RNA–Protein interactions for RNA: ENST00000216484.6

SPTLC2-201, Transcript of serine palmitoyltransferase long chain base subunit 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SPTLC2, Length 8,170 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPTLC2-201ENST00000216484 OR52Z1P0C646 297 aa15.64■□□□□ 0.09
SPTLC2-201ENST00000216484 PSMC2P35998 433 aaKnown RBP15.64■□□□□ 0.09
SPTLC2-201ENST00000216484 LRRC47Q8N1G4 583 aaKnown RBP15.64■□□□□ 0.09
SPTLC2-201ENST00000216484 SMAD5Q99717 465 aaKnown RBP15.64■□□□□ 0.09
SPTLC2-201ENST00000216484 UBE2TQ9NPD8 197 aaPredicted RBP15.64■□□□□ 0.09
SPTLC2-201ENST00000216484 MRPL11Q9Y3B7 192 aaKnown RBP15.64■□□□□ 0.09
SPTLC2-201ENST00000216484 ACEP12821 1306 aa15.64■□□□□ 0.09
SPTLC2-201ENST00000216484 RASA4BC9J798 803 aa15.63■□□□□ 0.09
SPTLC2-201ENST00000216484 RASA4O43374 803 aa15.63■□□□□ 0.09
SPTLC2-201ENST00000216484 TJP3O95049 919 aa15.63■□□□□ 0.09
SPTLC2-201ENST00000216484 NR2F2P24468 414 aa15.63■□□□□ 0.09
SPTLC2-201ENST00000216484 LRRC74AQ0VAA2 488 aa15.63■□□□□ 0.09
SPTLC2-201ENST00000216484 STXBP2Q15833 593 aa15.63■□□□□ 0.09
SPTLC2-201ENST00000216484 BZW1Q7L1Q6 419 aaKnown RBP15.63■□□□□ 0.09
SPTLC2-201ENST00000216484 USP28Q96RU2 1077 aa15.63■□□□□ 0.09
SPTLC2-201ENST00000216484 TMEM191CA6NGB0 347 aa15.63■□□□□ 0.09
SPTLC2-201ENST00000216484 GOLGA8FQ08AF8 430 aa15.63■□□□□ 0.09
SPTLC2-201ENST00000216484 MMS22LQ6ZRQ5 1243 aa15.63■□□□□ 0.09
SPTLC2-201ENST00000216484 OSBPL1AQ9BXW6 950 aa15.63■□□□□ 0.09
SPTLC2-201ENST00000216484 DCTN4Q9UJW0 460 aa15.63■□□□□ 0.09
SPTLC2-201ENST00000216484 ZNF827Q17R98 1081 aa15.63■□□□□ 0.09
SPTLC2-201ENST00000216484 NIM1KQ8IY84 436 aa15.63■□□□□ 0.09
SPTLC2-201ENST00000216484 PDIK1LQ8N165 341 aa15.63■□□□□ 0.09
SPTLC2-201ENST00000216484 ZNF513Q8N8E2 541 aaPredicted RBP15.63■□□□□ 0.09
SPTLC2-201ENST00000216484 CDC23Q9UJX2 597 aa15.63■□□□□ 0.09
SPTLC2-201ENST00000216484 ATAD2BQ9ULI0 1458 aa15.63■□□□□ 0.09
SPTLC2-201ENST00000216484 HEXIM2Q96MH2 286 aaKnown RBP15.63■□□□□ 0.09
SPTLC2-201ENST00000216484 BBS9Q3SYG4 887 aa15.63■□□□□ 0.09
SPTLC2-201ENST00000216484 TADA2BQ86TJ2 420 aa15.63■□□□□ 0.09
SPTLC2-201ENST00000216484 SRPK1Q96SB4 655 aaKnown RBP15.63■□□□□ 0.09
SPTLC2-201ENST00000216484 DNAJC7Q99615 494 aa15.63■□□□□ 0.09
SPTLC2-201ENST00000216484 NDE1Q9NXR1 346 aa15.63■□□□□ 0.09
SPTLC2-201ENST00000216484 CFAP69A5D8W1 941 aa15.63■□□□□ 0.09
SPTLC2-201ENST00000216484 RECQLP46063 649 aaPredicted RBP15.63■□□□□ 0.09
SPTLC2-201ENST00000216484 ETF1P62495 437 aaKnown RBP15.63■□□□□ 0.09
SPTLC2-201ENST00000216484 DDIASQ8IXT1 998 aa15.63■□□□□ 0.09
SPTLC2-201ENST00000216484 SPATA5Q8NB90 893 aa15.63■□□□□ 0.09
SPTLC2-201ENST00000216484 CYGBQ8WWM9 190 aa15.63■□□□□ 0.09
SPTLC2-201ENST00000216484 SH3KBP1Q96B97 665 aa15.63■□□□□ 0.09
SPTLC2-201ENST00000216484 NDUFB9Q9Y6M9 179 aa15.63■□□□□ 0.09
SPTLC2-201ENST00000216484 GFPT2O94808 682 aa15.62■□□□□ 0.09
SPTLC2-201ENST00000216484 NDUFA8P51970 172 aa15.62■□□□□ 0.09
SPTLC2-201ENST00000216484 EIF3BP55884 814 aaKnown RBP15.62■□□□□ 0.09
SPTLC2-201ENST00000216484 SNAP25P60880 206 aa15.62■□□□□ 0.09
SPTLC2-201ENST00000216484 CCDC103Q8IW40 242 aa15.62■□□□□ 0.09
SPTLC2-201ENST00000216484 ANKRD49Q8WVL7 239 aa15.62■□□□□ 0.09
SPTLC2-201ENST00000216484 LARP4BQ92615 738 aaKnown RBP15.62■□□□□ 0.09
SPTLC2-201ENST00000216484 SLC13A1Q9BZW2 595 aa15.62■□□□□ 0.09
SPTLC2-201ENST00000216484 ZNF556Q9HAH1 456 aa15.62■□□□□ 0.09
SPTLC2-201ENST00000216484 TBC1D4O60343 1298 aa15.62■□□□□ 0.09
SPTLC2-201ENST00000216484 TOMM70O94826 608 aa15.62■□□□□ 0.09
SPTLC2-201ENST00000216484 MYL1P05976 194 aa15.62■□□□□ 0.09
SPTLC2-201ENST00000216484 ELF1P32519 619 aa15.62■□□□□ 0.09
SPTLC2-201ENST00000216484 RBM6P78332 1123 aaKnown RBP15.62■□□□□ 0.09
SPTLC2-201ENST00000216484 OLFML2BQ68BL8 750 aa15.62■□□□□ 0.09
SPTLC2-201ENST00000216484 DPP9Q86TI2 863 aa15.62■□□□□ 0.09
SPTLC2-201ENST00000216484 SYMPKQ92797 1274 aaKnown RBP15.62■□□□□ 0.09
SPTLC2-201ENST00000216484 BRD8Q9H0E9 1235 aa15.62■□□□□ 0.09
SPTLC2-201ENST00000216484 RGL1Q9NZL6 768 aa15.62■□□□□ 0.09
SPTLC2-201ENST00000216484 STOML1Q9UBI4 398 aa15.62■□□□□ 0.09
SPTLC2-201ENST00000216484 STK17AQ9UEE5 414 aa15.62■□□□□ 0.09
SPTLC2-201ENST00000216484 ANKRD36BQ8N2N9 1353 aa15.62■□□□□ 0.09
SPTLC2-201ENST00000216484 NFIBO00712 420 aa15.62■□□□□ 0.09
SPTLC2-201ENST00000216484 SEC24BO95487 1268 aa15.62■□□□□ 0.09
SPTLC2-201ENST00000216484 IL10P22301 178 aa15.62■□□□□ 0.09
SPTLC2-201ENST00000216484 CASP14P31944 242 aa15.62■□□□□ 0.09
SPTLC2-201ENST00000216484 COPB1P53618 953 aaKnown RBP15.62■□□□□ 0.09
SPTLC2-201ENST00000216484 RCSD1Q6JBY9 416 aa15.62■□□□□ 0.09
SPTLC2-201ENST00000216484 FAM133AQ8N9E0 248 aa15.62■□□□□ 0.09
SPTLC2-201ENST00000216484 SLC17A8Q8NDX2 589 aa15.62■□□□□ 0.09
SPTLC2-201ENST00000216484 FTCDO95954 541 aa15.62■□□□□ 0.09
SPTLC2-201ENST00000216484 PTGDRQ13258 359 aa15.62■□□□□ 0.09
SPTLC2-201ENST00000216484 SULF1Q8IWU6 871 aa15.62■□□□□ 0.09
SPTLC2-201ENST00000216484 EGFL8Q99944 293 aa15.62■□□□□ 0.09
SPTLC2-201ENST00000216484 PKD2L2Q9NZM6 624 aa15.62■□□□□ 0.09
SPTLC2-201ENST00000216484 TIAM1Q13009 1591 aa15.62■□□□□ 0.09
SPTLC2-201ENST00000216484 PLCH2O75038 1416 aa15.62■□□□□ 0.09
SPTLC2-201ENST00000216484 ST13P50502 369 aaKnown RBP15.62■□□□□ 0.09
SPTLC2-201ENST00000216484 BFSP2Q13515 415 aa15.62■□□□□ 0.09
SPTLC2-201ENST00000216484 TRIP4Q15650 581 aaPredicted RBP15.62■□□□□ 0.09
SPTLC2-201ENST00000216484 KIAA1755Q5JYT7 1200 aa15.62■□□□□ 0.09
SPTLC2-201ENST00000216484 CHMP1BQ7LBR1 199 aa15.62■□□□□ 0.09
SPTLC2-201ENST00000216484 FAM161BQ96MY7 647 aa15.62■□□□□ 0.09
SPTLC2-201ENST00000216484 RNPEPQ9H4A4 650 aa15.62■□□□□ 0.09
SPTLC2-201ENST00000216484 NIPSNAP3AQ9UFN0 247 aaPredicted RBP15.62■□□□□ 0.09
SPTLC2-201ENST00000216484 MYO1DO94832 1006 aa15.62■□□□□ 0.09
SPTLC2-201ENST00000216484 CD58P19256 250 aa15.62■□□□□ 0.09
SPTLC2-201ENST00000216484 NEK9Q8TD19 979 aa15.62■□□□□ 0.09
SPTLC2-201ENST00000216484 SCG3Q8WXD2 468 aaKnown RBP15.62■□□□□ 0.09
SPTLC2-201ENST00000216484 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP15.62■□□□□ 0.095e-9■■■■■ 39.9
SPTLC2-201ENST00000216484 KLHL8Q9P2G9 620 aaPredicted RBP15.62■□□□□ 0.09
SPTLC2-201ENST00000216484 KMT5AQ9NQR1 393 aa15.61■□□□□ 0.09
SPTLC2-201ENST00000216484 IL2RBP14784 551 aa15.61■□□□□ 0.09
SPTLC2-201ENST00000216484 DLGAP5Q15398 846 aa15.61■□□□□ 0.09
SPTLC2-201ENST00000216484 PLA2G4DQ86XP0 818 aa15.61■□□□□ 0.09
SPTLC2-201ENST00000216484 SOX13Q9UN79 622 aa15.61■□□□□ 0.09
SPTLC2-201ENST00000216484 E7EWF7 191 aa15.61■□□□□ 0.09
SPTLC2-201ENST00000216484 RHOBTB1O94844 696 aa15.61■□□□□ 0.09
SPTLC2-201ENST00000216484 PSMA2P25787 234 aa15.61■□□□□ 0.09
SPTLC2-201ENST00000216484 OSTNP61366 133 aa15.61■□□□□ 0.09
Retrieved 100 of 20,778 RNA–protein pairs in 20.6 ms