RNA–Protein interactions for RNA: ENST00000228918.8

LTBR-201, Transcript of lymphotoxin beta receptor, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene LTBR, Length 2,260 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LTBR-201ENST00000228918 SREBF1P36956 1147 aa17.83■□□□□ 0.44
LTBR-201ENST00000228918 SF3B2Q13435 895 aaKnown RBP17.83■□□□□ 0.44
LTBR-201ENST00000228918 SIAH1Q8IUQ4 282 aa17.83■□□□□ 0.44
LTBR-201ENST00000228918 MREGQ8N565 214 aa17.83■□□□□ 0.44
LTBR-201ENST00000228918 ZDHHC15Q96MV8 337 aa17.83■□□□□ 0.44
LTBR-201ENST00000228918 TMEM59LQ9UK28 342 aa17.83■□□□□ 0.44
LTBR-201ENST00000228918 STK24Q9Y6E0 443 aa17.83■□□□□ 0.44
LTBR-201ENST00000228918 ASTN1O14525 1302 aa17.82■□□□□ 0.44
LTBR-201ENST00000228918 DDTLA6NHG4 134 aaPredicted RBP17.82■□□□□ 0.44
LTBR-201ENST00000228918 AKAP3O75969 853 aa17.82■□□□□ 0.44
LTBR-201ENST00000228918 FAM153BP0C7A2 387 aa17.82■□□□□ 0.44
LTBR-201ENST00000228918 PRKCIP41743 596 aa17.82■□□□□ 0.44
LTBR-201ENST00000228918 CACNB3P54284 484 aa17.82■□□□□ 0.44
LTBR-201ENST00000228918 EPHA7Q15375 998 aa17.82■□□□□ 0.44
LTBR-201ENST00000228918 FAM153CQ494X1 144 aa17.82■□□□□ 0.44
LTBR-201ENST00000228918 RBM46Q8TBY0 533 aaKnown RBP17.82■□□□□ 0.44
LTBR-201ENST00000228918 CASKIN2Q8WXE0 1202 aa17.82■□□□□ 0.44
LTBR-201ENST00000228918 FAM20AQ96MK3 541 aa17.82■□□□□ 0.44
LTBR-201ENST00000228918 TYW1Q9NV66 732 aaKnown RBP17.82■□□□□ 0.44
LTBR-201ENST00000228918 FAM153AQ9UHL3 310 aa17.82■□□□□ 0.44
LTBR-201ENST00000228918 RSPH10B2B2RC85 870 aa17.82■□□□□ 0.44
LTBR-201ENST00000228918 RSPH10BP0C881 870 aa17.82■□□□□ 0.44
LTBR-201ENST00000228918 MMP14P50281 582 aa17.82■□□□□ 0.44
LTBR-201ENST00000228918 SNAP25P60880 206 aa17.82■□□□□ 0.44
LTBR-201ENST00000228918 TNNC1P63316 161 aa17.82■□□□□ 0.44
LTBR-201ENST00000228918 SKOR1P84550 965 aa17.82■□□□□ 0.44
LTBR-201ENST00000228918 ICA1Q05084 483 aa17.82■□□□□ 0.44
LTBR-201ENST00000228918 TCP10Q12799 353 aa17.82■□□□□ 0.44
LTBR-201ENST00000228918 DCAF17Q5H9S7 520 aaPredicted RBP17.82■□□□□ 0.44
LTBR-201ENST00000228918 SLC27A3Q5K4L6 730 aa17.82■□□□□ 0.44
LTBR-201ENST00000228918 IQCKQ8N0W5 287 aa17.82■□□□□ 0.44
LTBR-201ENST00000228918 TAF4BQ92750 862 aa17.82■□□□□ 0.44
LTBR-201ENST00000228918 CCDC43Q96MW1 224 aaKnown RBP17.82■□□□□ 0.44
LTBR-201ENST00000228918 NAGPAQ9UK23 515 aa17.82■□□□□ 0.44
LTBR-201ENST00000228918 FBXL5Q9UKA1 691 aa17.82■□□□□ 0.44
LTBR-201ENST00000228918 VAV3Q9UKW4 847 aa17.82■□□□□ 0.44
LTBR-201ENST00000228918 NENFQ9UMX5 172 aa17.82■□□□□ 0.44
LTBR-201ENST00000228918 ATP8B3O60423 1300 aa17.81■□□□□ 0.44
LTBR-201ENST00000228918 SPDYE3A6NKU9 549 aa17.81■□□□□ 0.44
LTBR-201ENST00000228918 EIF3HO15372 352 aaKnown RBP eCLIP17.81■□□□□ 0.44
LTBR-201ENST00000228918 SLC16A3O15427 465 aaKnown RBP17.81■□□□□ 0.44
LTBR-201ENST00000228918 KIF4AO95239 1232 aa17.81■□□□□ 0.44
LTBR-201ENST00000228918 FOSP01100 380 aaPredicted RBP17.81■□□□□ 0.44
LTBR-201ENST00000228918 NR3C1P04150 777 aa17.81■□□□□ 0.44
LTBR-201ENST00000228918 CIITAP33076 1130 aa17.81■□□□□ 0.44
LTBR-201ENST00000228918 CORO7P57737 925 aa17.81■□□□□ 0.44
LTBR-201ENST00000228918 RPS6KA1Q15418 735 aa17.81■□□□□ 0.44
LTBR-201ENST00000228918 USH1GQ495M9 461 aa17.81■□□□□ 0.44
LTBR-201ENST00000228918 TATDN1Q6P1N9 297 aa17.81■□□□□ 0.44
LTBR-201ENST00000228918 FBXO11Q86XK2 927 aa17.81■□□□□ 0.44
LTBR-201ENST00000228918 IFT81Q8WYA0 676 aa17.81■□□□□ 0.44
LTBR-201ENST00000228918 SIX2Q9NPC8 291 aa17.81■□□□□ 0.44
LTBR-201ENST00000228918 PI4KBQ9UBF8 816 aa17.81■□□□□ 0.44
LTBR-201ENST00000228918 FAM198AQ9UFP1 575 aa17.81■□□□□ 0.44
LTBR-201ENST00000228918 PCDHAC2Q9Y5I4 1007 aa17.81■□□□□ 0.44
LTBR-201ENST00000228918 COL11A2P13942 1736 aaPredicted RBP17.81■□□□□ 0.44
LTBR-201ENST00000228918 MSH4O15457 936 aa17.81■□□□□ 0.44
LTBR-201ENST00000228918 RAD51CO43502 376 aa17.81■□□□□ 0.44
LTBR-201ENST00000228918 ANXA13P27216 316 aa17.81■□□□□ 0.44
LTBR-201ENST00000228918 GNGT1P63211 74 aa17.81■□□□□ 0.44
LTBR-201ENST00000228918 DNAJC21Q5F1R6 531 aaKnown RBP17.81■□□□□ 0.44
LTBR-201ENST00000228918 CFAP58Q5T655 872 aa17.81■□□□□ 0.44
LTBR-201ENST00000228918 SH3BP5LQ7L8J4 393 aa17.81■□□□□ 0.44
LTBR-201ENST00000228918 LRRC57Q8N9N7 239 aa17.81■□□□□ 0.44
LTBR-201ENST00000228918 RUSC1Q9BVN2 902 aa17.81■□□□□ 0.44
LTBR-201ENST00000228918 METTL14Q9HCE5 456 aaKnown RBP17.81■□□□□ 0.44
LTBR-201ENST00000228918 AJAP1Q9UKB5 411 aaPredicted RBP17.81■□□□□ 0.44
LTBR-201ENST00000228918 F5H6K3 240 aa17.8■□□□□ 0.44
LTBR-201ENST00000228918 KCNK3O14649 394 aa17.8■□□□□ 0.44
LTBR-201ENST00000228918 JAM2P57087 298 aa17.8■□□□□ 0.44
LTBR-201ENST00000228918 RNASE9P60153 205 aaKnown RBP17.8■□□□□ 0.44
LTBR-201ENST00000228918 CYP4A11Q02928 519 aa17.8■□□□□ 0.44
LTBR-201ENST00000228918 KLRC3Q07444 240 aa17.8■□□□□ 0.44
LTBR-201ENST00000228918 IFI16Q16666 785 aaKnown RBP17.8■□□□□ 0.44
LTBR-201ENST00000228918 TMEM179Q6ZVK1 233 aa17.8■□□□□ 0.44
LTBR-201ENST00000228918 GMCL1P1Q8NEA9 526 aa17.8■□□□□ 0.44
LTBR-201ENST00000228918 WHAMMQ8TF30 809 aa17.8■□□□□ 0.44
LTBR-201ENST00000228918 SLC35C1Q96A29 364 aa17.8■□□□□ 0.44
LTBR-201ENST00000228918 GMCL1Q96IK5 515 aa17.8■□□□□ 0.44
LTBR-201ENST00000228918 IDI2Q9BXS1 227 aa17.8■□□□□ 0.44
LTBR-201ENST00000228918 BHMT2Q9H2M3 363 aa17.8■□□□□ 0.44
LTBR-201ENST00000228918 G3V3G9 751 aa17.79■□□□□ 0.44
LTBR-201ENST00000228918 KRT14P02533 472 aa17.79■□□□□ 0.44
LTBR-201ENST00000228918 NPR1P16066 1061 aa17.79■□□□□ 0.44
LTBR-201ENST00000228918 RPL13P26373 211 aaKnown RBP17.79■□□□□ 0.44
LTBR-201ENST00000228918 CASP4P49662 377 aa17.79■□□□□ 0.44
LTBR-201ENST00000228918 DCAF8Q5TAQ9 597 aa17.79■□□□□ 0.44
LTBR-201ENST00000228918 SYDE2Q5VT97 1194 aa17.79■□□□□ 0.44
LTBR-201ENST00000228918 ALKBH5Q6P6C2 394 aaKnown RBP17.79■□□□□ 0.44
LTBR-201ENST00000228918 PIK3R5Q8WYR1 880 aa17.79■□□□□ 0.44
LTBR-201ENST00000228918 PBKQ96KB5 322 aa17.79■□□□□ 0.44
LTBR-201ENST00000228918 POLR3CQ9BUI4 534 aaPredicted RBP17.79■□□□□ 0.44
LTBR-201ENST00000228918 ZNF233A6NK53 670 aa17.79■□□□□ 0.44
LTBR-201ENST00000228918 OPLAHO14841 1288 aa17.79■□□□□ 0.44
LTBR-201ENST00000228918 ONECUT3O60422 494 aaPredicted RBP17.79■□□□□ 0.44
LTBR-201ENST00000228918 TBCAO75347 108 aaKnown RBP17.79■□□□□ 0.44
LTBR-201ENST00000228918 FLOT1O75955 427 aa17.79■□□□□ 0.44
LTBR-201ENST00000228918 GCNT3O95395 438 aa17.79■□□□□ 0.44
LTBR-201ENST00000228918 EYA4O95677 639 aa17.79■□□□□ 0.44
LTBR-201ENST00000228918 NDUFB10O96000 172 aa17.79■□□□□ 0.44
Retrieved 100 of 20,778 RNA–protein pairs in 36.8 ms