RNA–Protein interactions for RNA: ENST00000636214.1

PNKP-225, Transcript of polynucleotide kinase 3'-phosphatase, humanhuman

TSL 5

Gene PNKP, Length 805 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PNKP-225ENST00000636214 EPB41L2O43491 1005 aaKnown RBP20.41■□□□□ 0.86
PNKP-225ENST00000636214 ACTR2P61160 394 aa20.41■□□□□ 0.86
PNKP-225ENST00000636214 ADAM17P78536 824 aa20.41■□□□□ 0.86
PNKP-225ENST00000636214 LIN28BQ6ZN17 250 aaKnown RBP eCLIP20.41■□□□□ 0.86
PNKP-225ENST00000636214 PLA2G4DQ86XP0 818 aa20.41■□□□□ 0.86
PNKP-225ENST00000636214 CYP2W1Q8TAV3 490 aa20.41■□□□□ 0.86
PNKP-225ENST00000636214 MTUS1Q9ULD2 1270 aa20.41■□□□□ 0.86
PNKP-225ENST00000636214 MTCH2Q9Y6C9 303 aa20.41■□□□□ 0.86
PNKP-225ENST00000636214 EPOPA6NHQ4 379 aa20.4■□□□□ 0.86
PNKP-225ENST00000636214 DDX39AO00148 427 aaKnown RBP20.4■□□□□ 0.86
PNKP-225ENST00000636214 MEIS1O00470 390 aa20.4■□□□□ 0.86
PNKP-225ENST00000636214 BACH1O14867 736 aa20.4■□□□□ 0.86
PNKP-225ENST00000636214 PRPF3O43395 683 aaKnown RBP20.4■□□□□ 0.86
PNKP-225ENST00000636214 ARHGEF15O94989 841 aa20.4■□□□□ 0.86
PNKP-225ENST00000636214 ARP10275 920 aa20.4■□□□□ 0.86
PNKP-225ENST00000636214 CLK2P49760 499 aaKnown RBP20.4■□□□□ 0.86
PNKP-225ENST00000636214 STAT5BP51692 787 aa20.4■□□□□ 0.86
PNKP-225ENST00000636214 NID2Q14112 1375 aa20.4■□□□□ 0.86
PNKP-225ENST00000636214 AAK1Q2M2I8 961 aa20.4■□□□□ 0.86
PNKP-225ENST00000636214 FAM26DQ5JW98 314 aa20.4■□□□□ 0.86
PNKP-225ENST00000636214 FAM160B1Q5W0V3 765 aa20.4■□□□□ 0.86
PNKP-225ENST00000636214 RUFY4Q6ZNE9 571 aa20.4■□□□□ 0.86
PNKP-225ENST00000636214 NIPA1Q7RTP0 329 aa20.4■□□□□ 0.86
PNKP-225ENST00000636214 FBXL16Q8N461 479 aa20.4■□□□□ 0.86
PNKP-225ENST00000636214 YME1L1Q96TA2 773 aa20.4■□□□□ 0.86
PNKP-225ENST00000636214 SLC26A6Q9BXS9 759 aa20.4■□□□□ 0.86
PNKP-225ENST00000636214 AGO4Q9HCK5 861 aaKnown RBP20.4■□□□□ 0.86
PNKP-225ENST00000636214 LINC01553A4QN01 128 aa20.39■□□□□ 0.85
PNKP-225ENST00000636214 GHRP10912 638 aa20.39■□□□□ 0.85
PNKP-225ENST00000636214 POU3F3P20264 500 aaPredicted RBP20.39■□□□□ 0.85
PNKP-225ENST00000636214 SETQ01105 290 aaPredicted RBP20.39■□□□□ 0.85
PNKP-225ENST00000636214 GRB10Q13322 594 aa20.39■□□□□ 0.85
PNKP-225ENST00000636214 RPAINQ86UA6 219 aa20.39■□□□□ 0.85
PNKP-225ENST00000636214 TRIM22Q8IYM9 498 aa20.39■□□□□ 0.85
PNKP-225ENST00000636214 GDPD5Q8WTR4 605 aa20.39■□□□□ 0.85
PNKP-225ENST00000636214 PHKBQ93100 1093 aa20.39■□□□□ 0.85
PNKP-225ENST00000636214 RNF26Q9BY78 433 aaPredicted RBP20.39■□□□□ 0.85
PNKP-225ENST00000636214 ZMYND12Q9H0C1 365 aa20.39■□□□□ 0.85
PNKP-225ENST00000636214 CYP46A1Q9Y6A2 500 aa20.39■□□□□ 0.85
PNKP-225ENST00000636214 CPLX1O14810 134 aa20.38■□□□□ 0.85
PNKP-225ENST00000636214 UPP2O95045 317 aa20.38■□□□□ 0.85
PNKP-225ENST00000636214 INSRRP14616 1297 aa20.38■□□□□ 0.85
PNKP-225ENST00000636214 SLC26A2P50443 739 aa20.38■□□□□ 0.85
PNKP-225ENST00000636214 IER5Q5VY09 327 aa20.38■□□□□ 0.85
PNKP-225ENST00000636214 RUFY3Q7L099 469 aa20.38■□□□□ 0.85
PNKP-225ENST00000636214 PLPPR4Q7Z2D5 763 aa20.38■□□□□ 0.85
PNKP-225ENST00000636214 DNAJB3Q8WWF6 145 aa20.38■□□□□ 0.85
PNKP-225ENST00000636214 ASB2Q96Q27 587 aa20.38■□□□□ 0.85
PNKP-225ENST00000636214 FAM49AQ9H0Q0 323 aaPredicted RBP20.38■□□□□ 0.85
PNKP-225ENST00000636214 POTEB3A0JP26 581 aa20.37■□□□□ 0.85
PNKP-225ENST00000636214 MBLAC1A4D2B0 266 aaPredicted RBP20.37■□□□□ 0.85
PNKP-225ENST00000636214 ERVK-21P61565 698 aa20.37■□□□□ 0.85
PNKP-225ENST00000636214 ITGB3BPQ13352 177 aaPredicted RBP20.37■□□□□ 0.85
PNKP-225ENST00000636214 PLCB4Q15147 1175 aa20.37■□□□□ 0.85
PNKP-225ENST00000636214 CPLX2Q6PUV4 134 aaKnown RBP20.37■□□□□ 0.85
PNKP-225ENST00000636214 POTEBQ6S5H4 581 aa20.37■□□□□ 0.85
PNKP-225ENST00000636214 FBXO22Q8NEZ5 403 aa20.37■□□□□ 0.85
PNKP-225ENST00000636214 PCYT2Q99447 389 aa20.37■□□□□ 0.85
PNKP-225ENST00000636214 ZNF577Q9BSK1 485 aa20.37■□□□□ 0.85
PNKP-225ENST00000636214 AGXT2Q9BYV1 514 aa20.37■□□□□ 0.85
PNKP-225ENST00000636214 CDY2AQ9Y6F7 541 aa20.37■□□□□ 0.85
PNKP-225ENST00000636214 SIP14410 1827 aa20.37■□□□□ 0.85
PNKP-225ENST00000636214 COL4A4P53420 1690 aaPredicted RBP20.36■□□□□ 0.85
PNKP-225ENST00000636214 CHRNA1P02708 482 aa20.36■□□□□ 0.85
PNKP-225ENST00000636214 CYP3A4P08684 503 aa20.36■□□□□ 0.85
PNKP-225ENST00000636214 IFNAR1P17181 557 aa20.36■□□□□ 0.85
PNKP-225ENST00000636214 CCT2P78371 535 aaKnown RBP20.36■□□□□ 0.85
PNKP-225ENST00000636214 MRPS6P82932 125 aaKnown RBP20.36■□□□□ 0.85
PNKP-225ENST00000636214 PKN1Q16512 942 aa20.36■□□□□ 0.85
PNKP-225ENST00000636214 MIS18BP1Q6P0N0 1132 aa20.36■□□□□ 0.85
PNKP-225ENST00000636214 TOP1MTQ969P6 601 aa20.36■□□□□ 0.85
PNKP-225ENST00000636214 SAMD11Q96NU1 681 aa20.36■□□□□ 0.85
PNKP-225ENST00000636214 TBC1D22BQ9NU19 505 aa20.36■□□□□ 0.85
PNKP-225ENST00000636214 LMCD1Q9NZU5 365 aa20.36■□□□□ 0.85
PNKP-225ENST00000636214 COG5Q9UP83 839 aa20.36■□□□□ 0.85
PNKP-225ENST00000636214 IPO5O00410 1097 aaKnown RBP20.35■□□□□ 0.85
PNKP-225ENST00000636214 PPFIA3O75145 1194 aa20.35■□□□□ 0.85
PNKP-225ENST00000636214 PDIA3P30101 505 aaKnown RBP20.35■□□□□ 0.85
PNKP-225ENST00000636214 HTRA4P83105 476 aaPredicted RBP20.35■□□□□ 0.85
PNKP-225ENST00000636214 SSRP1Q08945 709 aaKnown RBP20.35■□□□□ 0.85
PNKP-225ENST00000636214 KRT40Q6A162 431 aa20.35■□□□□ 0.85
PNKP-225ENST00000636214 TSHZ1Q6ZSZ6 1077 aa20.35■□□□□ 0.85
PNKP-225ENST00000636214 SPRED2Q7Z698 418 aa20.35■□□□□ 0.85
PNKP-225ENST00000636214 CKAP2LQ8IYA6 745 aa20.35■□□□□ 0.85
PNKP-225ENST00000636214 NCOA5Q9HCD5 579 aaKnown RBP20.35■□□□□ 0.85
PNKP-225ENST00000636214 ZNF302Q9NR11 478 aa20.35■□□□□ 0.85
PNKP-225ENST00000636214 TRPV2Q9Y5S1 764 aa20.35■□□□□ 0.85
PNKP-225ENST00000636214 MYH9P35579 1960 aaKnown RBP20.35■□□□□ 0.85
PNKP-225ENST00000636214 FAM86B1E9PN63 330 aa20.34■□□□□ 0.85
PNKP-225ENST00000636214 HBP1O60381 514 aa20.34■□□□□ 0.85
PNKP-225ENST00000636214 FAM86B2P0C5J1 330 aa20.34■□□□□ 0.85
PNKP-225ENST00000636214 NLRP5P59047 1200 aa20.34■□□□□ 0.85
PNKP-225ENST00000636214 MGAT3Q09327 533 aa20.34■□□□□ 0.85
PNKP-225ENST00000636214 MKRN4PQ13434 485 aaPredicted RBP20.34■□□□□ 0.85
PNKP-225ENST00000636214 LPIN1Q14693 890 aa20.34■□□□□ 0.85
PNKP-225ENST00000636214 FBXO47Q5MNV8 452 aa20.34■□□□□ 0.85
PNKP-225ENST00000636214 MARCH8Q5T0T0 291 aa20.34■□□□□ 0.85
PNKP-225ENST00000636214 PDXDC2PQ6P474 469 aa20.34■□□□□ 0.85
PNKP-225ENST00000636214 ZSWIM6Q9HCJ5 1215 aa20.34■□□□□ 0.85
PNKP-225ENST00000636214 SH3GLB2Q9NR46 395 aa20.34■□□□□ 0.85
Retrieved 100 of 20,778 RNA–protein pairs in 14.8 ms