RNA–Protein interactions for RNA: ENST00000330045.11

BRCC3-201, Transcript of BRCA1/BRCA2-containing complex subunit 3, humanhuman

TSL 1 (best) BASIC

Gene BRCC3, Length 2,496 nt, Biotype protein coding, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCC3-201ENST00000330045 FAM153BP0C7A2 387 aa16.84■□□□□ 0.29
BRCC3-201ENST00000330045 DPEP1P16444 411 aa16.84■□□□□ 0.29
BRCC3-201ENST00000330045 SLC9A1P19634 815 aa16.84■□□□□ 0.29
BRCC3-201ENST00000330045 KCNA3P22001 575 aa16.84■□□□□ 0.29
BRCC3-201ENST00000330045 RNASE9P60153 205 aaKnown RBP16.84■□□□□ 0.29
BRCC3-201ENST00000330045 PSMC6P62333 389 aa16.84■□□□□ 0.29
BRCC3-201ENST00000330045 GNGT1P63211 74 aa16.84■□□□□ 0.29
BRCC3-201ENST00000330045 ARHGAP4P98171 946 aa16.84■□□□□ 0.29
BRCC3-201ENST00000330045 SPIRE1Q08AE8 756 aa16.84■□□□□ 0.29
BRCC3-201ENST00000330045 CDC37Q16543 378 aaPredicted RBP16.84■□□□□ 0.29
BRCC3-201ENST00000330045 KNOP1Q1ED39 458 aaKnown RBP16.84■□□□□ 0.29
BRCC3-201ENST00000330045 FAM153CQ494X1 144 aa16.84■□□□□ 0.29
BRCC3-201ENST00000330045 APOBEC3HQ6NTF7 200 aaKnown RBP16.84■□□□□ 0.29
BRCC3-201ENST00000330045 CNKSR1Q969H4 720 aa16.84■□□□□ 0.29
BRCC3-201ENST00000330045 SPAG5Q96R06 1193 aa16.84■□□□□ 0.29
BRCC3-201ENST00000330045 FAM153AQ9UHL3 310 aa16.84■□□□□ 0.29
BRCC3-201ENST00000330045 DNM3Q9UQ16 869 aa16.84■□□□□ 0.29
BRCC3-201ENST00000330045 YDJCA8MPS7 323 aa16.83■□□□□ 0.28
BRCC3-201ENST00000330045 ANKRD65E5RJM6 399 aa16.83■□□□□ 0.28
BRCC3-201ENST00000330045 EIF3HO15372 352 aaKnown RBP eCLIP16.83■□□□□ 0.28
BRCC3-201ENST00000330045 AFPP02771 609 aaKnown RBP16.83■□□□□ 0.28
BRCC3-201ENST00000330045 UCHL3P15374 230 aa16.83■□□□□ 0.28
BRCC3-201ENST00000330045 PABPC4Q13310 644 aaKnown RBP eCLIP16.83■□□□□ 0.28
BRCC3-201ENST00000330045 AP3B2Q13367 1082 aa16.83■□□□□ 0.28
BRCC3-201ENST00000330045 PRR16Q569H4 304 aa16.83■□□□□ 0.28
BRCC3-201ENST00000330045 CFAP58Q5T655 872 aa16.83■□□□□ 0.28
BRCC3-201ENST00000330045 DPY19L2P1Q6NXN4 242 aa16.83■□□□□ 0.28
BRCC3-201ENST00000330045 ZNF571Q7Z3V5 609 aaPredicted RBP16.83■□□□□ 0.28
BRCC3-201ENST00000330045 IQCKQ8N0W5 287 aa16.83■□□□□ 0.28
BRCC3-201ENST00000330045 SYT2Q8N9I0 419 aaPredicted RBP16.83■□□□□ 0.28
BRCC3-201ENST00000330045 USP38Q8NB14 1042 aa16.83■□□□□ 0.28
BRCC3-201ENST00000330045 ERMNQ8TAM6 284 aa16.83■□□□□ 0.28
BRCC3-201ENST00000330045 ETNPPLQ8TBG4 499 aa16.83■□□□□ 0.28
BRCC3-201ENST00000330045 TAF4BQ92750 862 aa16.83■□□□□ 0.28
BRCC3-201ENST00000330045 CCDC43Q96MW1 224 aaKnown RBP16.83■□□□□ 0.28
BRCC3-201ENST00000330045 BZW2Q9Y6E2 419 aaKnown RBP16.83■□□□□ 0.28
BRCC3-201ENST00000330045 MEIS1O00470 390 aa16.82■□□□□ 0.28
BRCC3-201ENST00000330045 CLSTN1O94985 981 aa16.82■□□□□ 0.28
BRCC3-201ENST00000330045 EEF2P13639 858 aaKnown RBP16.82■□□□□ 0.28
BRCC3-201ENST00000330045 RPA1P27694 616 aa16.82■□□□□ 0.28
BRCC3-201ENST00000330045 EXOC3L4Q17RC7 722 aa16.82■□□□□ 0.28
BRCC3-201ENST00000330045 DACT2Q5SW24 774 aa16.82■□□□□ 0.28
BRCC3-201ENST00000330045 HHIPL2Q6UWX4 724 aa16.82■□□□□ 0.28
BRCC3-201ENST00000330045 DCAF4Q8WV16 495 aa16.82■□□□□ 0.28
BRCC3-201ENST00000330045 EHD4Q9H223 541 aa16.82■□□□□ 0.28
BRCC3-201ENST00000330045 CES2O00748 559 aa16.82■□□□□ 0.28
BRCC3-201ENST00000330045 KRT14P02533 472 aa16.82■□□□□ 0.28
BRCC3-201ENST00000330045 CCT5P48643 541 aa16.82■□□□□ 0.28
BRCC3-201ENST00000330045 TNNC1P63316 161 aa16.82■□□□□ 0.28
BRCC3-201ENST00000330045 SKOR1P84550 965 aa16.82■□□□□ 0.28
BRCC3-201ENST00000330045 RPS6KA1Q15418 735 aa16.82■□□□□ 0.28
BRCC3-201ENST00000330045 SLFN13Q68D06 897 aa16.82■□□□□ 0.28
BRCC3-201ENST00000330045 EPM2AIP1Q7L775 607 aaPredicted RBP16.82■□□□□ 0.28
BRCC3-201ENST00000330045 SFR1Q86XK3 245 aa16.82■□□□□ 0.28
BRCC3-201ENST00000330045 BCAS4Q8TDM0 211 aa16.82■□□□□ 0.28
BRCC3-201ENST00000330045 CASKIN2Q8WXE0 1202 aa16.82■□□□□ 0.28
BRCC3-201ENST00000330045 CRYGNQ8WXF5 182 aa16.82■□□□□ 0.28
BRCC3-201ENST00000330045 TEKT1Q969V4 418 aa16.82■□□□□ 0.28
BRCC3-201ENST00000330045 MKL1Q969V6 931 aa16.82■□□□□ 0.28
BRCC3-201ENST00000330045 REEP2Q9BRK0 252 aa16.82■□□□□ 0.28
BRCC3-201ENST00000330045 GRIN2DO15399 1336 aa16.82■□□□□ 0.28
BRCC3-201ENST00000330045 A6NNZ2 444 aa16.81■□□□□ 0.28
BRCC3-201ENST00000330045 KCNK3O14649 394 aa16.81■□□□□ 0.28
BRCC3-201ENST00000330045 TBX3O15119 743 aa16.81■□□□□ 0.28
BRCC3-201ENST00000330045 CALUO43852 315 aaPredicted RBP16.81■□□□□ 0.28
BRCC3-201ENST00000330045 SPATA31C1P0DKV0 1188 aa16.81■□□□□ 0.28
BRCC3-201ENST00000330045 XRCC5P13010 732 aaKnown RBP16.81■□□□□ 0.28
BRCC3-201ENST00000330045 PON1P27169 355 aa16.81■□□□□ 0.28
BRCC3-201ENST00000330045 HOXD13P35453 343 aa16.81■□□□□ 0.28
BRCC3-201ENST00000330045 TUBB8Q3ZCM7 444 aa16.81■□□□□ 0.28
BRCC3-201ENST00000330045 PODNQ7Z5L7 613 aa16.81■□□□□ 0.28
BRCC3-201ENST00000330045 MREGQ8N565 214 aa16.81■□□□□ 0.28
BRCC3-201ENST00000330045 DNAJC18Q9H819 358 aa16.81■□□□□ 0.28
BRCC3-201ENST00000330045 PDXKO00764 312 aa16.81■□□□□ 0.28
BRCC3-201ENST00000330045 CRKP46108 304 aa16.81■□□□□ 0.28
BRCC3-201ENST00000330045 GUCY2FP51841 1108 aa16.81■□□□□ 0.28
BRCC3-201ENST00000330045 IFI16Q16666 785 aaKnown RBP16.81■□□□□ 0.28
BRCC3-201ENST00000330045 Q4G0T1 1027 aa16.81■□□□□ 0.28
BRCC3-201ENST00000330045 P2RX7Q99572 595 aaKnown RBP16.81■□□□□ 0.28
BRCC3-201ENST00000330045 NYAP2Q9P242 653 aa16.81■□□□□ 0.28
BRCC3-201ENST00000330045 NAGPAQ9UK23 515 aa16.81■□□□□ 0.28
BRCC3-201ENST00000330045 TMEM59LQ9UK28 342 aa16.81■□□□□ 0.28
BRCC3-201ENST00000330045 FAM196BA6NMK8 535 aa16.8■□□□□ 0.28
BRCC3-201ENST00000330045 RAD51CO43502 376 aa16.8■□□□□ 0.28
BRCC3-201ENST00000330045 MYBP10242 640 aa16.8■□□□□ 0.28
BRCC3-201ENST00000330045 NOP2P46087 812 aaKnown RBP16.8■□□□□ 0.28
BRCC3-201ENST00000330045 SHROOM1Q2M3G4 852 aaPredicted RBP16.8■□□□□ 0.28
BRCC3-201ENST00000330045 DCAF17Q5H9S7 520 aaPredicted RBP16.8■□□□□ 0.28
BRCC3-201ENST00000330045 TTC19Q6DKK2 380 aaPredicted RBP16.8■□□□□ 0.28
BRCC3-201ENST00000330045 KLHL7Q8IXQ5 586 aa16.8■□□□□ 0.28
BRCC3-201ENST00000330045 WHAMMQ8TF30 809 aa16.8■□□□□ 0.28
BRCC3-201ENST00000330045 BBXQ8WY36 941 aaPredicted RBP16.8■□□□□ 0.28
BRCC3-201ENST00000330045 SIPA1L1O43166 1804 aa16.8■□□□□ 0.28
BRCC3-201ENST00000330045 KIF13BQ9NQT8 1826 aa16.8■□□□□ 0.28
BRCC3-201ENST00000330045 SHTN1A0MZ66 631 aa16.8■□□□□ 0.28
BRCC3-201ENST00000330045 ZNF233A6NK53 670 aa16.8■□□□□ 0.28
BRCC3-201ENST00000330045 EBAG9O00559 213 aa16.8■□□□□ 0.28
BRCC3-201ENST00000330045 PPIP5K2O43314 1243 aa16.8■□□□□ 0.28
BRCC3-201ENST00000330045 AKAP3O75969 853 aa16.8■□□□□ 0.28
BRCC3-201ENST00000330045 KIF4AO95239 1232 aa16.8■□□□□ 0.28
Retrieved 100 of 20,778 RNA–protein pairs in 24.2 ms