RNA–Protein interactions for RNA: ENST00000306256.13

RER1-201, Transcript of retention in endoplasmic reticulum sorting receptor 1, humanhuman

TSL 5

Gene RER1, Length 695 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RER1-201ENST00000306256 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP23.34■■□□□ 1.33
RER1-201ENST00000306256 BACH1O14867 736 aa23.34■■□□□ 1.33
RER1-201ENST00000306256 ATG7O95352 703 aa23.34■■□□□ 1.33
RER1-201ENST00000306256 TIGD5Q53EQ6 642 aa23.34■■□□□ 1.33
RER1-201ENST00000306256 IER5Q5VY09 327 aa23.34■■□□□ 1.33
RER1-201ENST00000306256 BLOC1S2Q6QNY1 142 aa23.34■■□□□ 1.33
RER1-201ENST00000306256 NIPA1Q7RTP0 329 aa23.34■■□□□ 1.33
RER1-201ENST00000306256 IGLV3-22A0A075B6J6 115 aa23.33■■□□□ 1.33
RER1-201ENST00000306256 CCDC196A0A1B0GTZ2 297 aa23.33■■□□□ 1.33
RER1-201ENST00000306256 M0QZ92 97 aa23.33■■□□□ 1.33
RER1-201ENST00000306256 LINC00271P0C7V0 271 aa23.33■■□□□ 1.33
RER1-201ENST00000306256 PKN1Q16512 942 aa23.33■■□□□ 1.33
RER1-201ENST00000306256 TCEAL5Q5H9L2 206 aa23.33■■□□□ 1.33
RER1-201ENST00000306256 ABHD15Q6UXT9 468 aa23.33■■□□□ 1.33
RER1-201ENST00000306256 CCDC60Q8IWA6 550 aaPredicted RBP23.33■■□□□ 1.33
RER1-201ENST00000306256 BANK1Q8NDB2 785 aa23.33■■□□□ 1.33
RER1-201ENST00000306256 CRYGNQ8WXF5 182 aa23.33■■□□□ 1.33
RER1-201ENST00000306256 PHKBQ93100 1093 aa23.33■■□□□ 1.33
RER1-201ENST00000306256 NID2Q14112 1375 aa23.32■■□□□ 1.32
RER1-201ENST00000306256 IGKV6D-21A0A0A0MT36 114 aa23.32■■□□□ 1.32
RER1-201ENST00000306256 ESYT2A0FGR8 921 aa23.32■■□□□ 1.32
RER1-201ENST00000306256 DHX15O43143 795 aaKnown RBP23.32■■□□□ 1.32
RER1-201ENST00000306256 RPLP2P05387 115 aaKnown RBP23.32■■□□□ 1.32
RER1-201ENST00000306256 MTHFD1LQ6UB35 978 aa23.32■■□□□ 1.32
RER1-201ENST00000306256 RTN4RL1Q86UN2 441 aaPredicted RBP23.32■■□□□ 1.32
RER1-201ENST00000306256 REXO1Q8N1G1 1221 aaKnown RBP23.32■■□□□ 1.32
RER1-201ENST00000306256 RASGRP4Q8TDF6 673 aa23.32■■□□□ 1.32
RER1-201ENST00000306256 TNPO1Q92973 898 aaKnown RBP23.32■■□□□ 1.32
RER1-201ENST00000306256 ZMYND12Q9H0C1 365 aa23.32■■□□□ 1.32
RER1-201ENST00000306256 IGSF9BQ9UPX0 1349 aa23.32■■□□□ 1.32
RER1-201ENST00000306256 FNDC1Q4ZHG4 1894 aaPredicted RBP23.31■■□□□ 1.32
RER1-201ENST00000306256 IPO5O00410 1097 aaKnown RBP23.31■■□□□ 1.32
RER1-201ENST00000306256 CYP3A4P08684 503 aa23.31■■□□□ 1.32
RER1-201ENST00000306256 RPS6KB1P23443 525 aa23.31■■□□□ 1.32
RER1-201ENST00000306256 KLRC1P26715 233 aa23.31■■□□□ 1.32
RER1-201ENST00000306256 PAK2Q13177 524 aa23.31■■□□□ 1.32
RER1-201ENST00000306256 BTG3Q14201 252 aaPredicted RBP23.31■■□□□ 1.32
RER1-201ENST00000306256 LEXMQ3ZCV2 418 aa23.31■■□□□ 1.32
RER1-201ENST00000306256 FAM160B1Q5W0V3 765 aa23.31■■□□□ 1.32
RER1-201ENST00000306256 GADD45GIP1Q8TAE8 222 aaPredicted RBP23.31■■□□□ 1.32
RER1-201ENST00000306256 ATP8B4Q8TF62 1192 aa23.31■■□□□ 1.32
RER1-201ENST00000306256 CELF4Q9BZC1 486 aaKnown RBP23.31■■□□□ 1.32
RER1-201ENST00000306256 EPHX3Q9H6B9 360 aa23.31■■□□□ 1.32
RER1-201ENST00000306256 C6orf50Q9HD87 102 aa23.31■■□□□ 1.32
RER1-201ENST00000306256 PADI3Q9ULW8 664 aa23.31■■□□□ 1.32
RER1-201ENST00000306256 SMIM35A0A1B0GVV1 85 aa23.3■■□□□ 1.32
RER1-201ENST00000306256 C5orf67F2Z3F1 127 aa23.3■■□□□ 1.32
RER1-201ENST00000306256 GRM6O15303 877 aa23.3■■□□□ 1.32
RER1-201ENST00000306256 PRPF3O43395 683 aaKnown RBP23.3■■□□□ 1.32
RER1-201ENST00000306256 HBP1O60381 514 aa23.3■■□□□ 1.32
RER1-201ENST00000306256 DGKIO75912 1065 aa23.3■■□□□ 1.32
RER1-201ENST00000306256 CSPG5O95196 566 aa23.3■■□□□ 1.32
RER1-201ENST00000306256 BMPR1AP36894 532 aa23.3■■□□□ 1.32
RER1-201ENST00000306256 SLC26A2P50443 739 aa23.3■■□□□ 1.32
RER1-201ENST00000306256 TMEM266Q2M3C6 531 aa23.3■■□□□ 1.32
RER1-201ENST00000306256 PDXDC2PQ6P474 469 aa23.3■■□□□ 1.32
RER1-201ENST00000306256 EP400NLQ6ZTU2 488 aa23.3■■□□□ 1.32
RER1-201ENST00000306256 ZNF689Q96CS4 500 aaPredicted RBP23.3■■□□□ 1.32
RER1-201ENST00000306256 CCDC136Q96JN2 1154 aa23.3■■□□□ 1.32
RER1-201ENST00000306256 NSUN3Q9H649 340 aaKnown RBP23.3■■□□□ 1.32
RER1-201ENST00000306256 CD320Q9NPF0 282 aa23.3■■□□□ 1.32
RER1-201ENST00000306256 ZNF302Q9NR11 478 aa23.3■■□□□ 1.32
RER1-201ENST00000306256 GINS2Q9Y248 185 aa23.3■■□□□ 1.32
RER1-201ENST00000306256 SQORQ9Y6N5 450 aa23.3■■□□□ 1.32
RER1-201ENST00000306256 H3BQ06 376 aaPredicted RBP23.29■■□□□ 1.32
RER1-201ENST00000306256 IL9P15248 144 aa23.29■■□□□ 1.32
RER1-201ENST00000306256 IBSPP21815 317 aaPredicted RBP23.29■■□□□ 1.32
RER1-201ENST00000306256 KRT76Q01546 638 aa23.29■■□□□ 1.32
RER1-201ENST00000306256 SWSAP1Q6NVH7 229 aa23.29■■□□□ 1.32
RER1-201ENST00000306256 MIS18BP1Q6P0N0 1132 aa23.29■■□□□ 1.32
RER1-201ENST00000306256 CCDC12Q8WUD4 166 aaPredicted RBP23.29■■□□□ 1.32
RER1-201ENST00000306256 KHSRPQ92945 711 aaKnown RBP eCLIP23.29■■□□□ 1.322e-7■□□□□ 9.6
RER1-201ENST00000306256 CLP1Q92989 425 aaKnown RBP23.29■■□□□ 1.32
RER1-201ENST00000306256 ZNF577Q9BSK1 485 aa23.29■■□□□ 1.32
RER1-201ENST00000306256 C11orf84Q9BUA3 381 aaPredicted RBP23.29■■□□□ 1.32
RER1-201ENST00000306256 FTHL17Q9BXU8 183 aa23.29■■□□□ 1.32
RER1-201ENST00000306256 TMX1Q9H3N1 280 aa23.29■■□□□ 1.32
RER1-201ENST00000306256 KDM3AQ9Y4C1 1321 aa23.29■■□□□ 1.32
RER1-201ENST00000306256 RB1P06400 928 aa23.28■■□□□ 1.32
RER1-201ENST00000306256 ATP4AP20648 1035 aa23.28■■□□□ 1.32
RER1-201ENST00000306256 CCT2P78371 535 aaKnown RBP23.28■■□□□ 1.32
RER1-201ENST00000306256 AKAP17AQ02040 695 aaKnown RBP23.28■■□□□ 1.32
RER1-201ENST00000306256 NTRK3Q16288 839 aa23.28■■□□□ 1.32
RER1-201ENST00000306256 PRR16Q569H4 304 aa23.28■■□□□ 1.32
RER1-201ENST00000306256 PTCRAQ6ISU1 281 aaPredicted RBP23.28■■□□□ 1.32
RER1-201ENST00000306256 TRMT1LQ7Z2T5 733 aaKnown RBP23.28■■□□□ 1.32
RER1-201ENST00000306256 PPP1R16BQ96T49 567 aa23.28■■□□□ 1.32
RER1-201ENST00000306256 SLC26A6Q9BXS9 759 aa23.28■■□□□ 1.32
RER1-201ENST00000306256 AGXT2Q9BYV1 514 aa23.28■■□□□ 1.32
RER1-201ENST00000306256 CDHR5Q9HBB8 845 aa23.28■■□□□ 1.32
RER1-201ENST00000306256 NCOA5Q9HCD5 579 aaKnown RBP23.28■■□□□ 1.32
RER1-201ENST00000306256 RWDD3Q9Y3V2 267 aa23.28■■□□□ 1.32
RER1-201ENST00000306256 MRPL42Q9Y6G3 142 aaKnown RBP23.28■■□□□ 1.32
RER1-201ENST00000306256 PLXNA4Q9HCM2 1894 aa23.28■■□□□ 1.32
RER1-201ENST00000306256 COL1A2P08123 1366 aa23.27■■□□□ 1.32
RER1-201ENST00000306256 ZBTB42B2RXF5 422 aa23.27■■□□□ 1.32
RER1-201ENST00000306256 GNA11P29992 359 aa23.27■■□□□ 1.32
RER1-201ENST00000306256 GATMP50440 423 aa23.27■■□□□ 1.32
RER1-201ENST00000306256 SETQ01105 290 aaPredicted RBP23.27■■□□□ 1.32
RER1-201ENST00000306256 PAN2Q504Q3 1202 aaKnown RBP23.27■■□□□ 1.32
Retrieved 100 of 20,778 RNA–protein pairs in 16.8 ms