RNA–Protein interactions for RNA: ENST00000307179.8

USP8-201, Transcript of ubiquitin specific peptidase 8, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene USP8, Length 4,243 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP8-201ENST00000307179 COL4A3BPQ9Y5P4 624 aa5.85□□□□□ -1.47
USP8-201ENST00000307179 V9GY48 417 aaPredicted RBP5.85□□□□□ -1.47
USP8-201ENST00000307179 NAV1Q8NEY1 1877 aa5.85□□□□□ -1.47
USP8-201ENST00000307179 FAM205CA6NFA0 338 aa5.85□□□□□ -1.47
USP8-201ENST00000307179 NBPF26B4DH59 902 aa5.85□□□□□ -1.47
USP8-201ENST00000307179 M0R2N6 131 aa5.85□□□□□ -1.47
USP8-201ENST00000307179 KRIT1O00522 736 aa5.85□□□□□ -1.47
USP8-201ENST00000307179 OPLAHO14841 1288 aa5.85□□□□□ -1.47
USP8-201ENST00000307179 ZBTB48P10074 688 aaPredicted RBP5.85□□□□□ -1.47
USP8-201ENST00000307179 PMS2P54278 862 aa5.85□□□□□ -1.47
USP8-201ENST00000307179 CTSWP56202 376 aa5.85□□□□□ -1.47
USP8-201ENST00000307179 TCEAL1Q15170 157 aa5.85□□□□□ -1.47
USP8-201ENST00000307179 EARS2Q5JPH6 523 aaKnown RBP5.85□□□□□ -1.47
USP8-201ENST00000307179 LRRC55Q6ZSA7 311 aa5.85□□□□□ -1.47
USP8-201ENST00000307179 TRMT10CQ7L0Y3 403 aaKnown RBP5.85□□□□□ -1.47
USP8-201ENST00000307179 PNMA8AQ86V59 439 aaPredicted RBP5.85□□□□□ -1.47
USP8-201ENST00000307179 SUPV3L1Q8IYB8 786 aaKnown RBP eCLIP5.85□□□□□ -1.47
USP8-201ENST00000307179 NBPF15Q8N660 670 aa5.85□□□□□ -1.47
USP8-201ENST00000307179 MAGEB6Q8N7X4 407 aa5.85□□□□□ -1.47
USP8-201ENST00000307179 TBC1D16Q8TBP0 767 aa5.85□□□□□ -1.47
USP8-201ENST00000307179 VTI1AQ96AJ9 217 aa5.85□□□□□ -1.47
USP8-201ENST00000307179 KLHL29Q96CT2 875 aa5.85□□□□□ -1.47
USP8-201ENST00000307179 SHISA4Q96DD7 197 aa5.85□□□□□ -1.47
USP8-201ENST00000307179 TUBB6Q9BUF5 446 aa5.85□□□□□ -1.47
USP8-201ENST00000307179 CARD9Q9H257 536 aa5.85□□□□□ -1.47
USP8-201ENST00000307179 LRMDAQ9H2I8 198 aa5.85□□□□□ -1.47
USP8-201ENST00000307179 LARSQ9P2J5 1176 aaKnown RBP5.85□□□□□ -1.47
USP8-201ENST00000307179 TFR2Q9UP52 801 aa5.85□□□□□ -1.47
USP8-201ENST00000307179 BAZ2AQ9UIF9 1905 aaKnown RBP5.85□□□□□ -1.47
USP8-201ENST00000307179 PHF20L1A8MW92 1017 aa5.85□□□□□ -1.47
USP8-201ENST00000307179 KCNK3O14649 394 aa5.85□□□□□ -1.47
USP8-201ENST00000307179 DIAPH2O60879 1101 aa5.85□□□□□ -1.47
USP8-201ENST00000307179 PLEKP08567 350 aaPredicted RBP5.85□□□□□ -1.47
USP8-201ENST00000307179 RPSAP08865 295 aaKnown RBP5.85□□□□□ -1.47
USP8-201ENST00000307179 CXCR5P32302 372 aa5.85□□□□□ -1.47
USP8-201ENST00000307179 ALDH5A1P51649 535 aaPredicted RBP5.85□□□□□ -1.47
USP8-201ENST00000307179 GFPT1Q06210 699 aaPredicted RBP5.85□□□□□ -1.47
USP8-201ENST00000307179 CYFIP1Q7L576 1253 aa5.85□□□□□ -1.47
USP8-201ENST00000307179 SPDYE1Q8NFV5 336 aaPredicted RBP5.85□□□□□ -1.47
USP8-201ENST00000307179 MS4A14Q96JA4 679 aa5.85□□□□□ -1.47
USP8-201ENST00000307179 MXD3Q9BW11 206 aa5.85□□□□□ -1.47
USP8-201ENST00000307179 PAPOLBQ9NRJ5 636 aaKnown RBP5.85□□□□□ -1.47
USP8-201ENST00000307179 CNNM1Q9NRU3 951 aa5.85□□□□□ -1.47
USP8-201ENST00000307179 SYNGAP1Q96PV0 1343 aa5.85□□□□□ -1.47
USP8-201ENST00000307179 ESYT3A0FGR9 886 aa5.85□□□□□ -1.47
USP8-201ENST00000307179 TCEA3O75764 348 aa5.85□□□□□ -1.47
USP8-201ENST00000307179 GNAZP19086 355 aa5.85□□□□□ -1.47
USP8-201ENST00000307179 TMOD1P28289 359 aa5.85□□□□□ -1.47
USP8-201ENST00000307179 SMARCA1P28370 1054 aa5.85□□□□□ -1.47
USP8-201ENST00000307179 CLCN2P51788 898 aa5.85□□□□□ -1.47
USP8-201ENST00000307179 HADHBP55084 474 aaKnown RBP5.85□□□□□ -1.47
USP8-201ENST00000307179 FKBP3Q00688 224 aaKnown RBP5.85□□□□□ -1.47
USP8-201ENST00000307179 RNASELQ05823 741 aaKnown RBP5.85□□□□□ -1.47
USP8-201ENST00000307179 KLHL30Q0D2K2 578 aa5.85□□□□□ -1.47
USP8-201ENST00000307179 GSTA3Q16772 222 aa5.85□□□□□ -1.47
USP8-201ENST00000307179 SPRED3Q2MJR0 410 aa5.85□□□□□ -1.47
USP8-201ENST00000307179 FAM83BQ5T0W9 1011 aa5.85□□□□□ -1.47
USP8-201ENST00000307179 DUPD1Q68J44 220 aa5.85□□□□□ -1.47
USP8-201ENST00000307179 LDHAL6AQ6ZMR3 332 aa5.85□□□□□ -1.47
USP8-201ENST00000307179 SERPINB12Q96P63 405 aa5.85□□□□□ -1.47
USP8-201ENST00000307179 NAP1L4Q99733 375 aaKnown RBP5.85□□□□□ -1.47
USP8-201ENST00000307179 RNPEPL1Q9HAU8 725 aa5.85□□□□□ -1.47
USP8-201ENST00000307179 IL1RAPL1Q9NZN1 696 aa5.85□□□□□ -1.47
USP8-201ENST00000307179 PDP2Q9P2J9 529 aa5.85□□□□□ -1.47
USP8-201ENST00000307179 DENND2AQ9ULE3 1009 aa5.85□□□□□ -1.47
USP8-201ENST00000307179 RBBP6Q7Z6E9 1792 aaKnown RBP5.84□□□□□ -1.47
USP8-201ENST00000307179 PITPNM2Q9BZ72 1349 aa5.84□□□□□ -1.47
USP8-201ENST00000307179 LOXHD1Q8IVV2 1947 aa5.84□□□□□ -1.47
USP8-201ENST00000307179 IGF2BP3O00425 579 aaKnown RBP eCLIP5.84□□□□□ -1.47
USP8-201ENST00000307179 BUB1O43683 1085 aa5.84□□□□□ -1.47
USP8-201ENST00000307179 CEP104O60308 925 aa5.84□□□□□ -1.47
USP8-201ENST00000307179 LINGO3P0C6S8 592 aa5.84□□□□□ -1.47
USP8-201ENST00000307179 PLCG1P19174 1290 aa5.84□□□□□ -1.47
USP8-201ENST00000307179 CHRNA3P32297 505 aa5.84□□□□□ -1.47
USP8-201ENST00000307179 PSMC4P43686 418 aa5.84□□□□□ -1.47
USP8-201ENST00000307179 CTCFP49711 727 aaPredicted RBP5.84□□□□□ -1.47
USP8-201ENST00000307179 KLK7P49862 253 aa5.84□□□□□ -1.47
USP8-201ENST00000307179 POU5F1Q01860 360 aaKnown RBP5.84□□□□□ -1.47
USP8-201ENST00000307179 EHHADHQ08426 723 aa5.84□□□□□ -1.47
USP8-201ENST00000307179 CUL3Q13618 768 aa5.84□□□□□ -1.47
USP8-201ENST00000307179 NKX1-1Q15270 411 aaPredicted RBP5.84□□□□□ -1.47
USP8-201ENST00000307179 TMEM266Q2M3C6 531 aa5.84□□□□□ -1.47
USP8-201ENST00000307179 EDRF1Q3B7T1 1238 aa5.84□□□□□ -1.47
USP8-201ENST00000307179 PPP1R21Q6ZMI0 780 aa5.84□□□□□ -1.47
USP8-201ENST00000307179 TBC1D1Q86TI0 1168 aaPredicted RBP5.84□□□□□ -1.47
USP8-201ENST00000307179 KLHL7Q8IXQ5 586 aa5.84□□□□□ -1.47
USP8-201ENST00000307179 LRRC34Q8IZ02 419 aa5.84□□□□□ -1.47
USP8-201ENST00000307179 RIBC1Q8N443 379 aaPredicted RBP5.84□□□□□ -1.47
USP8-201ENST00000307179 PPP1R14BQ96C90 147 aa5.84□□□□□ -1.47
USP8-201ENST00000307179 THOC1Q96FV9 657 aaKnown RBP5.84□□□□□ -1.47
USP8-201ENST00000307179 HES6Q96HZ4 224 aa5.84□□□□□ -1.47
USP8-201ENST00000307179 SEMA6BQ9H3T3 888 aa5.84□□□□□ -1.47
USP8-201ENST00000307179 ARMT1Q9H993 441 aa5.84□□□□□ -1.47
USP8-201ENST00000307179 NLRC4Q9NPP4 1024 aa5.84□□□□□ -1.47
USP8-201ENST00000307179 FAM207AQ9NSI2 230 aaPredicted RBP5.84□□□□□ -1.47
USP8-201ENST00000307179 SALL4Q9UJQ4 1053 aa5.84□□□□□ -1.47
USP8-201ENST00000307179 DDX52Q9Y2R4 599 aaKnown RBP eCLIP5.84□□□□□ -1.47
USP8-201ENST00000307179 NHSQ6T4R5 1651 aa5.84□□□□□ -1.47
USP8-201ENST00000307179 MIF4GDA9UHW6 222 aaKnown RBP5.84□□□□□ -1.47
USP8-201ENST00000307179 UBE2Q2LH0YL09 131 aa5.84□□□□□ -1.47
Retrieved 100 of 20,778 RNA–protein pairs in 22.5 ms