RNA–Protein interactions for RNA: ENSMUST00000108908.5

Scn8a-203, Transcript of Sodium channel protein type 8 subunit alpha, mousemouse

APPRIS ALT1 TSL 5 BASIC

Gene Scn8a, Length 7,030 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Scn8a-203ENSMUST00000108908 Miga1Q4QQM5 600 aa11.9□□□□□ -0.5
Scn8a-203ENSMUST00000108908 Pabpc4Q6PHQ9 660 aaKnown RBP11.9□□□□□ -0.5
Scn8a-203ENSMUST00000108908 Gbp9Q8BTS3 619 aa11.9□□□□□ -0.5
Scn8a-203ENSMUST00000108908 Runx2Q08775 607 aa11.9□□□□□ -0.5
Scn8a-203ENSMUST00000108908 Lmntd2Q0VET5 664 aa11.9□□□□□ -0.5
Scn8a-203ENSMUST00000108908 Atg9aQ68FE2 551 aa11.9□□□□□ -0.5
Scn8a-203ENSMUST00000108908 Ccdc15Q8C9M2 810 aa11.9□□□□□ -0.5
Scn8a-203ENSMUST00000108908 Serpini1O35684 410 aa11.9□□□□□ -0.5
Scn8a-203ENSMUST00000108908 Snx19Q6P4T1 997 aa11.9□□□□□ -0.5
Scn8a-203ENSMUST00000108908 Uba6Q8C7R4 1053 aa11.9□□□□□ -0.5
Scn8a-203ENSMUST00000108908 Tbc1d19Q8VDV7 526 aa11.9□□□□□ -0.5
Scn8a-203ENSMUST00000108908 SyncQ9EPM5 470 aa11.9□□□□□ -0.5
Scn8a-203ENSMUST00000108908 Vps33bP59016 617 aa11.9□□□□□ -0.51
Scn8a-203ENSMUST00000108908 Polr3eQ9CZT4 710 aa11.9□□□□□ -0.51
Scn8a-203ENSMUST00000108908 L1camP11627 1260 aa11.89□□□□□ -0.51
Scn8a-203ENSMUST00000108908 Cyp19a1P28649 503 aa11.89□□□□□ -0.51
Scn8a-203ENSMUST00000108908 Fam81aQ3UXZ6 364 aa11.89□□□□□ -0.51
Scn8a-203ENSMUST00000108908 Serpinb3dQ6UKZ0 387 aa11.89□□□□□ -0.51
Scn8a-203ENSMUST00000108908 Fnbp1Q80TY0 616 aa11.89□□□□□ -0.51
Scn8a-203ENSMUST00000108908 Acat1Q8QZT1 424 aa11.89□□□□□ -0.51
Scn8a-203ENSMUST00000108908 Zc3h4Q6ZPZ3 1304 aaKnown RBP11.89□□□□□ -0.51
Scn8a-203ENSMUST00000108908 Kcnh2O35219 1162 aa11.89□□□□□ -0.51
Scn8a-203ENSMUST00000108908 Igfbp4P47879 254 aa11.89□□□□□ -0.51
Scn8a-203ENSMUST00000108908 OtulinQ3UCV8 352 aa11.89□□□□□ -0.51
Scn8a-203ENSMUST00000108908 Glis3Q6XP49 780 aa11.89□□□□□ -0.51
Scn8a-203ENSMUST00000108908 Taco1Q8K0Z7 294 aaKnown RBP11.89□□□□□ -0.51
Scn8a-203ENSMUST00000108908 Foxo4Q9WVH3 505 aa11.89□□□□□ -0.51
Scn8a-203ENSMUST00000108908 Gadd45gQ9Z111 159 aa11.89□□□□□ -0.51
Scn8a-203ENSMUST00000108908 Kcnh4A2A5F7 1018 aa11.89□□□□□ -0.51
Scn8a-203ENSMUST00000108908 Hspa1lP16627 641 aa11.89□□□□□ -0.51
Scn8a-203ENSMUST00000108908 Zc3h18Q0P678 948 aaKnown RBP11.89□□□□□ -0.51
Scn8a-203ENSMUST00000108908 Doc2gQ9ESN1 387 aa11.89□□□□□ -0.51
Scn8a-203ENSMUST00000108908 Mical3Q8CJ19 1993 aa11.89□□□□□ -0.51
Scn8a-203ENSMUST00000108908 Znf12Q7TSI0 686 aa11.89□□□□□ -0.51
Scn8a-203ENSMUST00000108908 Rbbp5Q8BX09 538 aaKnown RBP11.89□□□□□ -0.51
Scn8a-203ENSMUST00000108908 Slc7a14Q8BXR1 771 aa11.89□□□□□ -0.51
Scn8a-203ENSMUST00000108908 Tcp10bE9PYJ0 438 aa11.89□□□□□ -0.51
Scn8a-203ENSMUST00000108908 Vgll3P85442 326 aa11.89□□□□□ -0.51
Scn8a-203ENSMUST00000108908 Ush1gQ80T11 461 aa11.89□□□□□ -0.51
Scn8a-203ENSMUST00000108908 Gprasp2Q8BUY8 826 aa11.89□□□□□ -0.51
Scn8a-203ENSMUST00000108908 Golph3lQ8R088 285 aaKnown RBP11.89□□□□□ -0.51
Scn8a-203ENSMUST00000108908 MbipQ99LQ1 341 aa11.89□□□□□ -0.51
Scn8a-203ENSMUST00000108908 Nme9A0A1L1SUL6 329 aa11.88□□□□□ -0.51
Scn8a-203ENSMUST00000108908 Actn4P57780 912 aaKnown RBP11.88□□□□□ -0.51
Scn8a-203ENSMUST00000108908 Mark2Q05512 776 aa11.88□□□□□ -0.51
Scn8a-203ENSMUST00000108908 NntQ61941 1086 aaKnown RBP11.88□□□□□ -0.51
Scn8a-203ENSMUST00000108908 Ccdc159Q8C963 411 aa11.88□□□□□ -0.51
Scn8a-203ENSMUST00000108908 Inpp5fQ8CDA1 1132 aa11.88□□□□□ -0.51
Scn8a-203ENSMUST00000108908 Plekha4Q8VC98 588 aa11.88□□□□□ -0.51
Scn8a-203ENSMUST00000108908 Gimap4Q99JY3 219 aa11.88□□□□□ -0.51
Scn8a-203ENSMUST00000108908 Rbm31yQ9D3U4 565 aa11.88□□□□□ -0.51
Scn8a-203ENSMUST00000108908 Slc2a5Q9WV38 501 aa11.88□□□□□ -0.51
Scn8a-203ENSMUST00000108908 PtgdrP70263 357 aa11.88□□□□□ -0.51
Scn8a-203ENSMUST00000108908 SpertQ32MG2 446 aa11.88□□□□□ -0.51
Scn8a-203ENSMUST00000108908 CalcbQ99MP3 130 aa11.88□□□□□ -0.51
Scn8a-203ENSMUST00000108908 Zcchc17Q9ESX4 241 aaKnown RBP11.88□□□□□ -0.51
Scn8a-203ENSMUST00000108908 Mdh1P14152 334 aa11.88□□□□□ -0.51
Scn8a-203ENSMUST00000108908 C2cd5Q7TPS5 1016 aaKnown RBP11.88□□□□□ -0.51
Scn8a-203ENSMUST00000108908 AdalQ80SY6 360 aa11.88□□□□□ -0.51
Scn8a-203ENSMUST00000108908 Rps6ka5Q8C050 863 aa11.88□□□□□ -0.51
Scn8a-203ENSMUST00000108908 Hyou1Q9JKR6 999 aaKnown RBP11.88□□□□□ -0.51
Scn8a-203ENSMUST00000108908 Tnip3A0A1D5RMN0 279 aa11.88□□□□□ -0.51
Scn8a-203ENSMUST00000108908 C87977A2A958 498 aa11.88□□□□□ -0.51
Scn8a-203ENSMUST00000108908 Nova2D3YVV7 556 aaKnown RBP11.88□□□□□ -0.51
Scn8a-203ENSMUST00000108908 Usp35M0QWN7 1009 aa11.88□□□□□ -0.51
Scn8a-203ENSMUST00000108908 Otud5Q3U2S4 566 aa11.88□□□□□ -0.51
Scn8a-203ENSMUST00000108908 Ttbk2Q3UVR3 1243 aa11.88□□□□□ -0.51
Scn8a-203ENSMUST00000108908 NfrkbQ6PIJ4 1296 aaKnown RBP11.88□□□□□ -0.51
Scn8a-203ENSMUST00000108908 Olfr1415Q7TQS4 311 aa11.88□□□□□ -0.51
Scn8a-203ENSMUST00000108908 FtoQ8BGW1 502 aa11.88□□□□□ -0.51
Scn8a-203ENSMUST00000108908 Cnot10Q8BH15 744 aa11.88□□□□□ -0.51
Scn8a-203ENSMUST00000108908 Fam160b1Q8CDM8 764 aa11.88□□□□□ -0.51
Scn8a-203ENSMUST00000108908 HscbQ8K3A0 234 aa11.88□□□□□ -0.51
Scn8a-203ENSMUST00000108908 Hip1Q8VD75 1029 aaKnown RBP11.88□□□□□ -0.51
Scn8a-203ENSMUST00000108908 Olfr1416Q8VGU4 312 aa11.88□□□□□ -0.51
Scn8a-203ENSMUST00000108908 Tmem132aQ922P8 1018 aa11.88□□□□□ -0.51
Scn8a-203ENSMUST00000108908 Gps1Q99LD4 471 aaKnown RBP11.88□□□□□ -0.51
Scn8a-203ENSMUST00000108908 Cyp2s1Q9DBX6 501 aa11.88□□□□□ -0.51
Scn8a-203ENSMUST00000108908 Cyth1Q9QX11 398 aa11.88□□□□□ -0.51
Scn8a-203ENSMUST00000108908 Ppp2r3dQ9Z176 491 aa11.88□□□□□ -0.51
Scn8a-203ENSMUST00000108908 Mmrn1B2RPV6 1210 aa11.88□□□□□ -0.51
Scn8a-203ENSMUST00000108908 P01734 135 aa11.88□□□□□ -0.51
Scn8a-203ENSMUST00000108908 Adssl1P28650 457 aa11.88□□□□□ -0.51
Scn8a-203ENSMUST00000108908 StamP70297 548 aa11.88□□□□□ -0.51
Scn8a-203ENSMUST00000108908 Uhmk1P97343 419 aa11.88□□□□□ -0.51
Scn8a-203ENSMUST00000108908 Sec31aQ3UPL0 1230 aaKnown RBP11.88□□□□□ -0.51
Scn8a-203ENSMUST00000108908 Gngt2Q61017 69 aa11.88□□□□□ -0.51
Scn8a-203ENSMUST00000108908 Cyp4f40G3UW81 524 aa11.88□□□□□ -0.51
Scn8a-203ENSMUST00000108908 PapolaQ61183 739 aa11.88□□□□□ -0.51
Scn8a-203ENSMUST00000108908 Armcx2Q6A058 784 aaKnown RBP11.88□□□□□ -0.51
Scn8a-203ENSMUST00000108908 Q80Y73 168 aa11.88□□□□□ -0.51
Scn8a-203ENSMUST00000108908 Klhl38Q8BSF5 581 aa11.88□□□□□ -0.51
Scn8a-203ENSMUST00000108908 Lig4Q8BTF7 911 aa11.88□□□□□ -0.51
Scn8a-203ENSMUST00000108908 Ces1fQ91WU0 561 aa11.88□□□□□ -0.51
Scn8a-203ENSMUST00000108908 Rnf6Q9DBU5 667 aa11.88□□□□□ -0.51
Scn8a-203ENSMUST00000108908 Mettl7bQ9DD20 244 aa11.88□□□□□ -0.51
Scn8a-203ENSMUST00000108908 TxnP10639 105 aaKnown RBP11.87□□□□□ -0.51
Scn8a-203ENSMUST00000108908 OatP29758 439 aa11.87□□□□□ -0.51
Scn8a-203ENSMUST00000108908 Kpna2P52293 529 aaKnown RBP11.87□□□□□ -0.51
Scn8a-203ENSMUST00000108908 Trerf1Q8BXJ2 1205 aa11.87□□□□□ -0.51
Retrieved 100 of 22,080 RNA–protein pairs in 19.6 ms