RNA–Protein interactions for RNA: ENST00000236671.6

CTSD-201, Transcript of cathepsin D, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene CTSD, Length 2,123 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTSD-201ENST00000236671 SKIDA1Q1XH10 827 aa17.03■□□□□ 0.32
CTSD-201ENST00000236671 CASKIN2Q8WXE0 1202 aa17.03■□□□□ 0.32
CTSD-201ENST00000236671 CCDC43Q96MW1 224 aaKnown RBP17.03■□□□□ 0.32
CTSD-201ENST00000236671 BTNL10A8MVZ5 291 aa17.03■□□□□ 0.32
CTSD-201ENST00000236671 USP17L15C9J2P7 530 aa17.03■□□□□ 0.32
CTSD-201ENST00000236671 USP17L13C9JLJ4 530 aa17.03■□□□□ 0.32
CTSD-201ENST00000236671 USP17L11C9JVI0 530 aa17.03■□□□□ 0.32
CTSD-201ENST00000236671 USP17L18D6R9N7 530 aa17.03■□□□□ 0.32
CTSD-201ENST00000236671 USP17L22D6RA61 530 aa17.03■□□□□ 0.32
CTSD-201ENST00000236671 USP17L17D6RBQ6 530 aa17.03■□□□□ 0.32
CTSD-201ENST00000236671 USP17L19D6RCP7 530 aa17.03■□□□□ 0.32
CTSD-201ENST00000236671 USP17L20D6RJB6 530 aa17.03■□□□□ 0.32
CTSD-201ENST00000236671 G3V3G9 751 aa17.03■□□□□ 0.32
CTSD-201ENST00000236671 STAT3P40763 770 aa17.03■□□□□ 0.32
CTSD-201ENST00000236671 CASP5P51878 434 aa17.03■□□□□ 0.32
CTSD-201ENST00000236671 USP17L24Q0WX57 530 aa17.03■□□□□ 0.32
CTSD-201ENST00000236671 ENOX2Q16206 610 aaKnown RBP17.03■□□□□ 0.32
CTSD-201ENST00000236671 DCAF8Q5TAQ9 597 aa17.03■□□□□ 0.32
CTSD-201ENST00000236671 USP17L6PQ6QN14 398 aa17.03■□□□□ 0.32
CTSD-201ENST00000236671 EFCAB13Q8IY85 973 aa17.03■□□□□ 0.32
CTSD-201ENST00000236671 PPM1EQ8WY54 764 aa17.03■□□□□ 0.32
CTSD-201ENST00000236671 MBOAT7Q96N66 472 aa17.03■□□□□ 0.32
CTSD-201ENST00000236671 PITPNM2Q9BZ72 1349 aa17.03■□□□□ 0.32
CTSD-201ENST00000236671 POTEFA5A3E0 1075 aa17.02■□□□□ 0.32
CTSD-201ENST00000236671 ZNF233A6NK53 670 aa17.02■□□□□ 0.32
CTSD-201ENST00000236671 VGLL3A8MV65 326 aa17.02■□□□□ 0.32
CTSD-201ENST00000236671 CETN3O15182 167 aa17.02■□□□□ 0.32
CTSD-201ENST00000236671 KRT14P02533 472 aa17.02■□□□□ 0.32
CTSD-201ENST00000236671 POTEIP0CG38 1075 aa17.02■□□□□ 0.32
CTSD-201ENST00000236671 NR2F2P24468 414 aa17.02■□□□□ 0.32
CTSD-201ENST00000236671 EPS15P42566 896 aa17.02■□□□□ 0.32
CTSD-201ENST00000236671 PTK2Q05397 1052 aa17.02■□□□□ 0.32
CTSD-201ENST00000236671 POTEGQ6S5H5 508 aa17.02■□□□□ 0.32
CTSD-201ENST00000236671 POTEEQ6S8J3 1075 aa17.02■□□□□ 0.32
CTSD-201ENST00000236671 PACS2Q86VP3 889 aa17.02■□□□□ 0.32
CTSD-201ENST00000236671 NIM1KQ8IY84 436 aa17.02■□□□□ 0.32
CTSD-201ENST00000236671 SH2D3CQ8N5H7 860 aa17.02■□□□□ 0.32
CTSD-201ENST00000236671 USP38Q8NB14 1042 aa17.02■□□□□ 0.32
CTSD-201ENST00000236671 BCAS4Q8TDM0 211 aa17.02■□□□□ 0.32
CTSD-201ENST00000236671 IFT81Q8WYA0 676 aa17.02■□□□□ 0.32
CTSD-201ENST00000236671 JDP2Q8WYK2 163 aa17.02■□□□□ 0.32
CTSD-201ENST00000236671 PIK3R5Q8WYR1 880 aa17.02■□□□□ 0.32
CTSD-201ENST00000236671 DHX36Q9H2U1 1008 aaKnown RBP17.02■□□□□ 0.32
CTSD-201ENST00000236671 TMEM59LQ9UK28 342 aa17.02■□□□□ 0.32
CTSD-201ENST00000236671 HDAC9Q9UKV0 1011 aa17.02■□□□□ 0.32
CTSD-201ENST00000236671 ADAMTSL1Q8N6G6 1762 aa17.02■□□□□ 0.32
CTSD-201ENST00000236671 CYP3A7-CYP3A51PA0A087WV96 503 aa17.02■□□□□ 0.31
CTSD-201ENST00000236671 MYBP10242 640 aa17.02■□□□□ 0.31
CTSD-201ENST00000236671 ACTN1P12814 892 aa17.02■□□□□ 0.31
CTSD-201ENST00000236671 CYP3A7P24462 503 aa17.02■□□□□ 0.31
CTSD-201ENST00000236671 CXCL9Q07325 125 aa17.02■□□□□ 0.31
CTSD-201ENST00000236671 CDC37Q16543 378 aaPredicted RBP17.02■□□□□ 0.31
CTSD-201ENST00000236671 CFAP58Q5T655 872 aa17.02■□□□□ 0.31
CTSD-201ENST00000236671 TTC19Q6DKK2 380 aaPredicted RBP17.02■□□□□ 0.31
CTSD-201ENST00000236671 IRF2BP2Q7Z5L9 587 aa17.02■□□□□ 0.31
CTSD-201ENST00000236671 SUPT20HQ8NEM7 779 aa17.02■□□□□ 0.31
CTSD-201ENST00000236671 ANO3Q9BYT9 981 aa17.02■□□□□ 0.31
CTSD-201ENST00000236671 GJA3Q9Y6H8 435 aa17.02■□□□□ 0.31
CTSD-201ENST00000236671 PSME4Q14997 1843 aa17.01■□□□□ 0.31
CTSD-201ENST00000236671 F8W031 263 aaPredicted RBP17.01■□□□□ 0.31
CTSD-201ENST00000236671 CES2O00748 559 aa17.01■□□□□ 0.31
CTSD-201ENST00000236671 RAD51CO43502 376 aa17.01■□□□□ 0.31
CTSD-201ENST00000236671 DDNO94850 711 aaPredicted RBP17.01■□□□□ 0.31
CTSD-201ENST00000236671 KRT18P05783 430 aaKnown RBP17.01■□□□□ 0.31
CTSD-201ENST00000236671 USP11P51784 963 aa17.01■□□□□ 0.31
CTSD-201ENST00000236671 SPIRE1Q08AE8 756 aa17.01■□□□□ 0.31
CTSD-201ENST00000236671 QRICH1Q2TAL8 776 aa17.01■□□□□ 0.31
CTSD-201ENST00000236671 TTC31Q49AM3 519 aaPredicted RBP17.01■□□□□ 0.31
CTSD-201ENST00000236671 ZNF571Q7Z3V5 609 aaPredicted RBP17.01■□□□□ 0.31
CTSD-201ENST00000236671 CERS5Q8N5B7 392 aa17.01■□□□□ 0.31
CTSD-201ENST00000236671 PLCB1Q9NQ66 1216 aa17.01■□□□□ 0.31
CTSD-201ENST00000236671 MYH4Q9Y623 1939 aa17.01■□□□□ 0.31
CTSD-201ENST00000236671 EBAG9O00559 213 aa17■□□□□ 0.31
CTSD-201ENST00000236671 CPP00450 1065 aa17■□□□□ 0.31
CTSD-201ENST00000236671 SLC9A1P19634 815 aa17■□□□□ 0.31
CTSD-201ENST00000236671 HOXD13P35453 343 aa17■□□□□ 0.31
CTSD-201ENST00000236671 GUCY2FP51841 1108 aa17■□□□□ 0.31
CTSD-201ENST00000236671 TNNC1P63316 161 aa17■□□□□ 0.31
CTSD-201ENST00000236671 TRADDQ15628 312 aa17■□□□□ 0.31
CTSD-201ENST00000236671 C10orf76Q5T2E6 689 aa17■□□□□ 0.31
CTSD-201ENST00000236671 KCTD16Q68DU8 428 aa17■□□□□ 0.31
CTSD-201ENST00000236671 FRMD5Q7Z6J6 570 aa17■□□□□ 0.31
CTSD-201ENST00000236671 CD302Q8IX05 232 aa17■□□□□ 0.31
CTSD-201ENST00000236671 WHAMMQ8TF30 809 aa17■□□□□ 0.31
CTSD-201ENST00000236671 FAM107BQ9H098 131 aa17■□□□□ 0.31
CTSD-201ENST00000236671 GLT8D2Q9H1C3 349 aa17■□□□□ 0.31
CTSD-201ENST00000236671 RABEP2Q9H5N1 569 aa17■□□□□ 0.31
CTSD-201ENST00000236671 TRAF3IP3Q9Y228 551 aa17■□□□□ 0.31
CTSD-201ENST00000236671 SUGT1Q9Y2Z0 365 aa17■□□□□ 0.31
CTSD-201ENST00000236671 DCAF8L1A6NGE4 600 aa17■□□□□ 0.31
CTSD-201ENST00000236671 A6NNZ2 444 aa17■□□□□ 0.31
CTSD-201ENST00000236671 MPHOSPH10O00566 681 aaKnown RBP17■□□□□ 0.31
CTSD-201ENST00000236671 UCHL3P15374 230 aa17■□□□□ 0.31
CTSD-201ENST00000236671 NOP2P46087 812 aaKnown RBP17■□□□□ 0.31
CTSD-201ENST00000236671 RNASE9P60153 205 aaKnown RBP17■□□□□ 0.31
CTSD-201ENST00000236671 PDCLQ13371 301 aa17■□□□□ 0.31
CTSD-201ENST00000236671 GIT2Q14161 759 aa17■□□□□ 0.31
CTSD-201ENST00000236671 TUBB8Q3ZCM7 444 aa17■□□□□ 0.31
CTSD-201ENST00000236671 EPM2AIP1Q7L775 607 aaPredicted RBP17■□□□□ 0.31
CTSD-201ENST00000236671 CATSPER3Q86XQ3 398 aa17■□□□□ 0.31
Retrieved 100 of 20,778 RNA–protein pairs in 12 ms