RNA–Protein interactions for RNA: ENST00000618207.4

CIITA-212, Transcript of class II major histocompatibility complex transactivator, humanhuman

TSL 5 BASIC

Gene CIITA, Length 2,844 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CIITA-212ENST00000618207 NMT1P30419 496 aaKnown RBP13.7□□□□□ -0.22
CIITA-212ENST00000618207 EIF4A3P38919 411 aaKnown RBP13.7□□□□□ -0.22
CIITA-212ENST00000618207 GMPSP49915 693 aaPredicted RBP13.7□□□□□ -0.22
CIITA-212ENST00000618207 POLR2FP61218 127 aaKnown RBP13.7□□□□□ -0.22
CIITA-212ENST00000618207 MTMR2Q13614 643 aa13.7□□□□□ -0.22
CIITA-212ENST00000618207 MYCT1Q8N699 235 aa13.7□□□□□ -0.22
CIITA-212ENST00000618207 ZKSCAN4Q969J2 545 aaPredicted RBP13.7□□□□□ -0.22
CIITA-212ENST00000618207 LSM14BQ9BX40 385 aaKnown RBP13.7□□□□□ -0.22
CIITA-212ENST00000618207 WDR11Q9BZH6 1224 aa13.7□□□□□ -0.22
CIITA-212ENST00000618207 KCTD10Q9H3F6 313 aa13.7□□□□□ -0.22
CIITA-212ENST00000618207 SH2D4AQ9H788 454 aa13.7□□□□□ -0.22
CIITA-212ENST00000618207 ZNF446Q9NWS9 450 aa13.7□□□□□ -0.22
CIITA-212ENST00000618207 PSME4Q14997 1843 aa13.69□□□□□ -0.22
CIITA-212ENST00000618207 PIK3CDO00329 1044 aa13.69□□□□□ -0.22
CIITA-212ENST00000618207 ZNF263O14978 683 aa13.69□□□□□ -0.22
CIITA-212ENST00000618207 EIF2AK2P19525 551 aaKnown RBP13.69□□□□□ -0.22
CIITA-212ENST00000618207 GRIPAP1Q4V328 841 aa13.69□□□□□ -0.22
CIITA-212ENST00000618207 HACL1Q9UJ83 578 aa13.69□□□□□ -0.22
CIITA-212ENST00000618207 FEM1BQ9UK73 627 aa13.69□□□□□ -0.22
CIITA-212ENST00000618207 PCDHB13Q9Y5F0 798 aa13.69□□□□□ -0.22
CIITA-212ENST00000618207 RHOXF2BP0C7M4 288 aa13.69□□□□□ -0.22
CIITA-212ENST00000618207 ACTN1P12814 892 aa13.69□□□□□ -0.22
CIITA-212ENST00000618207 CASP4P49662 377 aa13.69□□□□□ -0.22
CIITA-212ENST00000618207 CHMP4BP1P59074 171 aa13.69□□□□□ -0.22
CIITA-212ENST00000618207 SPP2Q13103 211 aa13.69□□□□□ -0.22
CIITA-212ENST00000618207 MEA1Q16626 185 aa13.69□□□□□ -0.22
CIITA-212ENST00000618207 MUM1L1Q5H9M0 696 aa13.69□□□□□ -0.22
CIITA-212ENST00000618207 RINT1Q6NUQ1 792 aa13.69□□□□□ -0.22
CIITA-212ENST00000618207 DHX30Q7L2E3 1194 aaKnown RBP eCLIP13.69□□□□□ -0.22
CIITA-212ENST00000618207 RETREG2Q8NC44 543 aa13.69□□□□□ -0.22
CIITA-212ENST00000618207 RHOXF2Q9BQY4 288 aa13.69□□□□□ -0.22
CIITA-212ENST00000618207 UNC45AQ9H3U1 944 aa13.69□□□□□ -0.22
CIITA-212ENST00000618207 CNOT7Q9UIV1 285 aaKnown RBP13.69□□□□□ -0.22
CIITA-212ENST00000618207 CDC23Q9UJX2 597 aa13.69□□□□□ -0.22
CIITA-212ENST00000618207 CTDP1Q9Y5B0 961 aaPredicted RBP13.69□□□□□ -0.22
CIITA-212ENST00000618207 PHF20L1A8MW92 1017 aa13.68□□□□□ -0.22
CIITA-212ENST00000618207 IPO5O00410 1097 aaKnown RBP13.68□□□□□ -0.22
CIITA-212ENST00000618207 CETN3O15182 167 aa13.68□□□□□ -0.22
CIITA-212ENST00000618207 FAM13AO94988 1023 aa13.68□□□□□ -0.22
CIITA-212ENST00000618207 MYCLP12524 364 aaPredicted RBP13.68□□□□□ -0.22
CIITA-212ENST00000618207 R3HDM1Q15032 1099 aaKnown RBP13.68□□□□□ -0.22
CIITA-212ENST00000618207 SPA17Q15506 151 aa13.68□□□□□ -0.22
CIITA-212ENST00000618207 NSMFQ6X4W1 530 aa13.68□□□□□ -0.22
CIITA-212ENST00000618207 FAM160B2Q86V87 743 aa13.68□□□□□ -0.22
CIITA-212ENST00000618207 SLC16A10Q8TF71 515 aa13.68□□□□□ -0.22
CIITA-212ENST00000618207 WNK4Q96J92 1243 aa13.68□□□□□ -0.22
CIITA-212ENST00000618207 PSMB7Q99436 277 aa13.68□□□□□ -0.22
CIITA-212ENST00000618207 DEFB129Q9H1M3 183 aa13.68□□□□□ -0.22
CIITA-212ENST00000618207 SORBS3O60504 671 aa13.68□□□□□ -0.22
CIITA-212ENST00000618207 PSMD10O75832 226 aa13.68□□□□□ -0.22
CIITA-212ENST00000618207 ATP1A1P05023 1023 aaKnown RBP13.68□□□□□ -0.22
CIITA-212ENST00000618207 CYP3A4P08684 503 aa13.68□□□□□ -0.22
CIITA-212ENST00000618207 ZSCAN20P17040 1043 aaPredicted RBP13.68□□□□□ -0.22
CIITA-212ENST00000618207 HOXD13P35453 343 aa13.68□□□□□ -0.22
CIITA-212ENST00000618207 KRT83P78385 493 aa13.68□□□□□ -0.22
CIITA-212ENST00000618207 MCTP2Q6DN12 878 aa13.68□□□□□ -0.22
CIITA-212ENST00000618207 CNPY4Q8N129 248 aa13.68□□□□□ -0.22
CIITA-212ENST00000618207 TEPSINQ96N21 525 aa13.68□□□□□ -0.22
CIITA-212ENST00000618207 PGAP2Q9UHJ9 254 aa13.68□□□□□ -0.22
CIITA-212ENST00000618207 ZNF536O15090 1300 aa13.68□□□□□ -0.22
CIITA-212ENST00000618207 TMEM150BA6NC51 233 aa13.68□□□□□ -0.22
CIITA-212ENST00000618207 KRT86O43790 486 aa13.68□□□□□ -0.22
CIITA-212ENST00000618207 TBC1D12O60347 775 aa13.68□□□□□ -0.22
CIITA-212ENST00000618207 ITGB5P18084 799 aa13.68□□□□□ -0.22
CIITA-212ENST00000618207 KIF11P52732 1056 aa13.68□□□□□ -0.22
CIITA-212ENST00000618207 GFPT1Q06210 699 aaPredicted RBP13.68□□□□□ -0.22
CIITA-212ENST00000618207 KCNH2Q12809 1159 aa13.68□□□□□ -0.22
CIITA-212ENST00000618207 RAPGEF1Q13905 1077 aa13.68□□□□□ -0.22
CIITA-212ENST00000618207 KNOP1Q1ED39 458 aaKnown RBP13.68□□□□□ -0.22
CIITA-212ENST00000618207 HSD17B14Q9BPX1 270 aa13.68□□□□□ -0.22
CIITA-212ENST00000618207 HINFPQ9BQA5 517 aa13.68□□□□□ -0.22
CIITA-212ENST00000618207 HAUS4Q9H6D7 363 aa13.68□□□□□ -0.22
CIITA-212ENST00000618207 MLXIPQ9HAP2 919 aa13.68□□□□□ -0.22
CIITA-212ENST00000618207 PLAGL2Q9UPG8 496 aa13.68□□□□□ -0.22
CIITA-212ENST00000618207 PITPNM2Q9BZ72 1349 aa13.67□□□□□ -0.22
CIITA-212ENST00000618207 EYA4O95677 639 aa13.67□□□□□ -0.22
CIITA-212ENST00000618207 DNA2P51530 1060 aa13.67□□□□□ -0.22
CIITA-212ENST00000618207 PRELPP51888 382 aa13.67□□□□□ -0.22
CIITA-212ENST00000618207 COG2Q14746 738 aa13.67□□□□□ -0.22
CIITA-212ENST00000618207 TNIP1Q15025 636 aa13.67□□□□□ -0.22
CIITA-212ENST00000618207 FKBP1CQ5VVH2 108 aa13.67□□□□□ -0.22
CIITA-212ENST00000618207 DLK2Q6UY11 383 aa13.67□□□□□ -0.22
CIITA-212ENST00000618207 DNAAF5Q86Y56 855 aa13.67□□□□□ -0.22
CIITA-212ENST00000618207 PRPF38AQ8NAV1 312 aaKnown RBP13.67□□□□□ -0.22
CIITA-212ENST00000618207 RDH13Q8NBN7 331 aa13.67□□□□□ -0.22
CIITA-212ENST00000618207 GOLGA1Q92805 767 aa13.67□□□□□ -0.22
CIITA-212ENST00000618207 IFIH1Q9BYX4 1025 aaKnown RBP13.67□□□□□ -0.22
CIITA-212ENST00000618207 ST7Q9NRC1 585 aa13.67□□□□□ -0.22
CIITA-212ENST00000618207 COL2A1P02458 1487 aaPredicted RBP13.67□□□□□ -0.22
CIITA-212ENST00000618207 RGPD3A6NKT7 1758 aaPredicted RBP13.67□□□□□ -0.22
CIITA-212ENST00000618207 RGPD4Q7Z3J3 1758 aa13.67□□□□□ -0.22
CIITA-212ENST00000618207 PCNTO95613 3336 aa13.67□□□□□ -0.22
CIITA-212ENST00000618207 H2AFXP16104 143 aaPredicted RBP13.67□□□□□ -0.22
CIITA-212ENST00000618207 NAP1L1P55209 391 aaKnown RBP13.67□□□□□ -0.22
CIITA-212ENST00000618207 MTMR14Q8NCE2 650 aa13.67□□□□□ -0.22
CIITA-212ENST00000618207 LXNQ9BS40 222 aa13.67□□□□□ -0.22
CIITA-212ENST00000618207 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP13.67□□□□□ -0.22
CIITA-212ENST00000618207 PARD6BQ9BYG5 372 aa13.67□□□□□ -0.22
CIITA-212ENST00000618207 DDX41Q9UJV9 622 aaKnown RBP13.67□□□□□ -0.22
CIITA-212ENST00000618207 AKAP3O75969 853 aa13.66□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 14.6 ms