RNA–Protein interactions for RNA: ENST00000595541.1

SIN3B-206, Transcript of SIN3 transcription regulator family member B, humanhuman

TSL 2 BASIC

Gene SIN3B, Length 2,767 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SIN3B-206ENST00000595541 ATP2C2O75185 946 aa18.01■□□□□ 0.47
SIN3B-206ENST00000595541 ADAM9Q13443 819 aa18.01■□□□□ 0.47
SIN3B-206ENST00000595541 NEDD1Q8NHV4 660 aa18.01■□□□□ 0.47
SIN3B-206ENST00000595541 LUC7LQ9NQ29 371 aaKnown RBP18.01■□□□□ 0.47
SIN3B-206ENST00000595541 HAUS2Q9NVX0 235 aa18.01■□□□□ 0.47
SIN3B-206ENST00000595541 MARSP56192 900 aaKnown RBP18.01■□□□□ 0.47
SIN3B-206ENST00000595541 MAGOHP61326 146 aaKnown RBP18.01■□□□□ 0.47
SIN3B-206ENST00000595541 SF3A3Q12874 501 aaKnown RBP eCLIP18.01■□□□□ 0.473e-10■■■□□ 15
SIN3B-206ENST00000595541 MAGOHBQ96A72 148 aaKnown RBP18.01■□□□□ 0.47
SIN3B-206ENST00000595541 BCAS3Q9H6U6 928 aa18.01■□□□□ 0.47
SIN3B-206ENST00000595541 ESYT2A0FGR8 921 aa18■□□□□ 0.47
SIN3B-206ENST00000595541 OPLAHO14841 1288 aa18■□□□□ 0.47
SIN3B-206ENST00000595541 CHUKO15111 745 aa18■□□□□ 0.47
SIN3B-206ENST00000595541 PPP1R11O60927 126 aaPredicted RBP18■□□□□ 0.47
SIN3B-206ENST00000595541 CUL1Q13616 776 aa18■□□□□ 0.47
SIN3B-206ENST00000595541 SLC10A5Q5PT55 438 aa18■□□□□ 0.47
SIN3B-206ENST00000595541 FOXR2Q6PJQ5 311 aa18■□□□□ 0.47
SIN3B-206ENST00000595541 CLEC4GQ6UXB4 293 aa18■□□□□ 0.47
SIN3B-206ENST00000595541 FUKQ8N0W3 1084 aa18■□□□□ 0.47
SIN3B-206ENST00000595541 TPCN2Q8NHX9 752 aa18■□□□□ 0.47
SIN3B-206ENST00000595541 CCDC114Q96M63 670 aa18■□□□□ 0.47
SIN3B-206ENST00000595541 CEP63Q96MT8 703 aa18■□□□□ 0.47
SIN3B-206ENST00000595541 SRRM3A6NNA2 597 aaPredicted RBP18■□□□□ 0.47
SIN3B-206ENST00000595541 PPP2R2AP63151 447 aa18■□□□□ 0.47
SIN3B-206ENST00000595541 ODF2Q5BJF6 829 aa18■□□□□ 0.47
SIN3B-206ENST00000595541 ANKRD20A8PQ5CZ79 823 aa18■□□□□ 0.47
SIN3B-206ENST00000595541 HERC4Q5GLZ8 1057 aaPredicted RBP18■□□□□ 0.47
SIN3B-206ENST00000595541 ALKBH5Q6P6C2 394 aaKnown RBP18■□□□□ 0.47
SIN3B-206ENST00000595541 CCDC121Q6ZUS5 278 aa18■□□□□ 0.47
SIN3B-206ENST00000595541 TMC3Q7Z5M5 1100 aa18■□□□□ 0.47
SIN3B-206ENST00000595541 MARCH10Q8NA82 808 aaPredicted RBP18■□□□□ 0.47
SIN3B-206ENST00000595541 DPH5Q9H2P9 285 aa18■□□□□ 0.47
SIN3B-206ENST00000595541 KIAA1024Q9UPX6 916 aa18■□□□□ 0.47
SIN3B-206ENST00000595541 MYH7BA7E2Y1 1941 aa17.99■□□□□ 0.47
SIN3B-206ENST00000595541 TMCO5BA8MYB1 307 aa17.99■□□□□ 0.47
SIN3B-206ENST00000595541 F8W031 263 aaPredicted RBP17.99■□□□□ 0.47
SIN3B-206ENST00000595541 KRIT1O00522 736 aa17.99■□□□□ 0.47
SIN3B-206ENST00000595541 UCHL3P15374 230 aa17.99■□□□□ 0.47
SIN3B-206ENST00000595541 GJB7Q6PEY0 223 aa17.99■□□□□ 0.47
SIN3B-206ENST00000595541 ARFGAP2Q8N6H7 521 aa17.99■□□□□ 0.47
SIN3B-206ENST00000595541 BUD13Q9BRD0 619 aaKnown RBP eCLIP17.99■□□□□ 0.477e-7■■□□□ 13.4
SIN3B-206ENST00000595541 EMILIN3Q9NT22 766 aa17.99■□□□□ 0.47
SIN3B-206ENST00000595541 DDX60LQ5H9U9 1706 aaKnown RBP17.99■□□□□ 0.47
SIN3B-206ENST00000595541 POTEB3A0JP26 581 aa17.99■□□□□ 0.47
SIN3B-206ENST00000595541 POTECB2RU33 542 aa17.99■□□□□ 0.47
SIN3B-206ENST00000595541 PGRMC1O00264 195 aaKnown RBP17.99■□□□□ 0.47
SIN3B-206ENST00000595541 TM4SF1P30408 202 aa17.99■□□□□ 0.47
SIN3B-206ENST00000595541 COPB2P35606 906 aa17.99■□□□□ 0.47
SIN3B-206ENST00000595541 ADCY7P51828 1080 aa17.99■□□□□ 0.47
SIN3B-206ENST00000595541 EIF6P56537 245 aaKnown RBP17.99■□□□□ 0.47
SIN3B-206ENST00000595541 ORC2Q13416 577 aaPredicted RBP17.99■□□□□ 0.47
SIN3B-206ENST00000595541 ARSHQ5FYA8 562 aa17.99■□□□□ 0.47
SIN3B-206ENST00000595541 SPTY2D1Q68D10 685 aaPredicted RBP17.99■□□□□ 0.47
SIN3B-206ENST00000595541 POTEBQ6S5H4 581 aa17.99■□□□□ 0.47
SIN3B-206ENST00000595541 C16orf86Q6ZW13 317 aa17.99■□□□□ 0.47
SIN3B-206ENST00000595541 LINC00116Q8NCU8 138 aa17.99■□□□□ 0.47
SIN3B-206ENST00000595541 LRRC45Q96CN5 670 aa17.99■□□□□ 0.47
SIN3B-206ENST00000595541 PBKQ96KB5 322 aa17.99■□□□□ 0.47
SIN3B-206ENST00000595541 RTFDC1Q9BY42 306 aaPredicted RBP17.99■□□□□ 0.47
SIN3B-206ENST00000595541 TRIM31Q9BZY9 425 aa17.99■□□□□ 0.47
SIN3B-206ENST00000595541 MAST2Q6P0Q8 1798 aa17.98■□□□□ 0.47
SIN3B-206ENST00000595541 BTNL10A8MVZ5 291 aa17.98■□□□□ 0.47
SIN3B-206ENST00000595541 CES2O00748 559 aa17.98■□□□□ 0.47
SIN3B-206ENST00000595541 BRD2P25440 801 aaKnown RBP17.98■□□□□ 0.47
SIN3B-206ENST00000595541 PPP4CP60510 307 aa17.98■□□□□ 0.47
SIN3B-206ENST00000595541 CYB5D1Q6P9G0 228 aa17.98■□□□□ 0.47
SIN3B-206ENST00000595541 LRRC47Q8N1G4 583 aaKnown RBP17.98■□□□□ 0.47
SIN3B-206ENST00000595541 EIF1ADQ8N9N8 165 aaKnown RBP17.98■□□□□ 0.47
SIN3B-206ENST00000595541 TRIM51Q9BSJ1 452 aa17.98■□□□□ 0.47
SIN3B-206ENST00000595541 STXBP5LQ9Y2K9 1186 aa17.98■□□□□ 0.47
SIN3B-206ENST00000595541 C5orf60A6NFR6 353 aa17.98■□□□□ 0.47
SIN3B-206ENST00000595541 HOXD13P35453 343 aa17.98■□□□□ 0.47
SIN3B-206ENST00000595541 SETQ01105 290 aaPredicted RBP17.98■□□□□ 0.47
SIN3B-206ENST00000595541 DHX9Q08211 1270 aaKnown RBP17.98■□□□□ 0.47
SIN3B-206ENST00000595541 PLCB4Q15147 1175 aa17.98■□□□□ 0.47
SIN3B-206ENST00000595541 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP17.98■□□□□ 0.474e-6■■■■■ 42.1
SIN3B-206ENST00000595541 TATDN2Q93075 761 aa17.98■□□□□ 0.47
SIN3B-206ENST00000595541 RAB34Q9BZG1 259 aa17.98■□□□□ 0.47
SIN3B-206ENST00000595541 ANKRD2Q9GZV1 360 aa17.98■□□□□ 0.47
SIN3B-206ENST00000595541 GPCPD1Q9NPB8 672 aa17.98■□□□□ 0.47
SIN3B-206ENST00000595541 SRP68Q9UHB9 627 aaKnown RBP17.98■□□□□ 0.47
SIN3B-206ENST00000595541 DDX25Q9UHL0 483 aaKnown RBP17.98■□□□□ 0.47
SIN3B-206ENST00000595541 GOLGA6L7A0A1B0GV03 622 aa17.97■□□□□ 0.47
SIN3B-206ENST00000595541 CCDC172P0C7W6 258 aa17.97■□□□□ 0.47
SIN3B-206ENST00000595541 CYP11B2P19099 503 aa17.97■□□□□ 0.47
SIN3B-206ENST00000595541 PON1P27169 355 aa17.97■□□□□ 0.47
SIN3B-206ENST00000595541 BIRC3Q13489 604 aa17.97■□□□□ 0.47
SIN3B-206ENST00000595541 PREPLQ4J6C6 727 aaPredicted RBP17.97■□□□□ 0.47
SIN3B-206ENST00000595541 UBAP2Q5T6F2 1119 aaKnown RBP17.97■□□□□ 0.47
SIN3B-206ENST00000595541 NLRP3Q96P20 1036 aa17.97■□□□□ 0.47
SIN3B-206ENST00000595541 ZHX3Q9H4I2 956 aa17.97■□□□□ 0.47
SIN3B-206ENST00000595541 HDAC9Q9UKV0 1011 aa17.97■□□□□ 0.47
SIN3B-206ENST00000595541 F8VZ95 297 aa17.97■□□□□ 0.47
SIN3B-206ENST00000595541 PLA2G4BP0C869 781 aa17.97■□□□□ 0.47
SIN3B-206ENST00000595541 NR2F2P24468 414 aa17.97■□□□□ 0.47
SIN3B-206ENST00000595541 SCTRP47872 440 aa17.97■□□□□ 0.47
SIN3B-206ENST00000595541 POU5F1Q01860 360 aaKnown RBP17.97■□□□□ 0.47
SIN3B-206ENST00000595541 GPBP1Q86WP2 473 aa17.97■□□□□ 0.47
SIN3B-206ENST00000595541 SPAG5Q96R06 1193 aa17.97■□□□□ 0.47
SIN3B-206ENST00000595541 TPX2Q9ULW0 747 aaKnown RBP17.97■□□□□ 0.47
Retrieved 100 of 20,778 RNA–protein pairs in 31.2 ms