RNA–Protein interactions for RNA: ENST00000352818.8

CD44-205, Transcript of CD44 molecule (Indian blood group), humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CD44, Length 1,023 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD44-205ENST00000352818 LZTS2Q9BRK4 669 aa9.32□□□□□ -0.92
CD44-205ENST00000352818 SMOC2Q9H3U7 446 aa9.32□□□□□ -0.92
CD44-205ENST00000352818 MKNK2Q9HBH9 465 aa9.32□□□□□ -0.92
CD44-205ENST00000352818 BRMS1Q9HCU9 246 aa9.32□□□□□ -0.92
CD44-205ENST00000352818 IL17RBQ9NRM6 502 aa9.32□□□□□ -0.92
CD44-205ENST00000352818 CCDC39Q9UFE4 941 aa9.32□□□□□ -0.92
CD44-205ENST00000352818 NAV2Q8IVL1 2488 aa9.31□□□□□ -0.92
CD44-205ENST00000352818 CYSRT1A8MQ03 144 aa9.31□□□□□ -0.92
CD44-205ENST00000352818 NCK2O43639 380 aa9.31□□□□□ -0.92
CD44-205ENST00000352818 ZIC2O95409 532 aaPredicted RBP9.31□□□□□ -0.92
CD44-205ENST00000352818 ADRB1P08588 477 aa9.31□□□□□ -0.92
CD44-205ENST00000352818 LINC00271P0C7V0 271 aa9.31□□□□□ -0.92
CD44-205ENST00000352818 TSPY3P0CV98 308 aa9.31□□□□□ -0.92
CD44-205ENST00000352818 TSPY8P0CW00 308 aa9.31□□□□□ -0.92
CD44-205ENST00000352818 SCG2P13521 617 aa9.31□□□□□ -0.92
CD44-205ENST00000352818 PFKFB1P16118 471 aa9.31□□□□□ -0.92
CD44-205ENST00000352818 SMARCA1P28370 1054 aa9.31□□□□□ -0.92
CD44-205ENST00000352818 CDK8P49336 464 aa9.31□□□□□ -0.92
CD44-205ENST00000352818 PLCD1P51178 756 aa9.31□□□□□ -0.92
CD44-205ENST00000352818 NDUFA8P51970 172 aa9.31□□□□□ -0.92
CD44-205ENST00000352818 GABPAQ06546 454 aa9.31□□□□□ -0.92
CD44-205ENST00000352818 ANO6Q4KMQ2 910 aa9.31□□□□□ -0.92
CD44-205ENST00000352818 ZSCAN30Q86W11 494 aa9.31□□□□□ -0.92
CD44-205ENST00000352818 ZNF444Q8N0Y2 327 aaPredicted RBP9.31□□□□□ -0.92
CD44-205ENST00000352818 SRBD1Q8N5C6 995 aaKnown RBP9.31□□□□□ -0.92
CD44-205ENST00000352818 PNMA1Q8ND90 353 aa9.31□□□□□ -0.92
CD44-205ENST00000352818 DYNLL2Q96FJ2 89 aa9.31□□□□□ -0.92
CD44-205ENST00000352818 RPGRIP1Q96KN7 1286 aa9.31□□□□□ -0.92
CD44-205ENST00000352818 EHD4Q9H223 541 aa9.31□□□□□ -0.92
CD44-205ENST00000352818 PDGFCQ9NRA1 345 aa9.31□□□□□ -0.92
CD44-205ENST00000352818 USP25Q9UHP3 1055 aa9.31□□□□□ -0.92
CD44-205ENST00000352818 KCNJ14Q9UNX9 436 aa9.31□□□□□ -0.92
CD44-205ENST00000352818 USP15Q9Y4E8 981 aaPredicted RBP9.31□□□□□ -0.92
CD44-205ENST00000352818 TANC1Q9C0D5 1861 aa9.31□□□□□ -0.92
CD44-205ENST00000352818 ATG2AQ2TAZ0 1938 aa9.31□□□□□ -0.92
CD44-205ENST00000352818 GRM6O15303 877 aa9.3□□□□□ -0.92
CD44-205ENST00000352818 NMT2O60551 498 aa9.3□□□□□ -0.92
CD44-205ENST00000352818 LGR5O75473 907 aa9.3□□□□□ -0.92
CD44-205ENST00000352818 CALML3P27482 149 aa9.3□□□□□ -0.92
CD44-205ENST00000352818 CLCN1P35523 988 aa9.3□□□□□ -0.92
CD44-205ENST00000352818 TRAPPC10P48553 1259 aa9.3□□□□□ -0.92
CD44-205ENST00000352818 TOB1P50616 345 aaPredicted RBP9.3□□□□□ -0.92
CD44-205ENST00000352818 PURAQ00577 322 aaKnown RBP9.3□□□□□ -0.92
CD44-205ENST00000352818 CAMK1Q14012 370 aa9.3□□□□□ -0.92
CD44-205ENST00000352818 NPY5RQ15761 445 aa9.3□□□□□ -0.92
CD44-205ENST00000352818 TPRNQ4KMQ1 711 aa9.3□□□□□ -0.92
CD44-205ENST00000352818 PPP4R3BQ5MIZ7 849 aa9.3□□□□□ -0.92
CD44-205ENST00000352818 ASTLQ6HA08 431 aaPredicted RBP9.3□□□□□ -0.92
CD44-205ENST00000352818 GALNT17Q6IS24 598 aa9.3□□□□□ -0.92
CD44-205ENST00000352818 CNKSR3Q6P9H4 555 aa9.3□□□□□ -0.92
CD44-205ENST00000352818 TRAF7Q6Q0C0 670 aa9.3□□□□□ -0.92
CD44-205ENST00000352818 TMEM192Q8IY95 271 aa9.3□□□□□ -0.92
CD44-205ENST00000352818 KRI1Q8N9T8 703 aaKnown RBP9.3□□□□□ -0.92
CD44-205ENST00000352818 DAGLBQ8NCG7 672 aa9.3□□□□□ -0.92
CD44-205ENST00000352818 DHX38Q92620 1227 aaKnown RBP9.3□□□□□ -0.92
CD44-205ENST00000352818 BPIFA3Q9BQP9 254 aa9.3□□□□□ -0.92
CD44-205ENST00000352818 PHF7Q9BWX1 381 aaPredicted RBP9.3□□□□□ -0.92
CD44-205ENST00000352818 CBX8Q9HC52 389 aa9.3□□□□□ -0.92
CD44-205ENST00000352818 ANO10Q9NW15 660 aa9.3□□□□□ -0.92
CD44-205ENST00000352818 SWAP70Q9UH65 585 aa9.3□□□□□ -0.92
CD44-205ENST00000352818 SERPINB13Q9UIV8 391 aa9.3□□□□□ -0.92
CD44-205ENST00000352818 FBXO2Q9UK22 296 aaPredicted RBP9.3□□□□□ -0.92
CD44-205ENST00000352818 NOL7Q9UMY1 257 aaKnown RBP9.3□□□□□ -0.92
CD44-205ENST00000352818 INSL6Q9Y581 213 aa9.3□□□□□ -0.92
CD44-205ENST00000352818 COL11A1P12107 1806 aaPredicted RBP9.29□□□□□ -0.92
CD44-205ENST00000352818 PARP14Q460N5 1801 aa9.29□□□□□ -0.92
CD44-205ENST00000352818 IGKV6D-41A0A0C4DH26 115 aa9.29□□□□□ -0.92
CD44-205ENST00000352818 A0A1B0GVL5 298 aa9.29□□□□□ -0.92
CD44-205ENST00000352818 ABHD14A-ACY1A0A1B0GW23 586 aa9.29□□□□□ -0.92
CD44-205ENST00000352818 PALM3A6NDB9 673 aaPredicted RBP9.29□□□□□ -0.92
CD44-205ENST00000352818 PI15O43692 258 aa9.29□□□□□ -0.92
CD44-205ENST00000352818 ZNF202O95125 648 aa9.29□□□□□ -0.92
CD44-205ENST00000352818 GLP2RO95838 553 aa9.29□□□□□ -0.92
CD44-205ENST00000352818 HLA-DOAP06340 250 aa9.29□□□□□ -0.92
CD44-205ENST00000352818 SYKP43405 635 aa9.29□□□□□ -0.92
CD44-205ENST00000352818 ZNF165P49910 485 aa9.29□□□□□ -0.92
CD44-205ENST00000352818 CNTN2Q02246 1040 aa9.29□□□□□ -0.92
CD44-205ENST00000352818 COASYQ13057 564 aa9.29□□□□□ -0.92
CD44-205ENST00000352818 MBTPS1Q14703 1052 aa9.29□□□□□ -0.92
CD44-205ENST00000352818 CWF19L1Q69YN2 538 aaKnown RBP9.29□□□□□ -0.92
CD44-205ENST00000352818 TAPT1Q6NXT6 567 aa9.29□□□□□ -0.92
CD44-205ENST00000352818 SHC4Q6S5L8 630 aa9.29□□□□□ -0.92
CD44-205ENST00000352818 DHX30Q7L2E3 1194 aaKnown RBP eCLIP9.29□□□□□ -0.92
CD44-205ENST00000352818 FBXO11Q86XK2 927 aa9.29□□□□□ -0.92
CD44-205ENST00000352818 CMTR1Q8N1G2 835 aaKnown RBP9.29□□□□□ -0.92
CD44-205ENST00000352818 RETREG2Q8NC44 543 aa9.29□□□□□ -0.92
CD44-205ENST00000352818 SPZ1Q9BXG8 430 aa9.29□□□□□ -0.92
CD44-205ENST00000352818 IGFLR1Q9H665 355 aa9.29□□□□□ -0.92
CD44-205ENST00000352818 RRAGDQ9NQL2 400 aaPredicted RBP9.29□□□□□ -0.92
CD44-205ENST00000352818 VPS54Q9P1Q0 977 aa9.29□□□□□ -0.92
CD44-205ENST00000352818 KIAA1468Q9P260 1216 aa9.29□□□□□ -0.92
CD44-205ENST00000352818 MAD2L2Q9UI95 211 aa9.29□□□□□ -0.92
CD44-205ENST00000352818 PPP1R9AQ9ULJ8 1098 aa9.29□□□□□ -0.92
CD44-205ENST00000352818 SRPRBQ9Y5M8 271 aaKnown RBP9.29□□□□□ -0.92
CD44-205ENST00000352818 R4GN57 208 aa9.29□□□□□ -0.92
CD44-205ENST00000352818 V9GY48 417 aaPredicted RBP9.29□□□□□ -0.92
CD44-205ENST00000352818 MCM3APO60318 1980 aa9.29□□□□□ -0.92
CD44-205ENST00000352818 DCDC2BA2VCK2 349 aa9.28□□□□□ -0.92
CD44-205ENST00000352818 hCG_1984214I3L0E3 225 aa9.28□□□□□ -0.92
CD44-205ENST00000352818 ADCY5O95622 1261 aa9.28□□□□□ -0.92
Retrieved 100 of 20,778 RNA–protein pairs in 15.4 ms