RNA–Protein interactions for RNA: ENST00000289292.11

SHROOM4-201, Transcript of shroom family member 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SHROOM4, Length 6,261 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHROOM4-201ENST00000289292 SEC23IPQ9Y6Y8 1000 aaKnown RBP16.51■□□□□ 0.23
SHROOM4-201ENST00000289292 SETD1BQ9UPS6 1966 aaKnown RBP16.51■□□□□ 0.23
SHROOM4-201ENST00000289292 CDC37Q16543 378 aaPredicted RBP16.51■□□□□ 0.23
SHROOM4-201ENST00000289292 SUSD4Q5VX71 490 aa16.51■□□□□ 0.23
SHROOM4-201ENST00000289292 UNC13DQ70J99 1090 aa16.51■□□□□ 0.23
SHROOM4-201ENST00000289292 ZNF579Q8NAF0 562 aaKnown RBP16.51■□□□□ 0.23
SHROOM4-201ENST00000289292 SMYD3Q9H7B4 428 aa16.51■□□□□ 0.23
SHROOM4-201ENST00000289292 LMTK3Q96Q04 1460 aa16.51■□□□□ 0.23
SHROOM4-201ENST00000289292 EFCAB6Q5THR3 1501 aa16.51■□□□□ 0.23
SHROOM4-201ENST00000289292 IQCB1Q15051 598 aa16.51■□□□□ 0.23
SHROOM4-201ENST00000289292 GLE1Q53GS7 698 aaKnown RBP16.51■□□□□ 0.23
SHROOM4-201ENST00000289292 SRRM1Q8IYB3 904 aaKnown RBP16.51■□□□□ 0.23
SHROOM4-201ENST00000289292 SAAL1Q96ER3 474 aa16.51■□□□□ 0.23
SHROOM4-201ENST00000289292 TTC7AQ9ULT0 858 aaPredicted RBP16.51■□□□□ 0.23
SHROOM4-201ENST00000289292 ALDH1B1P30837 517 aa16.5■□□□□ 0.23
SHROOM4-201ENST00000289292 SMAD1Q15797 465 aaKnown RBP16.5■□□□□ 0.23
SHROOM4-201ENST00000289292 MCF2L2Q86YR7 1114 aa16.5■□□□□ 0.23
SHROOM4-201ENST00000289292 TTLL11Q8NHH1 800 aa16.5■□□□□ 0.23
SHROOM4-201ENST00000289292 INPP5FQ9Y2H2 1132 aa16.5■□□□□ 0.23
SHROOM4-201ENST00000289292 F5H423 210 aaPredicted RBP16.5■□□□□ 0.23
SHROOM4-201ENST00000289292 CYP2C19P33261 490 aa16.5■□□□□ 0.23
SHROOM4-201ENST00000289292 MXI1P50539 228 aa16.5■□□□□ 0.23
SHROOM4-201ENST00000289292 RNASELQ05823 741 aaKnown RBP16.5■□□□□ 0.23
SHROOM4-201ENST00000289292 COASYQ13057 564 aa16.5■□□□□ 0.23
SHROOM4-201ENST00000289292 CDO1Q16878 200 aa16.5■□□□□ 0.23
SHROOM4-201ENST00000289292 SFR1Q86XK3 245 aa16.5■□□□□ 0.23
SHROOM4-201ENST00000289292 PYROXD1Q8WU10 500 aa16.5■□□□□ 0.23
SHROOM4-201ENST00000289292 HAUS2Q9NVX0 235 aa16.5■□□□□ 0.23
SHROOM4-201ENST00000289292 RASA4BC9J798 803 aa16.5■□□□□ 0.23
SHROOM4-201ENST00000289292 H7C1W4 665 aa16.5■□□□□ 0.23
SHROOM4-201ENST00000289292 RASA4O43374 803 aa16.5■□□□□ 0.23
SHROOM4-201ENST00000289292 SPAG7O75391 227 aa16.5■□□□□ 0.23
SHROOM4-201ENST00000289292 FOSP01100 380 aaPredicted RBP16.5■□□□□ 0.23
SHROOM4-201ENST00000289292 KRT3P12035 628 aa16.5■□□□□ 0.23
SHROOM4-201ENST00000289292 RWDD2BP57060 319 aa16.5■□□□□ 0.23
SHROOM4-201ENST00000289292 BPIFB4P59827 614 aa16.5■□□□□ 0.23
SHROOM4-201ENST00000289292 TXNRD1Q16881 649 aa16.5■□□□□ 0.23
SHROOM4-201ENST00000289292 BRDTQ58F21 947 aaPredicted RBP16.5■□□□□ 0.23
SHROOM4-201ENST00000289292 HSP90AA5PQ58FG0 334 aa16.5■□□□□ 0.23
SHROOM4-201ENST00000289292 GPATCH4Q5T3I0 446 aaKnown RBP16.5■□□□□ 0.23
SHROOM4-201ENST00000289292 ENAHQ8N8S7 591 aaPredicted RBP16.5■□□□□ 0.23
SHROOM4-201ENST00000289292 NCAPG2Q86XI2 1143 aa16.5■□□□□ 0.23
SHROOM4-201ENST00000289292 ANGPTL2Q9UKU9 493 aa16.5■□□□□ 0.23
SHROOM4-201ENST00000289292 GPC4O75487 556 aa16.5■□□□□ 0.23
SHROOM4-201ENST00000289292 TFAMQ00059 246 aaKnown RBP16.5■□□□□ 0.23
SHROOM4-201ENST00000289292 ZNF746Q6NUN9 644 aaPredicted RBP16.5■□□□□ 0.23
SHROOM4-201ENST00000289292 RAD54LQ92698 747 aa16.5■□□□□ 0.23
SHROOM4-201ENST00000289292 TRIM11Q96F44 468 aa16.5■□□□□ 0.23
SHROOM4-201ENST00000289292 CEP170P1Q96L14 293 aa16.5■□□□□ 0.23
SHROOM4-201ENST00000289292 DBNDD1Q9H9R9 158 aa16.5■□□□□ 0.23
SHROOM4-201ENST00000289292 IVNS1ABPQ9Y6Y0 642 aa16.5■□□□□ 0.23
SHROOM4-201ENST00000289292 XDHP47989 1333 aa16.5■□□□□ 0.23
SHROOM4-201ENST00000289292 PFKFB3Q16875 520 aaPredicted RBP16.49■□□□□ 0.23
SHROOM4-201ENST00000289292 EPM2AIP1Q7L775 607 aaPredicted RBP16.49■□□□□ 0.23
SHROOM4-201ENST00000289292 ZNF710Q8N1W2 664 aa16.49■□□□□ 0.23
SHROOM4-201ENST00000289292 NACC1Q96RE7 527 aa16.49■□□□□ 0.23
SHROOM4-201ENST00000289292 TRIM56Q9BRZ2 755 aaKnown RBP16.49■□□□□ 0.23
SHROOM4-201ENST00000289292 IL25Q9H293 177 aa16.49■□□□□ 0.23
SHROOM4-201ENST00000289292 ANKRD20A4Q4UJ75 823 aa16.49■□□□□ 0.23
SHROOM4-201ENST00000289292 ANKRD20A8PQ5CZ79 823 aa16.49■□□□□ 0.23
SHROOM4-201ENST00000289292 ANKRD20A2Q5SQ80 823 aa16.49■□□□□ 0.23
SHROOM4-201ENST00000289292 ANKRD20A1Q5TYW2 823 aa16.49■□□□□ 0.23
SHROOM4-201ENST00000289292 SYDE2Q5VT97 1194 aa16.49■□□□□ 0.23
SHROOM4-201ENST00000289292 ATP6V1G3Q96LB4 118 aa16.49■□□□□ 0.23
SHROOM4-201ENST00000289292 CSRNP1Q96S65 589 aa16.49■□□□□ 0.23
SHROOM4-201ENST00000289292 DCTN4Q9UJW0 460 aa16.49■□□□□ 0.23
SHROOM4-201ENST00000289292 ZBTB12Q9Y330 459 aaPredicted RBP16.49■□□□□ 0.23
SHROOM4-201ENST00000289292 NOC2LQ9Y3T9 749 aaKnown RBP16.49■□□□□ 0.23
SHROOM4-201ENST00000289292 hCG_2014768A0A024R1R8 64 aa16.49■□□□□ 0.23
SHROOM4-201ENST00000289292 FAM205CA6NFA0 338 aa16.49■□□□□ 0.23
SHROOM4-201ENST00000289292 SLC4A1P02730 911 aa16.49■□□□□ 0.23
SHROOM4-201ENST00000289292 STAT3P40763 770 aa16.49■□□□□ 0.23
SHROOM4-201ENST00000289292 ERFP50548 548 aa16.49■□□□□ 0.23
SHROOM4-201ENST00000289292 GRAMD1BQ3KR37 738 aa16.49■□□□□ 0.23
SHROOM4-201ENST00000289292 NIM1KQ8IY84 436 aa16.49■□□□□ 0.23
SHROOM4-201ENST00000289292 LBHD1Q9BQE6 289 aaPredicted RBP16.49■□□□□ 0.23
SHROOM4-201ENST00000289292 FBXL5Q9UKA1 691 aa16.49■□□□□ 0.23
SHROOM4-201ENST00000289292 TFR2Q9UP52 801 aa16.49■□□□□ 0.23
SHROOM4-201ENST00000289292 BCS1LQ9Y276 419 aa16.49■□□□□ 0.23
SHROOM4-201ENST00000289292 CDC42BPBQ9Y5S2 1711 aa16.49■□□□□ 0.23
SHROOM4-201ENST00000289292 STK36Q9NRP7 1315 aa16.49■□□□□ 0.23
SHROOM4-201ENST00000289292 GCFC2P16383 781 aaKnown RBP16.49■□□□□ 0.23
SHROOM4-201ENST00000289292 FGFR4P22455 802 aa16.49■□□□□ 0.23
SHROOM4-201ENST00000289292 PHEXP78562 749 aa16.49■□□□□ 0.23
SHROOM4-201ENST00000289292 CEP70Q8NHQ1 597 aa16.49■□□□□ 0.23
SHROOM4-201ENST00000289292 ANAPC7Q9UJX3 599 aa16.49■□□□□ 0.23
SHROOM4-201ENST00000289292 KCNH2Q12809 1159 aa16.48■□□□□ 0.23
SHROOM4-201ENST00000289292 MTERF2Q49AM1 385 aa16.48■□□□□ 0.23
SHROOM4-201ENST00000289292 ZFP69BQ9UJL9 534 aa16.48■□□□□ 0.23
SHROOM4-201ENST00000289292 PPEF1O14829 653 aaPredicted RBP16.48■□□□□ 0.23
SHROOM4-201ENST00000289292 APOEP02649 317 aa16.48■□□□□ 0.23
SHROOM4-201ENST00000289292 BIRC2Q13490 618 aa16.48■□□□□ 0.23
SHROOM4-201ENST00000289292 SLC44A5Q8NCS7 719 aa16.48■□□□□ 0.23
SHROOM4-201ENST00000289292 ANKRD36BP1Q96IX9 119 aa16.48■□□□□ 0.23
SHROOM4-201ENST00000289292 MED14O60244 1454 aa16.48■□□□□ 0.23
SHROOM4-201ENST00000289292 GADL1Q6ZQY3 521 aa16.48■□□□□ 0.23
SHROOM4-201ENST00000289292 C4orf50Q6ZRC1 276 aa16.48■□□□□ 0.23
SHROOM4-201ENST00000289292 PRMT1Q99873 361 aaKnown RBP16.48■□□□□ 0.23
SHROOM4-201ENST00000289292 TMEM206Q9H813 350 aa16.48■□□□□ 0.23
SHROOM4-201ENST00000289292 THEGQ9P2T0 379 aa16.48■□□□□ 0.23
Retrieved 100 of 20,778 RNA–protein pairs in 29.7 ms