RNA–Protein interactions for RNA: ENST00000288197.9

CACNA2D3-201, Transcript of calcium voltage-gated channel auxiliary subunit alpha2delta 3, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CACNA2D3, Length 3,671 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA2D3-201ENST00000288197 PRPHP41219 470 aa17.49■□□□□ 0.39
CACNA2D3-201ENST00000288197 DR1Q01658 176 aa17.49■□□□□ 0.39
CACNA2D3-201ENST00000288197 SLC20A2Q08357 652 aa17.49■□□□□ 0.39
CACNA2D3-201ENST00000288197 SYCE1Q8N0S2 351 aa17.49■□□□□ 0.39
CACNA2D3-201ENST00000288197 METTL13Q8N6R0 699 aa17.49■□□□□ 0.39
CACNA2D3-201ENST00000288197 BLOC1S4Q9NUP1 217 aa17.49■□□□□ 0.39
CACNA2D3-201ENST00000288197 USTQ9Y2C2 406 aa17.49■□□□□ 0.39
CACNA2D3-201ENST00000288197 UCHL3P15374 230 aa17.49■□□□□ 0.39
CACNA2D3-201ENST00000288197 PLCB3Q01970 1234 aa17.49■□□□□ 0.39
CACNA2D3-201ENST00000288197 TRAPPC3LQ5T215 181 aa17.49■□□□□ 0.39
CACNA2D3-201ENST00000288197 PPM1KQ8N3J5 372 aa17.49■□□□□ 0.39
CACNA2D3-201ENST00000288197 CCDC197Q8NCU1 140 aa17.49■□□□□ 0.39
CACNA2D3-201ENST00000288197 RAB17Q9H0T7 212 aa17.49■□□□□ 0.39
CACNA2D3-201ENST00000288197 RNF14Q9UBS8 474 aa17.49■□□□□ 0.39
CACNA2D3-201ENST00000288197 MYBP10242 640 aa17.48■□□□□ 0.39
CACNA2D3-201ENST00000288197 ERVK-9P63128 1117 aa17.48■□□□□ 0.39
CACNA2D3-201ENST00000288197 PPP2R2AP63151 447 aa17.48■□□□□ 0.39
CACNA2D3-201ENST00000288197 CDC37Q16543 378 aaPredicted RBP17.48■□□□□ 0.39
CACNA2D3-201ENST00000288197 CCDC63Q8NA47 563 aa17.48■□□□□ 0.39
CACNA2D3-201ENST00000288197 PNMA5Q96PV4 448 aa17.48■□□□□ 0.39
CACNA2D3-201ENST00000288197 NSRP1Q9H0G5 558 aaKnown RBP17.48■□□□□ 0.39
CACNA2D3-201ENST00000288197 SIK3Q9Y2K2 1263 aa17.48■□□□□ 0.39
CACNA2D3-201ENST00000288197 RSPH10B2B2RC85 870 aa17.48■□□□□ 0.39
CACNA2D3-201ENST00000288197 RSPH10BP0C881 870 aa17.48■□□□□ 0.39
CACNA2D3-201ENST00000288197 FGFR4P22455 802 aa17.48■□□□□ 0.39
CACNA2D3-201ENST00000288197 CASP4P49662 377 aa17.48■□□□□ 0.39
CACNA2D3-201ENST00000288197 NAB2Q15742 525 aa17.48■□□□□ 0.39
CACNA2D3-201ENST00000288197 FAM178BQ8IXR5 827 aa17.48■□□□□ 0.39
CACNA2D3-201ENST00000288197 MICAL1Q8TDZ2 1067 aa17.48■□□□□ 0.39
CACNA2D3-201ENST00000288197 NCAPGQ9BPX3 1015 aa17.48■□□□□ 0.39
CACNA2D3-201ENST00000288197 AZI2Q9H6S1 392 aa17.48■□□□□ 0.39
CACNA2D3-201ENST00000288197 OSGEPQ9NPF4 335 aa17.48■□□□□ 0.39
CACNA2D3-201ENST00000288197 SWAP70Q9UH65 585 aa17.48■□□□□ 0.39
CACNA2D3-201ENST00000288197 MED1Q15648 1581 aaPredicted RBP17.48■□□□□ 0.39
CACNA2D3-201ENST00000288197 KDM3BQ7LBC6 1761 aa17.48■□□□□ 0.39
CACNA2D3-201ENST00000288197 GRID2IPA4D2P6 1211 aa17.48■□□□□ 0.39
CACNA2D3-201ENST00000288197 TRIM68Q6AZZ1 485 aa17.48■□□□□ 0.39
CACNA2D3-201ENST00000288197 CCDC13Q8IYE1 715 aa17.48■□□□□ 0.39
CACNA2D3-201ENST00000288197 SLC24A3Q9HC58 644 aa17.48■□□□□ 0.39
CACNA2D3-201ENST00000288197 SORBS3O60504 671 aa17.47■□□□□ 0.39
CACNA2D3-201ENST00000288197 ODR4Q5SWX8 454 aa17.47■□□□□ 0.39
CACNA2D3-201ENST00000288197 HVCN1Q96D96 273 aa17.47■□□□□ 0.39
CACNA2D3-201ENST00000288197 SERPINB13Q9UIV8 391 aa17.47■□□□□ 0.39
CACNA2D3-201ENST00000288197 CEP83Q9Y592 693 aa17.47■□□□□ 0.39
CACNA2D3-201ENST00000288197 KDM3AQ9Y4C1 1321 aa17.47■□□□□ 0.39
CACNA2D3-201ENST00000288197 MRC1P22897 1456 aa17.47■□□□□ 0.39
CACNA2D3-201ENST00000288197 A0A1W2PQJ5 194 aa17.47■□□□□ 0.39
CACNA2D3-201ENST00000288197 NMT1P30419 496 aaKnown RBP17.47■□□□□ 0.39
CACNA2D3-201ENST00000288197 IKZF4Q9H2S9 585 aa17.47■□□□□ 0.39
CACNA2D3-201ENST00000288197 RABGAP1Q9Y3P9 1069 aa17.47■□□□□ 0.39
CACNA2D3-201ENST00000288197 SSU72P8A0A1W2PR75 194 aa17.46■□□□□ 0.39
CACNA2D3-201ENST00000288197 PALM3A6NDB9 673 aaPredicted RBP17.46■□□□□ 0.39
CACNA2D3-201ENST00000288197 RASSF10A6NK89 507 aa17.46■□□□□ 0.39
CACNA2D3-201ENST00000288197 PDHBP11177 359 aa17.46■□□□□ 0.39
CACNA2D3-201ENST00000288197 HP1BP3Q5SSJ5 553 aaPredicted RBP17.46■□□□□ 0.39
CACNA2D3-201ENST00000288197 SLFN13Q68D06 897 aa17.46■□□□□ 0.39
CACNA2D3-201ENST00000288197 HOOK2Q96ED9 719 aa17.46■□□□□ 0.39
CACNA2D3-201ENST00000288197 BUD13Q9BRD0 619 aaKnown RBP eCLIP17.46■□□□□ 0.39
CACNA2D3-201ENST00000288197 MMTAG2Q9BU76 263 aaKnown RBP17.46■□□□□ 0.39
CACNA2D3-201ENST00000288197 MST1RQ04912 1400 aa17.46■□□□□ 0.39
CACNA2D3-201ENST00000288197 TTLL1O95922 423 aa17.46■□□□□ 0.39
CACNA2D3-201ENST00000288197 KCNJ1P48048 391 aa17.46■□□□□ 0.39
CACNA2D3-201ENST00000288197 GALCP54803 685 aa17.46■□□□□ 0.39
CACNA2D3-201ENST00000288197 ZC2HC1CQ53FD0 456 aaPredicted RBP17.46■□□□□ 0.39
CACNA2D3-201ENST00000288197 ZNF571Q7Z3V5 609 aaPredicted RBP17.46■□□□□ 0.39
CACNA2D3-201ENST00000288197 UBL4BQ8N7F7 174 aa17.46■□□□□ 0.39
CACNA2D3-201ENST00000288197 PSMD1Q99460 953 aa17.46■□□□□ 0.39
CACNA2D3-201ENST00000288197 ANO3Q9BYT9 981 aa17.46■□□□□ 0.39
CACNA2D3-201ENST00000288197 HOMER2Q9NSB8 354 aa17.46■□□□□ 0.39
CACNA2D3-201ENST00000288197 DBR1Q9UK59 544 aaKnown RBP17.46■□□□□ 0.39
CACNA2D3-201ENST00000288197 DNAJC12Q9UKB3 198 aa17.46■□□□□ 0.39
CACNA2D3-201ENST00000288197 MTUS1Q9ULD2 1270 aa17.46■□□□□ 0.39
CACNA2D3-201ENST00000288197 CHD2O14647 1828 aaKnown RBP17.46■□□□□ 0.39
CACNA2D3-201ENST00000288197 CHUKO15111 745 aa17.46■□□□□ 0.39
CACNA2D3-201ENST00000288197 NR3C1P04150 777 aa17.46■□□□□ 0.39
CACNA2D3-201ENST00000288197 PBKQ96KB5 322 aa17.46■□□□□ 0.39
CACNA2D3-201ENST00000288197 CXorf56Q9H5V9 222 aa17.46■□□□□ 0.39
CACNA2D3-201ENST00000288197 CCDC169A6NNP5 214 aa17.45■□□□□ 0.38
CACNA2D3-201ENST00000288197 KCNMA1Q12791 1236 aa17.45■□□□□ 0.38
CACNA2D3-201ENST00000288197 NEDD1Q8NHV4 660 aa17.45■□□□□ 0.38
CACNA2D3-201ENST00000288197 ELMO3Q96BJ8 720 aa17.45■□□□□ 0.38
CACNA2D3-201ENST00000288197 SLC40A1Q9NP59 571 aa17.45■□□□□ 0.38
CACNA2D3-201ENST00000288197 GOLGA8IPA6NC78 632 aa17.45■□□□□ 0.38
CACNA2D3-201ENST00000288197 GOLGA8JA6NMD2 632 aa17.45■□□□□ 0.38
CACNA2D3-201ENST00000288197 ATMINO43313 823 aaPredicted RBP17.45■□□□□ 0.38
CACNA2D3-201ENST00000288197 PSMD2Q13200 908 aa17.45■□□□□ 0.38
CACNA2D3-201ENST00000288197 SBK1Q52WX2 424 aa17.45■□□□□ 0.38
CACNA2D3-201ENST00000288197 NEK9Q8TD19 979 aa17.45■□□□□ 0.38
CACNA2D3-201ENST00000288197 RSRC1Q96IZ7 334 aaKnown RBP17.45■□□□□ 0.38
CACNA2D3-201ENST00000288197 SEC16BQ96JE7 1060 aa17.45■□□□□ 0.38
CACNA2D3-201ENST00000288197 CD209Q9NNX6 404 aa17.45■□□□□ 0.38
CACNA2D3-201ENST00000288197 UBE2TQ9NPD8 197 aaPredicted RBP17.45■□□□□ 0.38
CACNA2D3-201ENST00000288197 PNMA6FA0A0J9YX94 578 aa17.45■□□□□ 0.38
CACNA2D3-201ENST00000288197 ARHGEF35A5YM69 484 aa17.45■□□□□ 0.38
CACNA2D3-201ENST00000288197 DRAP1Q14919 205 aaPredicted RBP17.45■□□□□ 0.38
CACNA2D3-201ENST00000288197 CYP4F22Q6NT55 531 aa17.45■□□□□ 0.38
CACNA2D3-201ENST00000288197 NAP1L3Q99457 506 aaPredicted RBP17.45■□□□□ 0.38
CACNA2D3-201ENST00000288197 VEZTQ9HBM0 779 aa17.45■□□□□ 0.38
CACNA2D3-201ENST00000288197 PSMC6P62333 389 aa17.44■□□□□ 0.38
CACNA2D3-201ENST00000288197 CUL1Q13616 776 aa17.44■□□□□ 0.38
Retrieved 100 of 20,778 RNA–protein pairs in 13.4 ms