16.48■□□□□ 0.23
PRPF40A-201ENST00000354363 IGKV6D-21A0A0A0MT36 114 aa16.47■□□□□ 0.23
PRPF40A-201ENST00000354363 POTEB3A0JP26 581 aa16.47■□□□□ 0.23
PRPF40A-201ENST00000354363 M0QZ92 97 aa16.47■□□□□ 0.23
PRPF40A-201ENST00000354363 DDX39AO00148 427 aaKnown RBP16.47■□□□□ 0.23
PRPF40A-201ENST00000354363 DGKIO75912 1065 aa16.47■□□□□ 0.23
PRPF40A-201ENST00000354363 CCNE2O96020 404 aa16.47■□□□□ 0.23
PRPF40A-201ENST00000354363 CPA1P15085 419 aa16.47■□□□□ 0.23
PRPF40A-201ENST00000354363 ADD1P35611 737 aaKnown RBP16.47■□□□□ 0.23
PRPF40A-201ENST00000354363 ZNF76P36508 570 aa16.47■□□□□ 0.23
PRPF40A-201ENST00000354363 PFKFB3Q16875 520 aaPredicted RBP16.47■□□□□ 0.23
PRPF40A-201ENST00000354363 JAKMIP3Q5VZ66 844 aa16.47■□□□□ 0.23
PRPF40A-201ENST00000354363 POTEBQ6S5H4 581 aa16.47■□□□□ 0.23
PRPF40A-201ENST00000354363 ABHD15Q6UXT9 468 aa16.47■□□□□ 0.23
PRPF40A-201ENST00000354363 KCNB2Q92953 911 aa16.47■□□□□ 0.23
PRPF40A-201ENST00000354363 CLP1Q92989 425 aaKnown RBP16.47■□□□□ 0.23
PRPF40A-201ENST00000354363 IGSF9BQ9UPX0 1349 aa16.47■□□□□ 0.23
PRPF40A-201ENST00000354363 SMIM35A0A1B0GVV1 85 aa16.46■□□□□ 0.23
PRPF40A-201ENST00000354363 FAM86B1E9PN63 330 aa16.46■□□□□ 0.23
PRPF40A-201ENST00000354363 GRM6O15303 877 aa16.46■□□□□ 0.23
PRPF40A-201ENST00000354363 FAM86B2P0C5J1 330 aa16.46■□□□□ 0.23
PRPF40A-201ENST00000354363 SCG2P13521 617 aa16.46■□□□□ 0.23
PRPF40A-201ENST00000354363 IL9P15248 144 aa16.46■□□□□ 0.23
PRPF40A-201ENST00000354363 SLC26A2P50443 739 aa16.46■□□□□ 0.23
PRPF40A-201ENST00000354363 METAP2P50579 478 aaKnown RBP eCLIP16.46■□□□□ 0.23
PRPF40A-201ENST00000354363 FGD1P98174 961 aa16.46■□□□□ 0.23
PRPF40A-201ENST00000354363 APOBRQ0VD83 1088 aa16.46■□□□□ 0.23
PRPF40A-201ENST00000354363 BTG3Q14201 252 aaPredicted RBP16.46■□□□□ 0.23
PRPF40A-201ENST00000354363 COL19A1Q14993 1142 aa16.46■□□□□ 0.23
PRPF40A-201ENST00000354363 PTCRAQ6ISU1 281 aaPredicted RBP16.46■□□□□ 0.23
PRPF40A-201ENST00000354363 MTHFD1LQ6UB35 978 aa16.46■□□□□ 0.23
PRPF40A-201ENST00000354363 Q6ZUG5 572 aa16.46■□□□□ 0.23
PRPF40A-201ENST00000354363 PLA2G4DQ86XP0 818 aa16.46■□□□□ 0.23
PRPF40A-201ENST00000354363 FAM178BQ8IXR5 827 aa16.46■□□□□ 0.23
PRPF40A-201ENST00000354363 CRIPAKQ8N1N5 446 aa16.46■□□□□ 0.23
PRPF40A-201ENST00000354363 CRYGNQ8WXF5 182 aa16.46■□□□□ 0.23
PRPF40A-201ENST00000354363 PABPC5Q96DU9 382 aaKnown RBP16.46■□□□□ 0.23
PRPF40A-201ENST00000354363 C11orf84Q9BUA3 381 aaPredicted RBP16.46■□□□□ 0.23
PRPF40A-201ENST00000354363 FTHL17Q9BXU8 183 aa16.46■□□□□ 0.23
PRPF40A-201ENST00000354363 CELF4Q9BZC1 486 aaKnown RBP16.46■□□□□ 0.23
PRPF40A-201ENST00000354363 LMAN2LQ9H0V9 348 aa16.46■□□□□ 0.23
PRPF40A-201ENST00000354363 PADI3Q9ULW8 664 aa16.46■□□□□ 0.23
PRPF40A-201ENST00000354363 KDM3AQ9Y4C1 1321 aa16.46■□□□□ 0.23
PRPF40A-201ENST00000354363 PLXNA4Q9HCM2 1894 aa16.45■□□□□ 0.22
PRPF40A-201ENST00000354363 IGLV3-22A0A075B6J6 115 aa16.45■□□□□ 0.22
PRPF40A-201ENST00000354363 GRXCR2A6NFK2 248 aa16.45■□□□□ 0.22
PRPF40A-201ENST00000354363 H3BQ06 376 aaPredicted RBP16.45■□□□□ 0.22
PRPF40A-201ENST00000354363 ADAMTS3O15072 1205 aa16.45■□□□□ 0.22
PRPF40A-201ENST00000354363 DHX15O43143 795 aaKnown RBP16.45■□□□□ 0.22
PRPF40A-201ENST00000354363 CYP3A4P08684 503 aa16.45■□□□□ 0.22
PRPF40A-201ENST00000354363 NME8Q8N427 588 aa16.45■□□□□ 0.22
PRPF40A-201ENST00000354363 CCDC196A0A1B0GTZ2 297 aa16.45■□□□□ 0.22
PRPF40A-201ENST00000354363 ESYT2A0FGR8 921 aa16.45■□□□□ 0.22
PRPF40A-201ENST00000354363 BACH1O14867 736 aa16.45■□□□□ 0.22
PRPF40A-201ENST00000354363 HBP1O60381 514 aa16.45■□□□□ 0.22
PRPF40A-201ENST00000354363 KLRC1P26715 233 aa16.45■□□□□ 0.22
PRPF40A-201ENST00000354363 KRT76Q01546 638 aa16.45■□□□□ 0.22
PRPF40A-201ENST00000354363 PAK2Q13177 524 aa16.45■□□□□ 0.22
PRPF40A-201ENST00000354363 PUS10Q3MIT2 529 aaKnown RBP16.45■□□□□ 0.22
PRPF40A-201ENST00000354363 FAM160B1Q5W0V3 765 aa16.45■□□□□ 0.22
PRPF40A-201ENST00000354363 NPAS4Q8IUM7 802 aa16.45■□□□□ 0.22
PRPF40A-201ENST00000354363 CCDC60Q8IWA6 550 aaPredicted RBP16.45■□□□□ 0.22
PRPF40A-201ENST00000354363 ATP8B4Q8TF62 1192 aa16.45■□□□□ 0.22
PRPF40A-201ENST00000354363 BRF1Q92994 677 aa16.45■□□□□ 0.22
PRPF40A-201ENST00000354363 JAKMIP1Q96N16 626 aaKnown RBP16.45■□□□□ 0.22
PRPF40A-201ENST00000354363 UIMC1Q96RL1 719 aa16.45■□□□□ 0.22
PRPF40A-201ENST00000354363 LRFN3Q9BTN0 628 aa16.45■□□□□ 0.22
PRPF40A-201ENST00000354363 ZMYND12Q9H0C1 365 aa16.45■□□□□ 0.22
PRPF40A-201ENST00000354363 NID2Q14112 1375 aa16.44■□□□□ 0.22
PRPF40A-201ENST00000354363 PKN1Q16512 942 aa16.44■□□□□ 0.22
PRPF40A-201ENST00000354363 EP400NLQ6ZTU2 488 aa16.44■□□□□ 0.22
PRPF40A-201ENST00000354363 PLVAPQ9BX97 442 aa16.44■□□□□ 0.22
PRPF40A-201ENST00000354363 TMX1Q9H3N1 280 aa16.44■□□□□ 0.22
PRPF40A-201ENST00000354363 ZNF302Q9NR11 478 aa16.44■□□□□ 0.22
PRPF40A-201ENST00000354363 CLDND1Q9NY35 253 aa16.44■□□□□ 0.22
PRPF40A-201ENST00000354363 SNX14Q9Y5W7 946 aa16.44■□□□□ 0.22
PRPF40A-201ENST00000354363 MRPL42Q9Y6G3 142 aaKnown RBP16.44■□□□□ 0.22
PRPF40A-201ENST00000354363 COL1A2P08123 1366 aa16.44■□□□□ 0.22
PRPF40A-201ENST00000354363 IPO5O00410 1097 aaKnown RBP16.43■□□□□ 0.22
PRPF40A-201ENST00000354363 PRPF3O43395 683 aaKnown RBP16.43■□□□□ 0.22
PRPF40A-201ENST00000354363 ATP4AP20648 1035 aa16.43■□□□□ 0.22
PRPF40A-201ENST00000354363 HSPA4P34932 840 aa16.43■□□□□ 0.22
PRPF40A-201ENST00000354363 TMEM266Q2M3C6 531 aa16.43■□□□□ 0.22
PRPF40A-201ENST00000354363 MIS18BP1Q6P0N0 1132 aa16.43■□□□□ 0.22
PRPF40A-201ENST00000354363 PDXDC2PQ6P474 469 aa16.43■□□□□ 0.22
PRPF40A-201ENST00000354363 BLOC1S2Q6QNY1 142 aa16.43■□□□□ 0.22
PRPF40A-201ENST00000354363 CMTR2Q8IYT2 770 aaKnown RBP16.43■□□□□ 0.22
PRPF40A-201ENST00000354363 GJD3Q8N144 294 aa16.43■□□□□ 0.22
PRPF40A-201ENST00000354363 CCDC12Q8WUD4 166 aaPredicted RBP16.43■□□□□ 0.22
PRPF40A-201ENST00000354363 C6orf50Q9HD87 102 aa16.43■□□□□ 0.22
PRPF40A-201ENST00000354363 ZBTB42B2RXF5 422 aa16.42■□□□□ 0.22
PRPF40A-201ENST00000354363 PI4K2BG5E9Z4 385 aa16.42■□□□□ 0.22
PRPF40A-201ENST00000354363 STAG3L1P0CL83 205 aa16.42■□□□□ 0.22
PRPF40A-201ENST00000354363 LTBRP36941 435 aa16.42■□□□□ 0.22
PRPF40A-201ENST00000354363 ZNF484Q5JVG2 852 aa16.42■□□□□ 0.22
PRPF40A-201ENST00000354363 TMEM31Q5JXX7 168 aa16.42■□□□□ 0.22
PRPF40A-201ENST00000354363 MCTP2Q6DN12 878 aa16.42■□□□□ 0.22
PRPF40A-201ENST00000354363 SWSAP1Q6NVH7 229 aa16.42■□□□□ 0.22
PRPF40A-201ENST00000354363 KIAA0319LQ8IZA0 1049 aa16.42■□□□□ 0.22
PRPF40A-201ENST00000354363 REXO1Q8N1G1 1221 aaKnown RBP16.42■□□□□ 0.22
Retrieved 100 of 20,778 RNA–protein pairs in 37.3 ms