RNA–Protein interactions for RNA: ENST00000265077.7

VCAN-201, Transcript of versican, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene VCAN, Length 12,625 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCAN-201ENST00000265077 POTEFA5A3E0 1075 aa6.12□□□□□ -1.43
VCAN-201ENST00000265077 CDR2Q01850 454 aa6.12□□□□□ -1.43
VCAN-201ENST00000265077 TCIRG1Q13488 830 aa6.12□□□□□ -1.43
VCAN-201ENST00000265077 GRAMD1BQ3KR37 738 aa6.12□□□□□ -1.43
VCAN-201ENST00000265077 DYMQ7RTS9 669 aa6.12□□□□□ -1.43
VCAN-201ENST00000265077 DDX25Q9UHL0 483 aaKnown RBP6.12□□□□□ -1.43
VCAN-201ENST00000265077 ATRXP46100 2492 aa6.12□□□□□ -1.43
VCAN-201ENST00000265077 WDR19Q8NEZ3 1342 aa6.12□□□□□ -1.43
VCAN-201ENST00000265077 TRPC1P48995 793 aa6.12□□□□□ -1.43
VCAN-201ENST00000265077 RASSF7Q02833 373 aa6.12□□□□□ -1.43
VCAN-201ENST00000265077 C2orf54Q08AI8 447 aa6.12□□□□□ -1.43
VCAN-201ENST00000265077 HADHQ16836 314 aaKnown RBP6.12□□□□□ -1.43
VCAN-201ENST00000265077 TMTC3Q6ZXV5 915 aa6.12□□□□□ -1.43
VCAN-201ENST00000265077 CDKL2Q92772 493 aa6.12□□□□□ -1.43
VCAN-201ENST00000265077 EAF2Q96CJ1 260 aaPredicted RBP6.12□□□□□ -1.43
VCAN-201ENST00000265077 CLIC4Q9Y696 253 aa6.12□□□□□ -1.43
VCAN-201ENST00000265077 DISP1Q96F81 1524 aa6.12□□□□□ -1.43
VCAN-201ENST00000265077 ARID1AO14497 2285 aa6.12□□□□□ -1.43
VCAN-201ENST00000265077 YEATS2Q9ULM3 1422 aa6.12□□□□□ -1.43
VCAN-201ENST00000265077 FGAP02671 866 aa6.12□□□□□ -1.43
VCAN-201ENST00000265077 MMEP08473 750 aa6.12□□□□□ -1.43
VCAN-201ENST00000265077 EXOC3L4Q17RC7 722 aa6.12□□□□□ -1.43
VCAN-201ENST00000265077 AGGF1Q8N302 714 aaeCLIP6.12□□□□□ -1.43
VCAN-201ENST00000265077 OMA1Q96E52 524 aa6.12□□□□□ -1.43
VCAN-201ENST00000265077 SEPT3Q9UH03 358 aa6.12□□□□□ -1.43
VCAN-201ENST00000265077 SYCE1LA8MT33 242 aa6.12□□□□□ -1.43
VCAN-201ENST00000265077 TAF5LO75529 589 aa6.12□□□□□ -1.43
VCAN-201ENST00000265077 UFL1O94874 794 aa6.12□□□□□ -1.43
VCAN-201ENST00000265077 SERPING1P05155 500 aa6.12□□□□□ -1.43
VCAN-201ENST00000265077 POTEIP0CG38 1075 aa6.12□□□□□ -1.43
VCAN-201ENST00000265077 CASP14P31944 242 aa6.12□□□□□ -1.43
VCAN-201ENST00000265077 MDH1P40925 334 aaKnown RBP6.12□□□□□ -1.43
VCAN-201ENST00000265077 MFAP3P55082 362 aa6.12□□□□□ -1.43
VCAN-201ENST00000265077 GOLGA8FQ08AF8 430 aa6.12□□□□□ -1.43
VCAN-201ENST00000265077 GOLGA8DPQ0D2H9 430 aa6.12□□□□□ -1.43
VCAN-201ENST00000265077 TRIM16LQ309B1 348 aa6.12□□□□□ -1.43
VCAN-201ENST00000265077 ZC3H15Q8WU90 426 aaKnown RBP6.12□□□□□ -1.43
VCAN-201ENST00000265077 SEC16BQ96JE7 1060 aa6.12□□□□□ -1.43
VCAN-201ENST00000265077 ELAC2Q9BQ52 826 aaKnown RBP6.12□□□□□ -1.43
VCAN-201ENST00000265077 GALNT8Q9NY28 637 aa6.12□□□□□ -1.43
VCAN-201ENST00000265077 NCOA3Q9Y6Q9 1424 aa6.12□□□□□ -1.43
VCAN-201ENST00000265077 FOSP01100 380 aaPredicted RBP6.12□□□□□ -1.43
VCAN-201ENST00000265077 GCP02774 474 aa6.12□□□□□ -1.43
VCAN-201ENST00000265077 ADD1P35611 737 aaKnown RBP6.12□□□□□ -1.43
VCAN-201ENST00000265077 KIF11P52732 1056 aa6.12□□□□□ -1.43
VCAN-201ENST00000265077 CLIC6Q96NY7 704 aa6.12□□□□□ -1.43
VCAN-201ENST00000265077 SYNGAP1Q96PV0 1343 aa6.12□□□□□ -1.43
VCAN-201ENST00000265077 H0YC42 278 aa6.11□□□□□ -1.43
VCAN-201ENST00000265077 PFDN6O15212 129 aa6.11□□□□□ -1.43
VCAN-201ENST00000265077 PRPF6O94906 941 aaKnown RBP6.11□□□□□ -1.43
VCAN-201ENST00000265077 GAP43P17677 238 aa6.11□□□□□ -1.43
VCAN-201ENST00000265077 KPNA2P52292 529 aaKnown RBP6.11□□□□□ -1.43
VCAN-201ENST00000265077 ADAM9Q13443 819 aa6.11□□□□□ -1.43
VCAN-201ENST00000265077 ARL6IP4Q66PJ3 421 aaKnown RBP6.11□□□□□ -1.43
VCAN-201ENST00000265077 PPP4R3CPQ6ZMV5 832 aa6.11□□□□□ -1.43
VCAN-201ENST00000265077 BTN2A1Q7KYR7 527 aa6.11□□□□□ -1.43
VCAN-201ENST00000265077 YTHDF3Q7Z739 585 aaKnown RBP6.11□□□□□ -1.43
VCAN-201ENST00000265077 TPH2Q8IWU9 490 aa6.11□□□□□ -1.43
VCAN-201ENST00000265077 NEK9Q8TD19 979 aa6.11□□□□□ -1.43
VCAN-201ENST00000265077 CHURC1Q8WUH1 139 aa6.11□□□□□ -1.43
VCAN-201ENST00000265077 ZNF594Q96JF6 807 aaPredicted RBP6.11□□□□□ -1.43
VCAN-201ENST00000265077 CNOT6LQ96LI5 555 aaKnown RBP6.11□□□□□ -1.43
VCAN-201ENST00000265077 ZBED2Q9BTP6 218 aa6.11□□□□□ -1.43
VCAN-201ENST00000265077 ZWILCHQ9H900 591 aa6.11□□□□□ -1.43
VCAN-201ENST00000265077 SAP30BPQ9UHR5 308 aaKnown RBP6.11□□□□□ -1.43
VCAN-201ENST00000265077 TBX22Q9Y458 520 aa6.11□□□□□ -1.43
VCAN-201ENST00000265077 CDHR2Q9BYE9 1310 aa6.11□□□□□ -1.43
VCAN-201ENST00000265077 IGF2BP3O00425 579 aaKnown RBP eCLIP6.11□□□□□ -1.43
VCAN-201ENST00000265077 DAB1O75553 588 aa6.11□□□□□ -1.43
VCAN-201ENST00000265077 DCTN3O75935 186 aa6.11□□□□□ -1.43
VCAN-201ENST00000265077 AP2B1P63010 937 aa6.11□□□□□ -1.43
VCAN-201ENST00000265077 CBX3Q13185 183 aa6.11□□□□□ -1.43
VCAN-201ENST00000265077 ASPRV1Q53RT3 343 aa6.11□□□□□ -1.43
VCAN-201ENST00000265077 ANKRD23Q86SG2 305 aa6.11□□□□□ -1.43
VCAN-201ENST00000265077 PNMA1Q8ND90 353 aa6.11□□□□□ -1.43
VCAN-201ENST00000265077 DEPTORQ8TB45 409 aa6.11□□□□□ -1.43
VCAN-201ENST00000265077 CALML6Q8TD86 181 aa6.11□□□□□ -1.43
VCAN-201ENST00000265077 MAGEC3Q8TD91 643 aa6.11□□□□□ -1.43
VCAN-201ENST00000265077 DDX28Q9NUL7 540 aaKnown RBP6.11□□□□□ -1.43
VCAN-201ENST00000265077 TNKSO95271 1327 aa6.11□□□□□ -1.43
VCAN-201ENST00000265077 RBM47A0AV96 593 aaKnown RBP6.11□□□□□ -1.43
VCAN-201ENST00000265077 TTC4O95801 387 aa6.11□□□□□ -1.43
VCAN-201ENST00000265077 PYGLP06737 847 aa6.11□□□□□ -1.43
VCAN-201ENST00000265077 INHBAP08476 426 aa6.11□□□□□ -1.43
VCAN-201ENST00000265077 PDE6AP16499 860 aa6.11□□□□□ -1.43
VCAN-201ENST00000265077 TNNI1P19237 187 aa6.11□□□□□ -1.43
VCAN-201ENST00000265077 VHLP40337 213 aa6.11□□□□□ -1.43
VCAN-201ENST00000265077 ZNF554Q86TJ5 538 aa6.11□□□□□ -1.43
VCAN-201ENST00000265077 DDHD1Q8NEL9 900 aa6.11□□□□□ -1.43
VCAN-201ENST00000265077 AZI2Q9H6S1 392 aa6.11□□□□□ -1.43
VCAN-201ENST00000265077 GSTA1P08263 222 aa6.11□□□□□ -1.43
VCAN-201ENST00000265077 ABCB4P21439 1286 aa6.11□□□□□ -1.43
VCAN-201ENST00000265077 GSTT1P30711 240 aa6.11□□□□□ -1.43
VCAN-201ENST00000265077 ASPHQ12797 758 aa6.11□□□□□ -1.43
VCAN-201ENST00000265077 DCTN2Q13561 401 aaKnown RBP6.11□□□□□ -1.43
VCAN-201ENST00000265077 FAM26FQ5R3K3 315 aa6.11□□□□□ -1.43
VCAN-201ENST00000265077 TMC5Q6UXY8 1006 aa6.11□□□□□ -1.43
VCAN-201ENST00000265077 P2RX5Q93086 422 aa6.11□□□□□ -1.43
VCAN-201ENST00000265077 CACYBPQ9HB71 228 aaKnown RBP6.11□□□□□ -1.43
VCAN-201ENST00000265077 CCPG1Q9ULG6 757 aa6.11□□□□□ -1.43
Retrieved 100 of 20,778 RNA–protein pairs in 29 ms