RNA–Protein interactions for RNA: ENST00000321117.9

DNMT3A-202, Transcript of DNA methyltransferase 3 alpha, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene DNMT3A, Length 4,279 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DNMT3A-202ENST00000321117 CHMP6Q96FZ7 201 aa13.83□□□□□ -0.2
DNMT3A-202ENST00000321117 ANO3Q9BYT9 981 aa13.83□□□□□ -0.2
DNMT3A-202ENST00000321117 GOLPH3Q9H4A6 298 aa13.83□□□□□ -0.2
DNMT3A-202ENST00000321117 KDM3BQ7LBC6 1761 aa13.83□□□□□ -0.2
DNMT3A-202ENST00000321117 MED1Q15648 1581 aaPredicted RBP13.83□□□□□ -0.2
DNMT3A-202ENST00000321117 ZSCAN5CA6NGD5 496 aaPredicted RBP13.83□□□□□ -0.2
DNMT3A-202ENST00000321117 FOSP01100 380 aaPredicted RBP13.83□□□□□ -0.2
DNMT3A-202ENST00000321117 NR3C1P04150 777 aa13.83□□□□□ -0.2
DNMT3A-202ENST00000321117 TMOD1P28289 359 aa13.83□□□□□ -0.2
DNMT3A-202ENST00000321117 ADCY2Q08462 1091 aa13.83□□□□□ -0.2
DNMT3A-202ENST00000321117 ZKSCAN8Q15776 578 aaPredicted RBP13.83□□□□□ -0.2
DNMT3A-202ENST00000321117 KNOP1Q1ED39 458 aaKnown RBP13.83□□□□□ -0.2
DNMT3A-202ENST00000321117 ZNF662Q6ZS27 426 aa13.83□□□□□ -0.2
DNMT3A-202ENST00000321117 SYN2Q92777 582 aaPredicted RBP13.83□□□□□ -0.2
DNMT3A-202ENST00000321117 P3H4Q92791 437 aa13.83□□□□□ -0.2
DNMT3A-202ENST00000321117 MRRFQ96E11 262 aaKnown RBP13.83□□□□□ -0.2
DNMT3A-202ENST00000321117 GPR101Q96P66 508 aaPredicted RBP13.83□□□□□ -0.2
DNMT3A-202ENST00000321117 AMNQ9BXJ7 453 aa13.83□□□□□ -0.2
DNMT3A-202ENST00000321117 THAP12O43422 761 aa13.82□□□□□ -0.2
DNMT3A-202ENST00000321117 SLMAPQ14BN4 828 aa13.82□□□□□ -0.2
DNMT3A-202ENST00000321117 LLGL1Q15334 1064 aa13.82□□□□□ -0.2
DNMT3A-202ENST00000321117 IL17AQ16552 155 aa13.82□□□□□ -0.2
DNMT3A-202ENST00000321117 NBPF9Q3BBW0 867 aa13.82□□□□□ -0.2
DNMT3A-202ENST00000321117 PARP9Q8IXQ6 854 aa13.82□□□□□ -0.2
DNMT3A-202ENST00000321117 KIAA0895Q8NCT3 520 aa13.82□□□□□ -0.2
DNMT3A-202ENST00000321117 MAIP1Q8WWC4 291 aa13.82□□□□□ -0.2
DNMT3A-202ENST00000321117 DDX39AO00148 427 aaKnown RBP13.82□□□□□ -0.2
DNMT3A-202ENST00000321117 TTI1O43156 1089 aa13.82□□□□□ -0.2
DNMT3A-202ENST00000321117 ACTN1P12814 892 aa13.82□□□□□ -0.2
DNMT3A-202ENST00000321117 FUT2Q10981 343 aa13.82□□□□□ -0.2
DNMT3A-202ENST00000321117 GRB10Q13322 594 aa13.82□□□□□ -0.2
DNMT3A-202ENST00000321117 KLHDC7AQ5VTJ3 777 aa13.82□□□□□ -0.2
DNMT3A-202ENST00000321117 BANK1Q8NDB2 785 aa13.82□□□□□ -0.2
DNMT3A-202ENST00000321117 SRP68Q9UHB9 627 aaKnown RBP13.82□□□□□ -0.2
DNMT3A-202ENST00000321117 POTEFA5A3E0 1075 aa13.82□□□□□ -0.2
DNMT3A-202ENST00000321117 USP17L15C9J2P7 530 aa13.82□□□□□ -0.2
DNMT3A-202ENST00000321117 USP17L13C9JLJ4 530 aa13.82□□□□□ -0.2
DNMT3A-202ENST00000321117 USP17L11C9JVI0 530 aa13.82□□□□□ -0.2
DNMT3A-202ENST00000321117 USP17L18D6R9N7 530 aa13.82□□□□□ -0.2
DNMT3A-202ENST00000321117 USP17L22D6RA61 530 aa13.82□□□□□ -0.2
DNMT3A-202ENST00000321117 USP17L17D6RBQ6 530 aa13.82□□□□□ -0.2
DNMT3A-202ENST00000321117 USP17L19D6RCP7 530 aa13.82□□□□□ -0.2
DNMT3A-202ENST00000321117 USP17L20D6RJB6 530 aa13.82□□□□□ -0.2
DNMT3A-202ENST00000321117 POTEIP0CG38 1075 aa13.82□□□□□ -0.2
DNMT3A-202ENST00000321117 USP17L24Q0WX57 530 aa13.82□□□□□ -0.2
DNMT3A-202ENST00000321117 ZNF211Q13398 564 aaPredicted RBP13.82□□□□□ -0.2
DNMT3A-202ENST00000321117 USP17L6PQ6QN14 398 aa13.82□□□□□ -0.2
DNMT3A-202ENST00000321117 POTEGQ6S5H5 508 aa13.82□□□□□ -0.2
DNMT3A-202ENST00000321117 POTEEQ6S8J3 1075 aa13.82□□□□□ -0.2
DNMT3A-202ENST00000321117 CEP128Q6ZU80 1094 aa13.82□□□□□ -0.2
DNMT3A-202ENST00000321117 PPM1KQ8N3J5 372 aa13.82□□□□□ -0.2
DNMT3A-202ENST00000321117 MTRQ99707 1265 aa13.82□□□□□ -0.2
DNMT3A-202ENST00000321117 DNAJC12Q9UKB3 198 aa13.82□□□□□ -0.2
DNMT3A-202ENST00000321117 KLRC4O43908 158 aa13.81□□□□□ -0.2
DNMT3A-202ENST00000321117 HIP1RO75146 1068 aa13.81□□□□□ -0.2
DNMT3A-202ENST00000321117 UCHL3P15374 230 aa13.81□□□□□ -0.2
DNMT3A-202ENST00000321117 KRT15P19012 456 aa13.81□□□□□ -0.2
DNMT3A-202ENST00000321117 RASA1P20936 1047 aa13.81□□□□□ -0.2
DNMT3A-202ENST00000321117 HSD17B3P37058 310 aa13.81□□□□□ -0.2
DNMT3A-202ENST00000321117 ADCY8P40145 1251 aa13.81□□□□□ -0.2
DNMT3A-202ENST00000321117 USP11P51784 963 aa13.81□□□□□ -0.2
DNMT3A-202ENST00000321117 DIS3Q9Y2L1 958 aaKnown RBP13.81□□□□□ -0.2
DNMT3A-202ENST00000321117 LMO7Q8WWI1 1683 aa13.81□□□□□ -0.2
DNMT3A-202ENST00000321117 PMS2P54278 862 aa13.81□□□□□ -0.2
DNMT3A-202ENST00000321117 C6orf163Q5TEZ5 329 aa13.81□□□□□ -0.2
DNMT3A-202ENST00000321117 ABCC6O95255 1503 aa13.81□□□□□ -0.2
DNMT3A-202ENST00000321117 FXR2P51116 673 aaKnown RBP eCLIP13.81□□□□□ -0.2
DNMT3A-202ENST00000321117 SCNN1DP51172 638 aa13.81□□□□□ -0.2
DNMT3A-202ENST00000321117 PTK2Q05397 1052 aa13.81□□□□□ -0.2
DNMT3A-202ENST00000321117 LMNTD2Q8IXW0 634 aa13.81□□□□□ -0.2
DNMT3A-202ENST00000321117 CALR3Q96L12 384 aaKnown RBP13.81□□□□□ -0.2
DNMT3A-202ENST00000321117 IQCGQ9H095 443 aaKnown RBP13.81□□□□□ -0.2
DNMT3A-202ENST00000321117 CXorf56Q9H5V9 222 aa13.81□□□□□ -0.2
DNMT3A-202ENST00000321117 SFI1A8K8P3 1242 aa13.81□□□□□ -0.2
DNMT3A-202ENST00000321117 ZBTB5O15062 677 aa13.81□□□□□ -0.2
DNMT3A-202ENST00000321117 FECHP22830 423 aa13.81□□□□□ -0.2
DNMT3A-202ENST00000321117 ARHGAP27Q6ZUM4 889 aa13.81□□□□□ -0.2
DNMT3A-202ENST00000321117 GLYCTKQ8IVS8 523 aa13.81□□□□□ -0.2
DNMT3A-202ENST00000321117 CCDC13Q8IYE1 715 aa13.81□□□□□ -0.2
DNMT3A-202ENST00000321117 CCDC17Q96LX7 622 aa13.81□□□□□ -0.2
DNMT3A-202ENST00000321117 LARSQ9P2J5 1176 aaKnown RBP13.81□□□□□ -0.2
DNMT3A-202ENST00000321117 PALM3A6NDB9 673 aaPredicted RBP13.8□□□□□ -0.2
DNMT3A-202ENST00000321117 K7ENM7 598 aa13.8□□□□□ -0.2
DNMT3A-202ENST00000321117 SLC9A1P19634 815 aa13.8□□□□□ -0.2
DNMT3A-202ENST00000321117 FRMD5Q7Z6J6 570 aa13.8□□□□□ -0.2
DNMT3A-202ENST00000321117 RPAINQ86UA6 219 aa13.8□□□□□ -0.2
DNMT3A-202ENST00000321117 TNFRSF25Q93038 417 aa13.8□□□□□ -0.2
DNMT3A-202ENST00000321117 SEC16BQ96JE7 1060 aa13.8□□□□□ -0.2
DNMT3A-202ENST00000321117 NPHP3-ACAD11A0A0J9YXS1 232 aa13.8□□□□□ -0.2
DNMT3A-202ENST00000321117 PHF20L1A8MW92 1017 aa13.8□□□□□ -0.2
DNMT3A-202ENST00000321117 PODXLO00592 558 aa13.8□□□□□ -0.2
DNMT3A-202ENST00000321117 FAM153BP0C7A2 387 aa13.8□□□□□ -0.2
DNMT3A-202ENST00000321117 SKOR1P84550 965 aa13.8□□□□□ -0.2
DNMT3A-202ENST00000321117 FAM98CQ17RN3 349 aaKnown RBP13.8□□□□□ -0.2
DNMT3A-202ENST00000321117 FAM153CQ494X1 144 aa13.8□□□□□ -0.2
DNMT3A-202ENST00000321117 AGBL2Q5U5Z8 902 aa13.8□□□□□ -0.2
DNMT3A-202ENST00000321117 HHATQ5VTY9 493 aa13.8□□□□□ -0.2
DNMT3A-202ENST00000321117 PPP1R18Q6NYC8 613 aa13.8□□□□□ -0.2
DNMT3A-202ENST00000321117 RHOT2Q8IXI1 618 aa13.8□□□□□ -0.2
DNMT3A-202ENST00000321117 TEKT1Q969V4 418 aa13.8□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 83 ms