RNA–Protein interactions for RNA: ENST00000339162.11

PDLIM2-203, Transcript of PDZ and LIM domain 2, humanhuman

TSL 1 (best) BASIC

Gene PDLIM2, Length 2,226 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM2-203ENST00000339162 DESI2Q9BSY9 194 aa24.79■■□□□ 1.56
PDLIM2-203ENST00000339162 SPATC1LQ9H0A9 340 aa24.79■■□□□ 1.56
PDLIM2-203ENST00000339162 NDST4Q9H3R1 872 aa24.79■■□□□ 1.56
PDLIM2-203ENST00000339162 KRT9P35527 623 aa24.78■■□□□ 1.56
PDLIM2-203ENST00000339162 HERVK_113P62684 666 aa24.78■■□□□ 1.56
PDLIM2-203ENST00000339162 KNOP1Q1ED39 458 aaKnown RBP24.78■■□□□ 1.56
PDLIM2-203ENST00000339162 ZC2HC1CQ53FD0 456 aaPredicted RBP24.78■■□□□ 1.56
PDLIM2-203ENST00000339162 UTP14CQ5TAP6 766 aaKnown RBP24.78■■□□□ 1.56
PDLIM2-203ENST00000339162 ARMC9Q7Z3E5 817 aa24.78■■□□□ 1.56
PDLIM2-203ENST00000339162 KSR1Q8IVT5 923 aa24.78■■□□□ 1.56
PDLIM2-203ENST00000339162 PARVGQ9HBI0 331 aa24.78■■□□□ 1.56
PDLIM2-203ENST00000339162 ABHD10Q9NUJ1 306 aa24.78■■□□□ 1.56
PDLIM2-203ENST00000339162 RASSF10A6NK89 507 aa24.78■■□□□ 1.56
PDLIM2-203ENST00000339162 PPIL2Q13356 520 aa24.78■■□□□ 1.56
PDLIM2-203ENST00000339162 ADAM9Q13443 819 aa24.78■■□□□ 1.56
PDLIM2-203ENST00000339162 CCDC40Q4G0X9 1142 aa24.78■■□□□ 1.56
PDLIM2-203ENST00000339162 PADI6Q6TGC4 694 aa24.78■■□□□ 1.56
PDLIM2-203ENST00000339162 KCNH4Q9UQ05 1017 aa24.78■■□□□ 1.56
PDLIM2-203ENST00000339162 WDR64B1ANS9 1081 aa24.77■■□□□ 1.56
PDLIM2-203ENST00000339162 MAN2A1Q16706 1144 aa24.77■■□□□ 1.56
PDLIM2-203ENST00000339162 RIOX2Q8IUF8 465 aa24.77■■□□□ 1.56
PDLIM2-203ENST00000339162 CCDC155Q8N6L0 562 aa24.77■■□□□ 1.56
PDLIM2-203ENST00000339162 OLFML3Q9NRN5 406 aa24.77■■□□□ 1.56
PDLIM2-203ENST00000339162 AGTPBP1Q9UPW5 1226 aa24.77■■□□□ 1.56
PDLIM2-203ENST00000339162 KCNA2P16389 499 aa24.77■■□□□ 1.56
PDLIM2-203ENST00000339162 GAP43P17677 238 aa24.77■■□□□ 1.56
PDLIM2-203ENST00000339162 YWHABP31946 246 aaKnown RBP24.77■■□□□ 1.56
PDLIM2-203ENST00000339162 GJA5P36382 358 aa24.77■■□□□ 1.56
PDLIM2-203ENST00000339162 KRT76Q01546 638 aa24.77■■□□□ 1.56
PDLIM2-203ENST00000339162 MOGSQ13724 837 aa24.77■■□□□ 1.56
PDLIM2-203ENST00000339162 FKBP15Q5T1M5 1219 aa24.77■■□□□ 1.56
PDLIM2-203ENST00000339162 FOXR2Q6PJQ5 311 aa24.77■■□□□ 1.56
PDLIM2-203ENST00000339162 RAD9BQ6WBX8 426 aa24.77■■□□□ 1.56
PDLIM2-203ENST00000339162 TXNRD2Q9NNW7 524 aa24.77■■□□□ 1.56
PDLIM2-203ENST00000339162 GRIN3BO60391 1043 aa24.76■■□□□ 1.55
PDLIM2-203ENST00000339162 HIP1RO75146 1068 aa24.76■■□□□ 1.55
PDLIM2-203ENST00000339162 NR2F2P24468 414 aa24.76■■□□□ 1.55
PDLIM2-203ENST00000339162 RARRES1P49788 294 aa24.76■■□□□ 1.55
PDLIM2-203ENST00000339162 TRIM14Q14142 442 aa24.76■■□□□ 1.55
PDLIM2-203ENST00000339162 MOV10L1Q9BXT6 1211 aaKnown RBP24.76■■□□□ 1.55
PDLIM2-203ENST00000339162 PPP2R2CQ9Y2T4 447 aa24.76■■□□□ 1.55
PDLIM2-203ENST00000339162 CNMDO75829 334 aa24.76■■□□□ 1.55
PDLIM2-203ENST00000339162 TRIM21P19474 475 aaKnown RBP24.76■■□□□ 1.55
PDLIM2-203ENST00000339162 ODR4Q5SWX8 454 aa24.76■■□□□ 1.55
PDLIM2-203ENST00000339162 PNMA8AQ86V59 439 aaPredicted RBP24.76■■□□□ 1.55
PDLIM2-203ENST00000339162 DAW1Q8N136 415 aa24.76■■□□□ 1.55
PDLIM2-203ENST00000339162 AGPAT5Q9NUQ2 364 aa24.76■■□□□ 1.55
PDLIM2-203ENST00000339162 LOC285556D6RIA3 1793 aa24.75■■□□□ 1.55
PDLIM2-203ENST00000339162 JAK3P52333 1124 aa24.75■■□□□ 1.55
PDLIM2-203ENST00000339162 PLA2G4FQ68DD2 849 aa24.75■■□□□ 1.55
PDLIM2-203ENST00000339162 FIZ1Q96SL8 496 aa24.75■■□□□ 1.55
PDLIM2-203ENST00000339162 ZC3H4Q9UPT8 1303 aaKnown RBP24.75■■□□□ 1.55
PDLIM2-203ENST00000339162 LCTP09848 1927 aa24.75■■□□□ 1.55
PDLIM2-203ENST00000339162 USO1O60763 962 aaKnown RBP24.74■■□□□ 1.55
PDLIM2-203ENST00000339162 GUCY2CP25092 1073 aa24.74■■□□□ 1.55
PDLIM2-203ENST00000339162 ZNF131P52739 623 aa24.74■■□□□ 1.55
PDLIM2-203ENST00000339162 MAPK7Q13164 816 aa24.74■■□□□ 1.55
PDLIM2-203ENST00000339162 REXO1L1PQ8IX06 675 aa24.74■■□□□ 1.55
PDLIM2-203ENST00000339162 FAM178BQ8IXR5 827 aa24.74■■□□□ 1.55
PDLIM2-203ENST00000339162 CEP63Q96MT8 703 aa24.74■■□□□ 1.55
PDLIM2-203ENST00000339162 KCND2Q9NZV8 630 aa24.74■■□□□ 1.55
PDLIM2-203ENST00000339162 LUC7L2Q9Y383 392 aaKnown RBP24.74■■□□□ 1.55
PDLIM2-203ENST00000339162 KIAA1217Q5T5P2 1943 aa24.74■■□□□ 1.55
PDLIM2-203ENST00000339162 CLIC2O15247 247 aa24.74■■□□□ 1.55
PDLIM2-203ENST00000339162 MAFGO15525 162 aa24.74■■□□□ 1.55
PDLIM2-203ENST00000339162 SFNP31947 248 aa24.74■■□□□ 1.55
PDLIM2-203ENST00000339162 NPEPPSP55786 919 aa24.74■■□□□ 1.55
PDLIM2-203ENST00000339162 PSMC5P62195 406 aa24.74■■□□□ 1.55
PDLIM2-203ENST00000339162 ERVK-24P63145 666 aa24.74■■□□□ 1.55
PDLIM2-203ENST00000339162 SP2Q02086 613 aa24.74■■□□□ 1.55
PDLIM2-203ENST00000339162 EDRF1Q3B7T1 1238 aa24.74■■□□□ 1.55
PDLIM2-203ENST00000339162 Q3C1V9 767 aa24.74■■□□□ 1.55
PDLIM2-203ENST00000339162 CCDC51Q96ER9 411 aa24.74■■□□□ 1.55
PDLIM2-203ENST00000339162 ERGIC2Q96RQ1 377 aa24.74■■□□□ 1.55
PDLIM2-203ENST00000339162 ODF2LQ9ULJ1 636 aa24.74■■□□□ 1.55
PDLIM2-203ENST00000339162 TRAF3IP3Q9Y228 551 aa24.74■■□□□ 1.55
PDLIM2-203ENST00000339162 BACH1O14867 736 aa24.73■■□□□ 1.55
PDLIM2-203ENST00000339162 STXBP2Q15833 593 aa24.73■■□□□ 1.55
PDLIM2-203ENST00000339162 BMT2Q1RMZ1 405 aa24.73■■□□□ 1.55
PDLIM2-203ENST00000339162 LDLRAD1Q5T700 205 aa24.73■■□□□ 1.55
PDLIM2-203ENST00000339162 SEPT14Q6ZU15 432 aa24.73■■□□□ 1.55
PDLIM2-203ENST00000339162 SMCR8Q8TEV9 937 aaPredicted RBP24.73■■□□□ 1.55
PDLIM2-203ENST00000339162 CCDC43Q96MW1 224 aaKnown RBP24.73■■□□□ 1.55
PDLIM2-203ENST00000339162 TTYH3Q9C0H2 523 aa24.73■■□□□ 1.55
PDLIM2-203ENST00000339162 RBPJLQ9UBG7 517 aa24.73■■□□□ 1.55
PDLIM2-203ENST00000339162 CAPN11Q9UMQ6 739 aa24.73■■□□□ 1.55
PDLIM2-203ENST00000339162 PCDHA10Q9Y5I2 948 aa24.73■■□□□ 1.55
PDLIM2-203ENST00000339162 CETN3O15182 167 aa24.73■■□□□ 1.55
PDLIM2-203ENST00000339162 ALDH5A1P51649 535 aaPredicted RBP24.73■■□□□ 1.55
PDLIM2-203ENST00000339162 MKRN3Q13064 507 aaKnown RBP24.73■■□□□ 1.55
PDLIM2-203ENST00000339162 ZNF746Q6NUN9 644 aaPredicted RBP24.73■■□□□ 1.55
PDLIM2-203ENST00000339162 PPP4R3CPQ6ZMV5 832 aa24.73■■□□□ 1.55
PDLIM2-203ENST00000339162 ZNF720Q7Z2F6 126 aa24.73■■□□□ 1.55
PDLIM2-203ENST00000339162 C4orf19Q8IY42 314 aa24.73■■□□□ 1.55
PDLIM2-203ENST00000339162 SLC10A4Q96EP9 437 aa24.73■■□□□ 1.55
PDLIM2-203ENST00000339162 NAA15Q9BXJ9 866 aaKnown RBP24.73■■□□□ 1.55
PDLIM2-203ENST00000339162 FAM207AQ9NSI2 230 aaPredicted RBP24.73■■□□□ 1.55
PDLIM2-203ENST00000339162 GABBR1Q9UBS5 961 aa24.73■■□□□ 1.55
PDLIM2-203ENST00000339162 FBXO40Q9UH90 709 aa24.73■■□□□ 1.55
PDLIM2-203ENST00000339162 DBR1Q9UK59 544 aaKnown RBP24.73■■□□□ 1.55
Retrieved 100 of 20,778 RNA–protein pairs in 21.5 ms