RNA–Protein interactions for RNA: ENST00000265081.6

MSH3-201, Transcript of mutS homolog 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene MSH3, Length 4,092 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH3-201ENST00000265081 HOXA13P31271 388 aaPredicted RBP12.28□□□□□ -0.44
MSH3-201ENST00000265081 KCNH2Q12809 1159 aa12.28□□□□□ -0.44
MSH3-201ENST00000265081 SPA17Q15506 151 aa12.28□□□□□ -0.44
MSH3-201ENST00000265081 KLHDC7AQ5VTJ3 777 aa12.28□□□□□ -0.44
MSH3-201ENST00000265081 SLC35C1Q96A29 364 aa12.28□□□□□ -0.44
MSH3-201ENST00000265081 ARID3AQ99856 593 aa12.28□□□□□ -0.44
MSH3-201ENST00000265081 METTL14Q9HCE5 456 aaKnown RBP12.28□□□□□ -0.44
MSH3-201ENST00000265081 STK32BQ9NY57 414 aa12.28□□□□□ -0.44
MSH3-201ENST00000265081 PSD3Q9NYI0 1048 aa12.28□□□□□ -0.44
MSH3-201ENST00000265081 HDAC9Q9UKV0 1011 aa12.28□□□□□ -0.44
MSH3-201ENST00000265081 CETN3O15182 167 aa12.28□□□□□ -0.44
MSH3-201ENST00000265081 DHX15O43143 795 aaKnown RBP12.28□□□□□ -0.44
MSH3-201ENST00000265081 USO1O60763 962 aaKnown RBP12.28□□□□□ -0.44
MSH3-201ENST00000265081 CEP55Q53EZ4 464 aa12.28□□□□□ -0.44
MSH3-201ENST00000265081 SFMBT2Q5VUG0 894 aa12.28□□□□□ -0.44
MSH3-201ENST00000265081 GBP3Q9H0R5 595 aa12.28□□□□□ -0.44
MSH3-201ENST00000265081 ABCB6Q9NP58 842 aa12.28□□□□□ -0.44
MSH3-201ENST00000265081 TSKSQ9UJT2 592 aa12.28□□□□□ -0.44
MSH3-201ENST00000265081 AKAP3O75969 853 aa12.28□□□□□ -0.44
MSH3-201ENST00000265081 MCM3P25205 808 aa12.28□□□□□ -0.44
MSH3-201ENST00000265081 PON1P27169 355 aa12.28□□□□□ -0.44
MSH3-201ENST00000265081 MAPK7Q13164 816 aa12.28□□□□□ -0.44
MSH3-201ENST00000265081 SMCR8Q8TEV9 937 aaPredicted RBP12.28□□□□□ -0.44
MSH3-201ENST00000265081 LSM14BQ9BX40 385 aaKnown RBP12.28□□□□□ -0.44
MSH3-201ENST00000265081 MMRN2Q9H8L6 949 aa12.28□□□□□ -0.44
MSH3-201ENST00000265081 ZNRF3Q9ULT6 936 aa12.28□□□□□ -0.44
MSH3-201ENST00000265081 ENC1O14682 589 aa12.27□□□□□ -0.44
MSH3-201ENST00000265081 NR2F2P24468 414 aa12.27□□□□□ -0.44
MSH3-201ENST00000265081 PABPC4Q13310 644 aaKnown RBP eCLIP12.27□□□□□ -0.44
MSH3-201ENST00000265081 DLGAP5Q15398 846 aa12.27□□□□□ -0.44
MSH3-201ENST00000265081 SLC9C1Q4G0N8 1177 aa12.27□□□□□ -0.44
MSH3-201ENST00000265081 HDXQ7Z353 690 aa12.27□□□□□ -0.44
MSH3-201ENST00000265081 TLR10Q9BXR5 811 aa12.27□□□□□ -0.44
MSH3-201ENST00000265081 WDR11Q9BZH6 1224 aa12.27□□□□□ -0.44
MSH3-201ENST00000265081 MAF1Q9H063 256 aa12.27□□□□□ -0.44
MSH3-201ENST00000265081 EHMT1Q9H9B1 1298 aa12.27□□□□□ -0.44
MSH3-201ENST00000265081 TMOD2Q9NZR1 351 aa12.27□□□□□ -0.44
MSH3-201ENST00000265081 RSPH10B2B2RC85 870 aa12.27□□□□□ -0.45
MSH3-201ENST00000265081 AFPP02771 609 aaKnown RBP12.27□□□□□ -0.45
MSH3-201ENST00000265081 RSPH10BP0C881 870 aa12.27□□□□□ -0.45
MSH3-201ENST00000265081 CCDC40Q4G0X9 1142 aa12.27□□□□□ -0.45
MSH3-201ENST00000265081 C12orf56Q8IXR9 622 aa12.27□□□□□ -0.45
MSH3-201ENST00000265081 ZMYND15Q9H091 742 aa12.27□□□□□ -0.45
MSH3-201ENST00000265081 UNC45AQ9H3U1 944 aa12.27□□□□□ -0.45
MSH3-201ENST00000265081 RNF14Q9UBS8 474 aa12.27□□□□□ -0.45
MSH3-201ENST00000265081 UBIAD1Q9Y5Z9 338 aa12.27□□□□□ -0.45
MSH3-201ENST00000265081 BZW2Q9Y6E2 419 aaKnown RBP12.27□□□□□ -0.45
MSH3-201ENST00000265081 TCP10L2B9ZVM9 353 aa12.27□□□□□ -0.45
MSH3-201ENST00000265081 PES1O00541 588 aaKnown RBP12.27□□□□□ -0.45
MSH3-201ENST00000265081 TACC1O75410 805 aa12.27□□□□□ -0.45
MSH3-201ENST00000265081 NR3C1P04150 777 aa12.27□□□□□ -0.45
MSH3-201ENST00000265081 CYP2C19P33261 490 aa12.27□□□□□ -0.45
MSH3-201ENST00000265081 GFPT1Q06210 699 aaPredicted RBP12.27□□□□□ -0.45
MSH3-201ENST00000265081 TBC1D5Q92609 795 aa12.27□□□□□ -0.45
MSH3-201ENST00000265081 MXRA8Q9BRK3 442 aa12.27□□□□□ -0.45
MSH3-201ENST00000265081 ST6GALNAC4Q9H4F1 302 aa12.27□□□□□ -0.45
MSH3-201ENST00000265081 DBR1Q9UK59 544 aaKnown RBP12.27□□□□□ -0.45
MSH3-201ENST00000265081 ERLIN1O75477 346 aa12.27□□□□□ -0.45
MSH3-201ENST00000265081 GFPT2O94808 682 aa12.27□□□□□ -0.45
MSH3-201ENST00000265081 TCP1P17987 556 aaKnown RBP12.27□□□□□ -0.45
MSH3-201ENST00000265081 CACNB1Q02641 598 aaPredicted RBP12.27□□□□□ -0.45
MSH3-201ENST00000265081 SMC1AQ14683 1233 aaKnown RBP12.27□□□□□ -0.45
MSH3-201ENST00000265081 ZNF720Q7Z2F6 126 aa12.27□□□□□ -0.45
MSH3-201ENST00000265081 CDAN1Q8IWY9 1227 aa12.27□□□□□ -0.45
MSH3-201ENST00000265081 SLC16A10Q8TF71 515 aa12.27□□□□□ -0.45
MSH3-201ENST00000265081 OSBPL9Q96SU4 736 aa12.27□□□□□ -0.45
MSH3-201ENST00000265081 BHMT2Q9H2M3 363 aa12.27□□□□□ -0.45
MSH3-201ENST00000265081 MLXIPQ9HAP2 919 aa12.27□□□□□ -0.45
MSH3-201ENST00000265081 PRDM10Q9NQV6 1147 aa12.27□□□□□ -0.45
MSH3-201ENST00000265081 H3BQF6 201 aa12.26□□□□□ -0.45
MSH3-201ENST00000265081 PMM2O15305 246 aa12.26□□□□□ -0.45
MSH3-201ENST00000265081 MARCH6O60337 910 aa12.26□□□□□ -0.45
MSH3-201ENST00000265081 IPO7O95373 1038 aaKnown RBP12.26□□□□□ -0.45
MSH3-201ENST00000265081 NELFCDQ8IXH7 590 aa12.26□□□□□ -0.45
MSH3-201ENST00000265081 SLC30A5Q8TAD4 765 aa12.26□□□□□ -0.45
MSH3-201ENST00000265081 RBM46Q8TBY0 533 aaKnown RBP12.26□□□□□ -0.45
MSH3-201ENST00000265081 KCNN1Q92952 543 aa12.26□□□□□ -0.45
MSH3-201ENST00000265081 GPR88Q9GZN0 384 aa12.26□□□□□ -0.45
MSH3-201ENST00000265081 TMEM59LQ9UK28 342 aa12.26□□□□□ -0.45
MSH3-201ENST00000265081 INTUQ9ULD6 942 aa12.26□□□□□ -0.45
MSH3-201ENST00000265081 MYH10P35580 1976 aa12.26□□□□□ -0.45
MSH3-201ENST00000265081 ZNFX1Q9P2E3 1918 aaKnown RBP12.26□□□□□ -0.45
MSH3-201ENST00000265081 A0A0A6YYK5 440 aaPredicted RBP12.26□□□□□ -0.45
MSH3-201ENST00000265081 SRGAP2O75044 1071 aa12.26□□□□□ -0.45
MSH3-201ENST00000265081 MEI1Q5TIA1 1274 aa12.26□□□□□ -0.45
MSH3-201ENST00000265081 LRCH2Q5VUJ6 765 aa12.26□□□□□ -0.45
MSH3-201ENST00000265081 PCNX4Q63HM2 1172 aa12.26□□□□□ -0.45
MSH3-201ENST00000265081 AENQ8WTP8 325 aaKnown RBP12.26□□□□□ -0.45
MSH3-201ENST00000265081 LPAR1Q92633 364 aa12.26□□□□□ -0.45
MSH3-201ENST00000265081 DYDC2Q96IM9 177 aa12.26□□□□□ -0.45
MSH3-201ENST00000265081 KIAA1683Q9H0B3 1180 aa12.26□□□□□ -0.45
MSH3-201ENST00000265081 ZKSCAN7Q9P0L1 754 aaPredicted RBP12.26□□□□□ -0.45
MSH3-201ENST00000265081 TBC1D7Q9P0N9 293 aa12.26□□□□□ -0.45
MSH3-201ENST00000265081 HYOU1Q9Y4L1 999 aa12.26□□□□□ -0.45
MSH3-201ENST00000265081 PTPRFP10586 1907 aa12.26□□□□□ -0.45
MSH3-201ENST00000265081 MAPK13O15264 365 aa12.26□□□□□ -0.45
MSH3-201ENST00000265081 MOCS3O95396 460 aa12.26□□□□□ -0.45
MSH3-201ENST00000265081 UCHL3P15374 230 aa12.26□□□□□ -0.45
MSH3-201ENST00000265081 LDHDQ86WU2 507 aa12.26□□□□□ -0.45
MSH3-201ENST00000265081 DAW1Q8N136 415 aa12.26□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 14.7 ms