RNA–Protein interactions for RNA: ENST00000332853.8

VSTM4-202, Transcript of V-set and transmembrane domain containing 4, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene VSTM4, Length 6,392 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VSTM4-202ENST00000332853 IQCB1Q15051 598 aa14.1□□□□□ -0.15
VSTM4-202ENST00000332853 GEN1Q17RS7 908 aa14.1□□□□□ -0.15
VSTM4-202ENST00000332853 TRIM50Q86XT4 487 aa14.1□□□□□ -0.15
VSTM4-202ENST00000332853 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP14.1□□□□□ -0.15
VSTM4-202ENST00000332853 SH2D3AQ9BRG2 576 aa14.1□□□□□ -0.15
VSTM4-202ENST00000332853 STXBP3O00186 592 aa14.1□□□□□ -0.15
VSTM4-202ENST00000332853 C16orf86Q6ZW13 317 aa14.1□□□□□ -0.15
VSTM4-202ENST00000332853 HACE1Q8IYU2 909 aa14.1□□□□□ -0.15
VSTM4-202ENST00000332853 K7ERI5 159 aa14.1□□□□□ -0.15
VSTM4-202ENST00000332853 PGRMC1O00264 195 aaKnown RBP14.1□□□□□ -0.15
VSTM4-202ENST00000332853 PLTPP55058 493 aa14.1□□□□□ -0.15
VSTM4-202ENST00000332853 BPIFB4P59827 614 aa14.1□□□□□ -0.15
VSTM4-202ENST00000332853 ZNF543Q08ER8 600 aa14.1□□□□□ -0.15
VSTM4-202ENST00000332853 SPOUT1Q5T280 376 aaKnown RBP14.1□□□□□ -0.15
VSTM4-202ENST00000332853 RFX6Q8HWS3 928 aa14.1□□□□□ -0.15
VSTM4-202ENST00000332853 RIOK1Q9BRS2 568 aaKnown RBP14.1□□□□□ -0.15
VSTM4-202ENST00000332853 SPZ1Q9BXG8 430 aa14.1□□□□□ -0.15
VSTM4-202ENST00000332853 RNF146Q9NTX7 359 aa14.1□□□□□ -0.15
VSTM4-202ENST00000332853 SGK1O00141 431 aa14.1□□□□□ -0.15
VSTM4-202ENST00000332853 RASSF4Q9H2L5 321 aa14.1□□□□□ -0.15
VSTM4-202ENST00000332853 STX2P32856 288 aa14.09□□□□□ -0.15
VSTM4-202ENST00000332853 PSMC4P43686 418 aa14.09□□□□□ -0.15
VSTM4-202ENST00000332853 KNOP1Q1ED39 458 aaKnown RBP14.09□□□□□ -0.15
VSTM4-202ENST00000332853 FAM71BQ8TC56 605 aa14.09□□□□□ -0.15
VSTM4-202ENST00000332853 FAM20AQ96MK3 541 aa14.09□□□□□ -0.15
VSTM4-202ENST00000332853 LXNQ9BS40 222 aa14.09□□□□□ -0.15
VSTM4-202ENST00000332853 ABCB6Q9NP58 842 aa14.09□□□□□ -0.15
VSTM4-202ENST00000332853 PODXL2Q9NZ53 605 aa14.09□□□□□ -0.15
VSTM4-202ENST00000332853 FAN1Q9Y2M0 1017 aa14.09□□□□□ -0.15
VSTM4-202ENST00000332853 ATP8A1Q9Y2Q0 1164 aa14.09□□□□□ -0.15
VSTM4-202ENST00000332853 PASKQ96RG2 1323 aa14.09□□□□□ -0.15
VSTM4-202ENST00000332853 CNTNAP4Q9C0A0 1308 aa14.09□□□□□ -0.15
VSTM4-202ENST00000332853 PVALEFA0A1B0GWK0 134 aa14.09□□□□□ -0.15
VSTM4-202ENST00000332853 POLR2BP30876 1174 aaKnown RBP14.09□□□□□ -0.15
VSTM4-202ENST00000332853 ADGRA1Q86SQ6 560 aa14.09□□□□□ -0.15
VSTM4-202ENST00000332853 HDAC6Q9UBN7 1215 aa14.09□□□□□ -0.15
VSTM4-202ENST00000332853 RNF8O76064 485 aa14.09□□□□□ -0.15
VSTM4-202ENST00000332853 ZNF394Q53GI3 561 aa14.09□□□□□ -0.15
VSTM4-202ENST00000332853 CEP72Q9P209 647 aa14.09□□□□□ -0.15
VSTM4-202ENST00000332853 IPO5O00410 1097 aaKnown RBP14.09□□□□□ -0.15
VSTM4-202ENST00000332853 PDHBP11177 359 aa14.09□□□□□ -0.15
VSTM4-202ENST00000332853 SGO2Q562F6 1265 aa14.09□□□□□ -0.15
VSTM4-202ENST00000332853 PALM3A6NDB9 673 aaPredicted RBP14.09□□□□□ -0.15
VSTM4-202ENST00000332853 H7C0C1 242 aa14.09□□□□□ -0.15
VSTM4-202ENST00000332853 NCK2O43639 380 aa14.09□□□□□ -0.15
VSTM4-202ENST00000332853 ATP5OP48047 213 aa14.09□□□□□ -0.15
VSTM4-202ENST00000332853 DPYDQ12882 1025 aa14.09□□□□□ -0.15
VSTM4-202ENST00000332853 SWSAP1Q6NVH7 229 aa14.09□□□□□ -0.15
VSTM4-202ENST00000332853 NME8Q8N427 588 aa14.09□□□□□ -0.15
VSTM4-202ENST00000332853 C7orf31Q8N865 590 aa14.09□□□□□ -0.15
VSTM4-202ENST00000332853 STIM2Q9P246 746 aa14.08□□□□□ -0.15
VSTM4-202ENST00000332853 DAAM1Q9Y4D1 1078 aa14.08□□□□□ -0.15
VSTM4-202ENST00000332853 GTF2A1P52655 376 aaPredicted RBP14.08□□□□□ -0.16
VSTM4-202ENST00000332853 CROCCP2Q86T23 111 aa14.08□□□□□ -0.16
VSTM4-202ENST00000332853 TMEM60Q9H2L4 133 aa14.08□□□□□ -0.16
VSTM4-202ENST00000332853 SDAD1Q9NVU7 687 aaKnown RBP eCLIP14.08□□□□□ -0.16
VSTM4-202ENST00000332853 MAN1A1P33908 653 aa14.08□□□□□ -0.16
VSTM4-202ENST00000332853 JAK3P52333 1124 aa14.08□□□□□ -0.16
VSTM4-202ENST00000332853 PPP2R5EQ16537 467 aa14.08□□□□□ -0.16
VSTM4-202ENST00000332853 LDHDQ86WU2 507 aa14.08□□□□□ -0.16
VSTM4-202ENST00000332853 RPAP3Q9H6T3 665 aaPredicted RBP14.08□□□□□ -0.16
VSTM4-202ENST00000332853 GABBR1Q9UBS5 961 aa14.08□□□□□ -0.16
VSTM4-202ENST00000332853 STRIP1Q5VSL9 837 aa14.08□□□□□ -0.16
VSTM4-202ENST00000332853 PASD1Q8IV76 773 aa14.08□□□□□ -0.16
VSTM4-202ENST00000332853 THNSL1Q8IYQ7 743 aa14.08□□□□□ -0.16
VSTM4-202ENST00000332853 POC1B-GALNT4F8VUJ3 575 aa14.08□□□□□ -0.16
VSTM4-202ENST00000332853 C3orf67Q6ZVT6 689 aa14.08□□□□□ -0.16
VSTM4-202ENST00000332853 TXNRD3Q86VQ6 643 aa14.08□□□□□ -0.16
VSTM4-202ENST00000332853 VSIG1Q86XK7 387 aa14.08□□□□□ -0.16
VSTM4-202ENST00000332853 CCDC125Q86Z20 511 aa14.08□□□□□ -0.16
VSTM4-202ENST00000332853 GSPT2Q8IYD1 628 aaKnown RBP14.08□□□□□ -0.16
VSTM4-202ENST00000332853 SLC10A4Q96EP9 437 aa14.08□□□□□ -0.16
VSTM4-202ENST00000332853 FAM213AQ9BRX8 229 aa14.08□□□□□ -0.16
VSTM4-202ENST00000332853 RNF40O75150 1001 aa14.07□□□□□ -0.16
VSTM4-202ENST00000332853 GABPAQ06546 454 aa14.07□□□□□ -0.16
VSTM4-202ENST00000332853 CCDC117Q8IWD4 279 aaPredicted RBP14.07□□□□□ -0.16
VSTM4-202ENST00000332853 SAAL1Q96ER3 474 aa14.07□□□□□ -0.16
VSTM4-202ENST00000332853 MAD2L2Q9UI95 211 aa14.07□□□□□ -0.16
VSTM4-202ENST00000332853 ZNF233A6NK53 670 aa14.07□□□□□ -0.16
VSTM4-202ENST00000332853 NDUFB10O96000 172 aa14.07□□□□□ -0.16
VSTM4-202ENST00000332853 MTMR2Q13614 643 aa14.07□□□□□ -0.16
VSTM4-202ENST00000332853 PROM2Q8N271 834 aa14.07□□□□□ -0.16
VSTM4-202ENST00000332853 BCAS4Q8TDM0 211 aa14.07□□□□□ -0.16
VSTM4-202ENST00000332853 KRT1P04264 644 aa14.07□□□□□ -0.16
VSTM4-202ENST00000332853 EPHB4P54760 987 aa14.07□□□□□ -0.16
VSTM4-202ENST00000332853 STXBP2Q15833 593 aa14.07□□□□□ -0.16
VSTM4-202ENST00000332853 PRAMEF18Q5VWM3 479 aa14.07□□□□□ -0.16
VSTM4-202ENST00000332853 RPUSD2Q8IZ73 545 aaKnown RBP14.07□□□□□ -0.16
VSTM4-202ENST00000332853 SUGT1Q9Y2Z0 365 aa14.07□□□□□ -0.16
VSTM4-202ENST00000332853 WDR64B1ANS9 1081 aa14.07□□□□□ -0.16
VSTM4-202ENST00000332853 CYFIP1Q7L576 1253 aa14.07□□□□□ -0.16
VSTM4-202ENST00000332853 CERKQ8TCT0 537 aa14.07□□□□□ -0.16
VSTM4-202ENST00000332853 MED4Q9NPJ6 270 aa14.07□□□□□ -0.16
VSTM4-202ENST00000332853 PACSIN2Q9UNF0 486 aaPredicted RBP14.07□□□□□ -0.16
VSTM4-202ENST00000332853 ATP6V0A4Q9HBG4 840 aa14.07□□□□□ -0.16
VSTM4-202ENST00000332853 NCOA3Q9Y6Q9 1424 aa14.07□□□□□ -0.16
VSTM4-202ENST00000332853 DENND3A2RUS2 1198 aa14.06□□□□□ -0.16
VSTM4-202ENST00000332853 NMT1P30419 496 aaKnown RBP14.06□□□□□ -0.16
VSTM4-202ENST00000332853 SSTR3P32745 418 aaPredicted RBP14.06□□□□□ -0.16
VSTM4-202ENST00000332853 USP11P51784 963 aa14.06□□□□□ -0.16
Retrieved 100 of 20,778 RNA–protein pairs in 29 ms